3-39093498-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093498
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093498
    reference: chr 3
allele count: 1
allele frequency: 8.331805835596807e-6
allele num: 120022
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.-19C>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15687
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 2939
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3762
  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 1974
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16492
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8614
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.521653123953863e-5
  allele num: 65718
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

3-39093498-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093498
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093497
    reference: chr 3
allele count: 1
allele frequency: 8.331805835596807e-6
allele num: 120022
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.-17delG
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8614
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16492
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11524
  num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CG
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

3-39093499-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093499
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093499
    reference: chr 3
allele count: 1
allele frequency: 8.332361224523806e-6
allele num: 120014
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.-18G>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6397
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 880
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 6.062810719049351e-5
  allele num: 16494
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8614
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum

3-39093502-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093502
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093502
    reference: chr 3
allele count: 1
allele frequency: 8.331111703545721e-6
allele num: 120032
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.-15G>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2943
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.521329033043267e-5
  allele num: 65732
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10248
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 878
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-39093502-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093502
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093502
    reference: chr 3
allele count: 11
allele frequency: 9.164222873900293e-5
allele num: 120032
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.-15G>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.25e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15689
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8076
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4433
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3769
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27145
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10883
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6709
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8612
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11520
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6548
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

3-39093516-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093516
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093516
    reference: chr 3
allele count: 3
allele frequency: 2.498417668809754e-5
allele num: 120076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-168G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.-1G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.-1G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.-1G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.-1G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1648G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.-1G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.-1G>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10881
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

3-39093516-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093516
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093516
    reference: chr 3
allele count: 2
allele frequency: 1.665611779206503e-5
allele num: 120076
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.-1G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-168G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1648G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.-1G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.-1G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.-1G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.-1G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.-1G>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27318
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

3-39093525-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093525
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093525
    reference: chr 3
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.9C>T
  hgvsp: ENST00000433841.2:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.9C>T
  hgvsp: ENST00000420940.2:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.9C>T
  hgvsp: ENST00000544962.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1639C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.9C>T
  hgvsp: ENST00000302313.5:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.9C>T
  hgvsp: ENST00000423296.2:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.9C>T
  hgvsp: ENST00000413099.2:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-159C>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6392
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4420
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6697
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala3Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/3-39093536-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093536
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093536
    reference: chr 3
allele count: 2
allele frequency: 1.667027856035474e-5
allele num: 119974
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.20A>C
  hgvsp: ENSP00000445187.1:p.Gln7Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.20A>C
  hgvsp: ENSP00000406025.2:p.Gln7Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.20A>C
  hgvsp: ENSP00000388720.2:p.Gln7Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1628A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.20A>C
  hgvsp: ENSP00000415963.2:p.Gln7Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-148A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.20A>C
  hgvsp: ENSP00000307491.5:p.Gln7Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.20A>C
  hgvsp: ENSP00000401421.2:p.Gln7Pro
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22373
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27300
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2931
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln7Pro
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-39093536-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093536
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093536
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 119974
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-148A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.20A>G
  hgvsp: ENSP00000401421.2:p.Gln7Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.20A>G
  hgvsp: ENSP00000307491.5:p.Gln7Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.20A>G
  hgvsp: ENSP00000406025.2:p.Gln7Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.20A>G
  hgvsp: ENSP00000445187.1:p.Gln7Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1628A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.20A>G
  hgvsp: ENSP00000415963.2:p.Gln7Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.20A>G
  hgvsp: ENSP00000388720.2:p.Gln7Arg
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27300
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2931
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6698
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln7Arg
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD

3-39093543-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093543
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093543
    reference: chr 3
allele count: 3
allele frequency: 2.502293769288514e-5
allele num: 119890
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.27A>G
  hgvsp: ENST00000413099.2:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.27A>G
  hgvsp: ENST00000544962.1:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.27A>G
  hgvsp: ENST00000420940.2:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.27A>G
  hgvsp: ENST00000302313.5:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1621A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.27A>G
  hgvsp: ENST00000433841.2:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.27A>G
  hgvsp: ENST00000423296.2:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-141A>G
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2930
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr9Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

3-39093545-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093545
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093545
    reference: chr 3
allele count: 1
allele frequency: 8.341396683460679e-6
allele num: 119884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-139C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.29C>G
  hgvsp: ENSP00000388720.2:p.Ala10Gly
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1619C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.29C>G
  hgvsp: ENSP00000415963.2:p.Ala10Gly
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.29C>G
  hgvsp: ENSP00000445187.1:p.Ala10Gly
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.29C>G
  hgvsp: ENSP00000401421.2:p.Ala10Gly
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.29C>G
  hgvsp: ENSP00000406025.2:p.Ala10Gly
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.29C>G
  hgvsp: ENSP00000307491.5:p.Ala10Gly
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22371
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3756
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala10Gly
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

3-39093559-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093559
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093559
    reference: chr 3
allele count: 5
allele frequency: 4.181161359379181e-5
allele num: 119584
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.43G>A
  hgvsp: ENSP00000406025.2:p.Val15Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.43G>A
  hgvsp: ENSP00000401421.2:p.Val15Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.43G>A
  hgvsp: ENSP00000388720.2:p.Val15Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1605G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.43G>A
  hgvsp: ENSP00000445187.1:p.Val15Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.43G>A
  hgvsp: ENSP00000415963.2:p.Val15Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.43G>A
  hgvsp: ENSP00000307491.5:p.Val15Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-125G>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26838
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val15Met
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

3-39093561-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093561
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093561
    reference: chr 3
allele count: 2
allele frequency: 1.672996168838773e-5
allele num: 119546
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.45G>A
  hgvsp: ENST00000433841.2:c.45G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-123G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.45G>A
  hgvsp: ENST00000413099.2:c.45G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1603G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.45G>A
  hgvsp: ENST00000423296.2:c.45G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.45G>A
  hgvsp: ENST00000420940.2:c.45G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.45G>A
  hgvsp: ENST00000302313.5:c.45G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.45G>A
  hgvsp: ENST00000544962.1:c.45G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2919
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val15Val
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/3-39093571-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093571
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093571
    reference: chr 3
allele count: 1
allele frequency: 8.388698745050668e-6
allele num: 119208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+7A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+7A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+7A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+7A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+7A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+7A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+7A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+7A>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1567
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2909
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6689
  bin: 9.75e1
  variant carriers: 1
hgvs: c.48+7A>C
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

3-39093571-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093571
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093571
    reference: chr 3
allele count: 3
allele frequency: 2.5166096235152e-5
allele num: 119208
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+7A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+7A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+7A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+7A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+7A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+7A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+7A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+7A>G
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4363
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
hgvs: c.48+7A>G
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: A
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-39093573-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093573
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093573
    reference: chr 3
allele count: 195
allele frequency: 1.636784850926672e-3
allele num: 119136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+9G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+9G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+9G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+9G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+9G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+9G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+9G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+9G>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15519
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 21686
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 3.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1666
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3678
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 3
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/3-39093574-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093574
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093574
    reference: chr 3
allele count: 1
allele frequency: 8.402090440101497e-6
allele num: 119018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+10C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+10C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+10C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+10C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+10C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+10C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+10C>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25179
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10643
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum

3-39093574-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093574
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093574
    reference: chr 3
allele count: 3
allele frequency: 2.520627132030449e-5
allele num: 119018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+10C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+10C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+10C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+10C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+10C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+10C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+10C>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21587
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2901
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3682
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25179
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

3-39093579-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093579
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093579
    reference: chr 3
allele count: 1
allele frequency: 8.429002511842749e-6
allele num: 118638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+15T>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+15T>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+15T>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+15T>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+15T>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+15T>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+15T>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+15T>G
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3107
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4252
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6600
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ

3-39093584-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093584
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093584
    reference: chr 3
allele count: 22
allele frequency: 1.857794291504813e-4
allele num: 118420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+20C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+20C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+20C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+20C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+20C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+20C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+20C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+20C>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14984
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20561
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5924
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

3-39093584-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093584
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093584
    reference: chr 3
allele count: 3
allele frequency: 2.533355852052018e-5
allele num: 118420
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+20C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+20C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+20C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+20C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+20C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+20C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+20C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+20C>G
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3507
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9954
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23465
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

3-39093587-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093587
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093587
    reference: chr 3
allele count: 1
allele frequency: 8.452656669991378e-6
allele num: 118306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+23T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+23T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+23T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+23T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+23T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+23T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+23T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+23T>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2845
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2663
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/3-39093588-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093588
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093588
    reference: chr 3
allele count: 1
allele frequency: 8.459234946791412e-6
allele num: 118214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+24C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+24C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+24C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+24C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+24C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+24C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+24C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+24C>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14570
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9736
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

3-39093588-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093588
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093588
    reference: chr 3
allele count: 1
allele frequency: 8.459234946791412e-6
allele num: 118214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+24C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+24C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+24C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+24C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+24C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+24C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+24C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+24C>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14570
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21880
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ

3-39093593-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093593
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093593
    reference: chr 3
allele count: 1
allele frequency: 8.501666326600013e-6
allele num: 117624
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+29G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+29G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+29G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+29G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+29G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+29G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+29G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+29G>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13332
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3907
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19327
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

3-39093599-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093599
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093599
    reference: chr 3
allele count: 1
allele frequency: 8.520064752492119e-6
allele num: 117370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+35G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+35G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+35G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+35G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+35G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+35G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+35G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+35G>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6547
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5573
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3826
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2726
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

3-39093602-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093602
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093602
    reference: chr 3
allele count: 1
allele frequency: 8.567805613626239e-6
allele num: 116716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+38C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+38C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+38C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+38C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+38C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+38C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+38C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+38C>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10262
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6560
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13688
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3064
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

3-39093603-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093603
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093603
    reference: chr 3
allele count: 1
allele frequency: 8.586786652698828e-6
allele num: 116458
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+39G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+39G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+39G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+39G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+39G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+39G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+39G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+39G>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10065
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5897
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12530
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1923
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3306
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

3-39093611-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093611
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093611
    reference: chr 3
allele count: 1
allele frequency: 8.623514599610217e-6
allele num: 115962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+47C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+47C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+47C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+47C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+47C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+47C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+47C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+47C>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5043
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8383
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6553
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3493
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

3-39093612-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093612
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093612
    reference: chr 3
allele count: 1
allele frequency: 8.626490226186574e-6
allele num: 115922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+48G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+48G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+48G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+48G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+48G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+48G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+48G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+48G>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9886
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11187
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3690
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3494
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2496
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12030
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5681
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

3-39093614-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39093614
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39093614
    reference: chr 3
allele count: 1
allele frequency: 8.656659568205821e-6
allele num: 115518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-120+50G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.48+50G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.48+50G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.48+50G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1600+50G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.48+50G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.48+50G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+50G>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4814
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12593
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8143
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5216
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2472
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4469
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2471
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

3-39104492-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104492
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104492
    reference: chr 3
allele count: 1
allele frequency: 8.36638053645232e-6
allele num: 119526
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-49A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-49A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-49A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-49A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-49A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-49A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-49A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10928A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-49A>G
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2094
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4377
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

3-39104495-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104495
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104495
    reference: chr 3
allele count: 7
allele frequency: 5.854605065069754e-5
allele num: 119564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-46G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-46G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-46G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-46G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-46G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-46G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-46G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-46G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10931G>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8238
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5510
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-39104497-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104497
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104497
    reference: chr 3
allele count: 1
allele frequency: 8.358688020328329e-6
allele num: 119636
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-44A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-44A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-44A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-44A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-44A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-44A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10933A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-44A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-44A>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5629
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2098
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3005
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

3-39104497-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104497
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104497
    reference: chr 3
allele count: 166
allele frequency: 1.387542211374503e-3
allele num: 119636
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-44A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10933A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-44A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-44A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-44A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-44A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-44A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-44A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-44A>G
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 8453
  bin: 4.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 4601
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7201
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8236
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 3764
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3005
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

3-39104499-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104499
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104499
    reference: chr 3
allele count: 1
allele frequency: 8.35812911637859e-6
allele num: 119644
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-42G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-42G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-42G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-42G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-42G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-42G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10935G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-42G>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-42G>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3008
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3448
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

3-39104504-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104504
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104504
    reference: chr 3
allele count: 1
allele frequency: 8.355754608198667e-6
allele num: 119678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-37G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-37G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-37G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-37G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-37G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10940G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-37G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-37G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-37G>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

3-39104510-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104510
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104510
    reference: chr 3
allele count: 2
allele frequency: 1.668195846192343e-5
allele num: 119890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-31T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-31T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-31T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-31T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10946T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-31T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-31T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-31T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-31T>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7557
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

3-39104518-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104518
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104518
    reference: chr 3
allele count: 2
allele frequency: 1.664669063790118e-5
allele num: 120144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-23G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-23G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-23G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-23G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-23G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-23G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-23G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-23G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10954G>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

3-39104520-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104520
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104520
    reference: chr 3
allele count: 1
allele frequency: 8.312413758707254e-6
allele num: 120302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-21A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-21A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-21A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-21A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-21A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-21A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-21A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10956A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-21A>G
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3787
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

3-39104528-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104528
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104528
    reference: chr 3
allele count: 1
allele frequency: 8.287613333112331e-6
allele num: 120662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-13A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-13A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-13A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-13A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-13A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-13A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-13A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-13A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10964A>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3788
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/3-39104529-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104529
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104530
    reference: chr 3
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-11dupA
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-11dupA
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10966dupA
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-11dupA
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-11dupA
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-11dupA
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-11dupA
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-11dupA
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-11dupA
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8278
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9371
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

3-39104536-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104536
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104536
    reference: chr 3
allele count: 2
allele frequency: 1.653931394925738e-5
allele num: 120924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-5G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10972G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-5G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-5G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-5G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-5G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-5G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-5G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-5G>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
hgvs: c.49-5G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

3-39104536-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104536
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104536
    reference: chr 3
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.49-5G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.49-5G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.49-5G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-119-5G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.49-5G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-162-5G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10972G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.49-5G>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1599-5G>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3787
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: c.49-5G>T
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

3-39104548-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104548
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104548
    reference: chr 3
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.56A>G
  hgvsp: ENSP00000307491.5:p.Tyr19Cys
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.56A>G
  hgvsp: ENSP00000406025.2:p.Tyr19Cys
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.56A>G
  hgvsp: ENSP00000401421.2:p.Tyr19Cys
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.56A>G
  hgvsp: ENSP00000415963.2:p.Tyr19Cys
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10984A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1592A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-155A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.56A>G
  hgvsp: ENSP00000388720.2:p.Tyr19Cys
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-112A>G
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32860
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3072
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Tyr19Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

3-39104554-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104554
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104554
    reference: chr 3
allele count: 2
allele frequency: 1.65000165000165e-5
allele num: 121212
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-106T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.62T>C
  hgvsp: ENSP00000401421.2:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.62T>C
  hgvsp: ENSP00000406025.2:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.62T>C
  hgvsp: ENSP00000388720.2:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-149T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.62T>C
  hgvsp: ENSP00000415963.2:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.62T>C
  hgvsp: ENSP00000307491.5:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+10990T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1586T>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7235
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3236
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3475
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile21Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

3-39104564-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104564
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104564
    reference: chr 3
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.72A>G
  hgvsp: ENST00000413099.2:c.72A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.72A>G
  hgvsp: ENST00000420940.2:c.72A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.72A>G
  hgvsp: ENST00000433841.2:c.72A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11000A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.72A>G
  hgvsp: ENST00000423296.2:c.72A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.72A>G
  hgvsp: ENST00000302313.5:c.72A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-96A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1576A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-139A>G
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32861
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3788
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu24Glu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum

3-39104565-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104565
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104565
    reference: chr 3
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-95G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.73G>A
  hgvsp: ENSP00000307491.5:p.Val25Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1575G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.73G>A
  hgvsp: ENSP00000401421.2:p.Val25Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.73G>A
  hgvsp: ENSP00000415963.2:p.Val25Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.73G>A
  hgvsp: ENSP00000388720.2:p.Val25Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.73G>A
  hgvsp: ENSP00000406025.2:p.Val25Met
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-138G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11001G>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8277
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1807
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val25Met
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

3-39104567-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104567
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104567
    reference: chr 3
allele count: 3
allele frequency: 2.473859550747106e-5
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.75G>A
  hgvsp: ENST00000433841.2:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.75G>A
  hgvsp: ENST00000420940.2:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11003G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.75G>A
  hgvsp: ENST00000413099.2:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-136G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-93G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.75G>A
  hgvsp: ENST00000423296.2:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1573G>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.75G>A
  hgvsp: ENST00000302313.5:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val25Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ

3-39104572-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104572
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104572
    reference: chr 3
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.80A>G
  hgvsp: ENSP00000406025.2:p.Lys27Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-131A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11008A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-88A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1568A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.80A>G
  hgvsp: ENSP00000307491.5:p.Lys27Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.80A>G
  hgvsp: ENSP00000401421.2:p.Lys27Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.80A>G
  hgvsp: ENSP00000415963.2:p.Lys27Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.80A>G
  hgvsp: ENSP00000388720.2:p.Lys27Arg
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8278
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys27Arg
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-39104576-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104576
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104576
    reference: chr 3
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-84C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.84C>T
  hgvsp: ENST00000302313.5:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-127C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.84C>T
  hgvsp: ENST00000413099.2:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1564C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.84C>T
  hgvsp: ENST00000433841.2:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.84C>T
  hgvsp: ENST00000423296.2:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.84C>T
  hgvsp: ENST00000420940.2:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11012C>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10197
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Tyr28Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-39104594-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104594
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104594
    reference: chr 3
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11030T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.102T>C
  hgvsp: ENST00000423296.2:c.102T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.102T>C
  hgvsp: ENST00000433841.2:c.102T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.102T>C
  hgvsp: ENST00000420940.2:c.102T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1546T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-66T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.102T>C
  hgvsp: ENST00000302313.5:c.102T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-109T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.102T>C
  hgvsp: ENST00000413099.2:c.102T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8275
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn34Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

3-39104597-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104597
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104597
    reference: chr 3
allele count: 171
allele frequency: 1.409774436090225e-3
allele num: 121296
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.105T>C
  hgvsp: ENST00000302313.5:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-63T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1543T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.105T>C
  hgvsp: ENST00000423296.2:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11033T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.105T>C
  hgvsp: ENST00000433841.2:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.105T>C
  hgvsp: ENST00000420940.2:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.105T>C
  hgvsp: ENST00000413099.2:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-106T>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7195
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7087
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 9.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8452
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 8.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3066
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala35Ala
num of homozygotes: 1
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

3-39104598-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104598
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104598
    reference: chr 3
allele count: 3
allele frequency: 2.473247704001715e-5
allele num: 121298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.106C>T
  hgvsp: ENST00000420940.2:c.106C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.106C>T
  hgvsp: ENST00000413099.2:c.106C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11034C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-62C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.106C>T
  hgvsp: ENST00000423296.2:c.106C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-105C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.106C>T
  hgvsp: ENST00000302313.5:c.106C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1542C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.106C>T
  hgvsp: ENST00000433841.2:c.106C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3250
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu36Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

3-39104604-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104604
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104604
    reference: chr 3
allele count: 2
allele frequency: 1.648858989579211e-5
allele num: 121296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.112C>G
  hgvsp: ENSP00000406025.2:p.Leu38Val
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.112C>G
  hgvsp: ENSP00000415963.2:p.Leu38Val
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1536C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11040C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-99C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.112C>G
  hgvsp: ENSP00000388720.2:p.Leu38Val
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-56C>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.112C>G
  hgvsp: ENSP00000401421.2:p.Leu38Val
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.112C>G
  hgvsp: ENSP00000307491.5:p.Leu38Val
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu38Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

3-39104615-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104615
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104615
    reference: chr 3
allele count: 2
allele frequency: 1.648940555692967e-5
allele num: 121290
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.123A>G
  hgvsp: ENST00000302313.5:c.123A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.123A>G
  hgvsp: ENST00000420940.2:c.123A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1525A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-88A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.123A>G
  hgvsp: ENST00000423296.2:c.123A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-45A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11051A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.123A>G
  hgvsp: ENST00000413099.2:c.123A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.123A>G
  hgvsp: ENST00000433841.2:c.123A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10168
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3477
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala41Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

3-39104620-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104620
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104620
    reference: chr 3
allele count: 2
allele frequency: 1.648940555692967e-5
allele num: 121290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.128A>G
  hgvsp: ENSP00000388720.2:p.Asn43Ser
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1520A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.128A>G
  hgvsp: ENSP00000406025.2:p.Asn43Ser
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-40A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-83A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11056A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.128A>G
  hgvsp: ENSP00000401421.2:p.Asn43Ser
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.128A>G
  hgvsp: ENSP00000307491.5:p.Asn43Ser
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.128A>G
  hgvsp: ENSP00000415963.2:p.Asn43Ser
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3243
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32851
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Asn43Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

3-39104621-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104621
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104621
    reference: chr 3
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.129T>C
  hgvsp: ENST00000423296.2:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.129T>C
  hgvsp: ENST00000302313.5:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1519T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.129T>C
  hgvsp: ENST00000413099.2:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.129T>C
  hgvsp: ENST00000433841.2:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-39T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-82T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.129T>C
  hgvsp: ENST00000420940.2:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11057T>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3790
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn43Asn
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/3-39104625-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104625
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104625
    reference: chr 3
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.133C>A
  hgvsp: ENSP00000406025.2:p.Leu45Ile
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-35C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.133C>A
  hgvsp: ENSP00000388720.2:p.Leu45Ile
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.133C>A
  hgvsp: ENSP00000415963.2:p.Leu45Ile
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11061C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.133C>A
  hgvsp: ENSP00000307491.5:p.Leu45Ile
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.133C>A
  hgvsp: ENSP00000401421.2:p.Leu45Ile
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-78C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1515C>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu45Ile
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

3-39104629-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104629
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104629
    reference: chr 3
allele count: 2
allele frequency: 1.649538953862396e-5
allele num: 121246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-74T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.137T>A
  hgvsp: ENSP00000406025.2:p.Phe46Tyr
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11065T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.137T>A
  hgvsp: ENSP00000388720.2:p.Phe46Tyr
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1511T>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.137T>A
  hgvsp: ENSP00000415963.2:p.Phe46Tyr
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.137T>A
  hgvsp: ENSP00000401421.2:p.Phe46Tyr
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.137T>A
  hgvsp: ENSP00000307491.5:p.Phe46Tyr
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-31T>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3477
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Phe46Tyr
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-39104631-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104631
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104631
    reference: chr 3
allele count: 13
allele frequency: 1.075019846520243e-4
allele num: 120928
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1509A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.139A>C
  hgvsp: ENSP00000401421.2:p.Thr47Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.139A>C
  hgvsp: ENSP00000415963.2:p.Thr47Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.139A>C
  hgvsp: ENSP00000388720.2:p.Thr47Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.139A>C
  hgvsp: ENSP00000406025.2:p.Thr47Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11067A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-72A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.139A>C
  hgvsp: ENSP00000307491.5:p.Thr47Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-29A>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7089
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3776
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32748
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 1
hgvs: p.Thr47Pro
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

3-39104633-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104633
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104633
    reference: chr 3
allele count: 2
allele frequency: 1.649538953862396e-5
allele num: 121246
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.141A>G
  hgvsp: ENST00000302313.5:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-27A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11069A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.141A>G
  hgvsp: ENST00000420940.2:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-70A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1507A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.141A>G
  hgvsp: ENST00000413099.2:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.141A>G
  hgvsp: ENST00000423296.2:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.141A>G
  hgvsp: ENST00000433841.2:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3247
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr47Thr
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

3-39104636-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104636
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104636
    reference: chr 3
allele count: 3
allele frequency: 2.474512521033356e-5
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.144C>T
  hgvsp: ENST00000433841.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.144C>T
  hgvsp: ENST00000413099.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.144C>T
  hgvsp: ENST00000302313.5:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-67C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-24C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11072C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1504C>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.144C>T
  hgvsp: ENST00000423296.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.144C>T
  hgvsp: ENST00000420940.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala48Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/3-39104651-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104651
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104651
    reference: chr 3
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.159C>A
  hgvsp: ENST00000420940.2:c.159C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.159C>A
  hgvsp: ENST00000413099.2:c.159C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11087C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-9C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.159C>A
  hgvsp: ENST00000302313.5:c.159C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.159C>A
  hgvsp: ENST00000433841.2:c.159C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.159C>A
  hgvsp: ENST00000423296.2:c.159C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-52C>A
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1489C>A
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6921
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32850
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ile53Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

3-39104658-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104658
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104658
    reference: chr 3
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.166A>T
  hgvsp: ENSP00000401421.2:p.Ile56Leu
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1482A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.166A>T
  hgvsp: ENSP00000406025.2:p.Ile56Leu
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.166A>T
  hgvsp: ENSP00000388720.2:p.Ile56Leu
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.166A>T
  hgvsp: ENSP00000415963.2:p.Ile56Leu
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.-2A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.166A>T
  hgvsp: ENSP00000307491.5:p.Ile56Leu
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11094A>T
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-45A>T
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32850
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile56Leu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

3-39104661-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104661
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104661
    reference: chr 3
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.169T>C
  hgvsp: ENSP00000388720.2:p.Trp57Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.169T>C
  hgvsp: ENSP00000406025.2:p.Trp57Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-42T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.169T>C
  hgvsp: ENSP00000401421.2:p.Trp57Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1479T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.169T>C
  hgvsp: ENSP00000307491.5:p.Trp57Arg
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11097T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.2T>C
  hgvsp: ENSP00000379557.3:p.Met1?
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.169T>C
  hgvsp: ENSP00000415963.2:p.Trp57Arg
  variant of: http://identifiers.org/hgnc/30914
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32849
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3059
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD

3-39104671-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104671
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104671
    reference: chr 3
allele count: 10
allele frequency: 8.266785708380867e-5
allele num: 120966
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.179A>G
  hgvsp: ENSP00000388720.2:p.Asn60Ser
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-32A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11107A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.179A>G
  hgvsp: ENSP00000401421.2:p.Asn60Ser
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1469A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.179A>G
  hgvsp: ENSP00000307491.5:p.Asn60Ser
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.179A>G
  hgvsp: ENSP00000415963.2:p.Asn60Ser
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.12A>G
  hgvsp: ENST00000396258.3:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.179A>G
  hgvsp: ENSP00000406025.2:p.Asn60Ser
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32853
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn60Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-39104679-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104679
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104679
    reference: chr 3
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.187A>C
  hgvsp: ENSP00000406025.2:p.Lys63Gln
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.187A>C
  hgvsp: ENSP00000415963.2:p.Lys63Gln
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1461A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11115A>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.187A>C
  hgvsp: ENSP00000401421.2:p.Lys63Gln
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.187A>C
  hgvsp: ENSP00000388720.2:p.Lys63Gln
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.187A>C
  hgvsp: ENSP00000307491.5:p.Lys63Gln
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.20A>C
  hgvsp: ENSP00000379557.3:p.Gln7Pro
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-24A>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8278
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9462
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys63Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

3-39104686-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104686
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104686
    reference: chr 3
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11122T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.189+5T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.22+5T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.189+5T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.189+5T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.189+5T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1459+5T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-22+5T>C
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.189+5T>C
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
hgvs: c.189+5T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

3-39104689-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39104689
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 39104689
    reference: chr 3
allele count: 1
allele frequency: 8.286651861182008e-6
allele num: 120676
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000445187
  ensembl transcript: ENST00000544962
  gene symbol: WDR48
  hgvsc: ENST00000544962.1:c.48+11125A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000408160
  ensembl transcript: ENST00000418020
  gene symbol: WDR48
  hgvsc: ENST00000418020.1:c.-1459+8A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000379557
  ensembl transcript: ENST00000396258
  gene symbol: WDR48
  hgvsc: ENST00000396258.3:c.22+8A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000416900
  ensembl transcript: ENST00000441361
  gene symbol: WDR48
  hgvsc: ENST00000441361.1:c.-22+8A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000388720
  ensembl transcript: ENST00000413099
  gene symbol: WDR48
  hgvsc: ENST00000413099.2:c.189+8A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000415963
  ensembl transcript: ENST00000420940
  gene symbol: WDR48
  hgvsc: ENST00000420940.2:c.189+8A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000307491
  ensembl transcript: ENST00000302313
  gene symbol: WDR48
  hgvsc: ENST00000302313.5:c.189+8A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000406025
  ensembl transcript: ENST00000433841
  gene symbol: WDR48
  hgvsc: ENST00000433841.2:c.189+8A>G
  variant of: http://identifiers.org/hgnc/30914
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000114742
  ensembl protein: ENSP00000401421
  ensembl transcript: ENST00000423296
  gene symbol: WDR48
  hgvsc: ENST00000423296.2:c.189+8A>G
  variant of: http://identifiers.org/hgnc/30914
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.25e1
  variant carriers: 0
hgvs: c.189+8A>G
num of homozygotes: 0
reference allele: A

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

MQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

DP
type: SiteQuality
SIO_000300: 1.934616e6

FS
type: SiteQuality
SIO_000300: 7.14e-1

MQ
type: SiteQuality
SIO_000300: 6.117e1

QD
type: SiteQuality
SIO_000300: 1.141e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.75800156128025e-5
allele num: 10248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

MQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

FS
type: SiteQuality
SIO_000300: 7.14e-1

DP
type: SiteQuality
SIO_000300: 1.934616e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

MQ
type: SiteQuality
SIO_000300: 6.117e1

QD
type: SiteQuality
SIO_000300: 1.141e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.718e0

QD
type: SiteQuality
SIO_000300: 3.143e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 6.81e0

DP
type: SiteQuality
SIO_000300: 1.935009e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.707e0

QD
type: SiteQuality
SIO_000300: 1.16e1

VQSLOD
type: SiteQuality
SIO_000300: 3.17e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

FS
type: SiteQuality
SIO_000300: 1.135e0

DP
type: SiteQuality
SIO_000300: 1.935656e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.29e-1

African
type: Population
allele count: 10
allele frequency: 9.75800156128025e-4
allele num: 10248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65732
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.138952164009112e-3
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.64e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 1.135e0

DP
type: SiteQuality
SIO_000300: 1.935656e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.707e0

QD
type: SiteQuality
SIO_000300: 1.16e1

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4426
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27318
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3775
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6702
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1427
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 657
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.9296875e-4
allele num: 10240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.22e-1

QD
type: SiteQuality
SIO_000300: 1.021e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.936863e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

FS
type: SiteQuality
SIO_000300: 5.015e0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10881
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4426
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6702
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3775
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520820026158104e-5
allele num: 65754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.523925632429137e-4
allele num: 6562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.936863e6

FS
type: SiteQuality
SIO_000300: 5.015e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.021e1

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10882
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2938
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27319
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.773260359655981e-5
allele num: 10232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65718
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 1.936905e6

FS
type: SiteQuality
SIO_000300: 2.518e0

QD
type: SiteQuality
SIO_000300: 4.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.038e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 10891
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6698
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 99
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3758
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4404
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1424
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1974
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65692
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.736714136853074e-4
allele num: 11516
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 5.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.936479e6

VQSLOD
type: SiteQuality
SIO_000300: -1.156e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1424
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3758
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10891
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4404
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65692
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.156e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

DP
type: SiteQuality
SIO_000300: 1.936479e6

QD
type: SiteQuality
SIO_000300: 5.33e0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6697
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 10867
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3758
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.569966182250251e-5
allele num: 65646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.215e0

MQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

FS
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-2

MQ
type: SiteQuality
SIO_000300: 5.933e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.96e-1

QD
type: SiteQuality
SIO_000300: 8.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.934899e6

GenotypeQuality
all individuals: 155
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1420
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.571e0

DP
type: SiteQuality
SIO_000300: 1.934981e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 4.221e0

MQ
type: SiteQuality
SIO_000300: 5.881e1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.23e-1

QD
type: SiteQuality
SIO_000300: 1.003e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.02e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 181
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variant carriers: 0

GenotypeQuality
all individuals: 4377
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.635919364691509e-5
allele num: 65480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.131e1

FS
type: SiteQuality
SIO_000300: 4.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.047e0

DP
type: SiteQuality
SIO_000300: 1.928196e6

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 1972
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3721
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212268153715602e-4
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.48e-1

FS
type: SiteQuality
SIO_000300: 6.445e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.927073e6

VQSLOD
type: SiteQuality
SIO_000300: -1.483e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

MQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.627e0

QD
type: SiteQuality
SIO_000300: 9.76e0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1970
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4363
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variant carriers: 0

GenotypeQuality
all individuals: 10705
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.913148e6

MQ
type: SiteQuality
SIO_000300: 5.98e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

FS
type: SiteQuality
SIO_000300: 1.721e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

MQRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10705
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25826
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6689
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.596433167861739e-5
allele num: 65268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.293e1

FS
type: SiteQuality
SIO_000300: 1.721e0

MQRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.913148e6

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.47e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 192

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.213592233009709e-3
allele num: 16480
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 51
allele frequency: 4.44560669456067e-3
allele num: 11472
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 124
allele frequency: 1.901082390457793e-3
allele num: 65226
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.21e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.92e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

VQSLOD
type: SiteQuality
SIO_000300: 4.4e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.61e-1

DP
type: SiteQuality
SIO_000300: 1.912916e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2901
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
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South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

FS
type: SiteQuality
SIO_000300: 5.451e0

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 1.903315e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.222e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.907e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6609
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variant carriers: 3

GenotypeQuality
all individuals: 1963
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variant carriers: 0

GenotypeQuality
all individuals: 10643
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534730961662421e-5
allele num: 65158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.992428770671449e-4
allele num: 10038
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.907e0

DP
type: SiteQuality
SIO_000300: 1.903315e6

MQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

FS
type: SiteQuality
SIO_000300: 5.451e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.222e1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23632
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1957
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2873
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1399
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53997782431933e-5
allele num: 64936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -7.258e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.879695e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4216
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6606
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2426
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9954
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2852
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23465
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64796
num of homozygotes: 0

African
type: Population
allele count: 22
allele frequency: 2.209278971681061e-3
allele num: 9958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

DP
type: SiteQuality
SIO_000300: 1.869966e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

QD
type: SiteQuality
SIO_000300: 1.369e1

GenotypeQuality
all individuals: 714
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2852
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2426
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1129
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6606
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 245
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4216
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.629915426878203e-5
allele num: 64796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9958
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.369e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 1.869966e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
all individuals: 1396
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4195
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22892
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6579
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 900
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1951
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9887
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3475
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545212930341801e-5
allele num: 64716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

DP
type: SiteQuality
SIO_000300: 1.855491e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.45e-1

FS
type: SiteQuality
SIO_000300: 4.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 9.92e0

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6580
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1107
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4185
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
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variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
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variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3454
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21880
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2836
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.008064516129032e-4
allele num: 9920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64658
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.844325e6

FS
type: SiteQuality
SIO_000300: 4.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.404e0

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-1

QD
type: SiteQuality
SIO_000300: 1.143e1

GenotypeQuality
all individuals: 4185
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3454
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2836
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6580
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9736
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64658
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.844325e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.404e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

QD
type: SiteQuality
SIO_000300: 1.143e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 4.3e0

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3193
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6570
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2469
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8329
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1537
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3100
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555548642006035e-5
allele num: 64286
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.144e0

QD
type: SiteQuality
SIO_000300: 1.737e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.52e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: -1.496e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.88e-1

DP
type: SiteQuality
SIO_000300: 1.793387e6

GenotypeQuality
all individuals: 194
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3425
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7764
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2732
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1380
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2981
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6564
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559770401796856e-5
allele num: 64112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.11e-1

FS
type: SiteQuality
SIO_000300: 2.417e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: -5.795e-1

DP
type: SiteQuality
SIO_000300: 1.756943e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3926
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1348
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3325
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3555
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6031
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3540
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1923
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2657
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.838607035531201e-5
allele num: 11314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63700
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.655e1

VQSLOD
type: SiteQuality
SIO_000300: -1.512e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e0

InbreedingCoeff
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SIO_000300: -1.8e-3

DP
type: SiteQuality
SIO_000300: 1.69814e6

FS
type: SiteQuality
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MQRankSum
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SIO_000300: 1.02e0

ClippingRankSum
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SIO_000300: -1.736e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9680
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.573613646377541e-5
allele num: 63548
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.072e0

VQSLOD
type: SiteQuality
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DP
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BaseQRankSum
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SIO_000300: -2.132e0

QD
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SIO_000300: 8.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.74e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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SIO_000300: -2.24e-1

MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.582128278960858e-5
allele num: 63206
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11274
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6192
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e0

InbreedingCoeff
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SIO_000300: 2.9e-3

FS
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SIO_000300: 0.0e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.656884e6

VQSLOD
type: SiteQuality
SIO_000300: 3.31e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6192
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.58247879478415e-5
allele num: 63192
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 8.699999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.36e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.98e-1

MQ
type: SiteQuality
SIO_000300: 5.788e1

QD
type: SiteQuality
SIO_000300: 2.143e1

VQSLOD
type: SiteQuality
SIO_000300: -7.375e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.588663298700473e-5
allele num: 62946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

BaseQRankSum
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SIO_000300: -3.518e0

VQSLOD
type: SiteQuality
SIO_000300: -7.613e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.644857e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.828975820719482e-5
allele num: 10174
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66150
num of homozygotes: 0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.558121957855912e-5
allele num: 66154
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.964250638381458e-4
allele num: 10182
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
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InbreedingCoeff
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MQ
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BaseQRankSum
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DP
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511304558094547e-5
allele num: 66168
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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South Asian
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MQRankSum
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
type: SiteQuality
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FS
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MQ
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 166

Latino
type: Population
allele count: 3
allele frequency: 2.60778859527121e-4
allele num: 11504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 2.557217747091165e-4
allele num: 15642
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African
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allele count: 153
allele frequency: 1.501766784452297e-2
allele num: 10188
num of homozygotes: 0

East Asian
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allele num: 8630
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Other
type: Population
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allele frequency: 0.0e0
allele num: 894
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European (Non-Finnish)
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allele count: 6
allele frequency: 9.067827348567283e-5
allele num: 66168
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511076188461422e-5
allele num: 66178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15638
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.29e0

FS
type: SiteQuality
SIO_000300: 2.98e0

VQSLOD
type: SiteQuality
SIO_000300: -1.314e0

DP
type: SiteQuality
SIO_000300: 2.563726e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.119e0

QD
type: SiteQuality
SIO_000300: 1.107e1

GenotypeQuality
all individuals: 391
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6723
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511350240304688e-5
allele num: 66166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15676
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.43e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.27e-1

FS
type: SiteQuality
SIO_000300: 8.558999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.378e0

DP
type: SiteQuality
SIO_000300: 2.572266e6

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.837e0

MQ
type: SiteQuality
SIO_000300: 5.602e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.63e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.267748478701826e-4
allele num: 15776
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.580044e6

FS
type: SiteQuality
SIO_000300: 1.581e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.595e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.791e0

VQSLOD
type: SiteQuality
SIO_000300: 5.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 308
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508614187007815e-5
allele num: 66286
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.72951936174353e-5
allele num: 10278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.59045e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.62e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.192e0

QD
type: SiteQuality
SIO_000300: 1.514e1

GenotypeQuality
all individuals: 3058
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3476
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GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50779530170984e-5
allele num: 66322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.242e0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.71e-1

QD
type: SiteQuality
SIO_000300: 1.315e1

VQSLOD
type: SiteQuality
SIO_000300: 5.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e0

MQ
type: SiteQuality
SIO_000300: 5.918e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.52e-1

DP
type: SiteQuality
SIO_000300: 2.593542e6

GenotypeQuality
all individuals: 1779
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.659969088098918e-5
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.727e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

DP
type: SiteQuality
SIO_000300: 2.601684e6

FS
type: SiteQuality
SIO_000300: 1.1546e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.801e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

QD
type: SiteQuality
SIO_000300: 1.109e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505661286437003e-5
allele num: 66416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

MQ
type: SiteQuality
SIO_000300: 6.042e1

DP
type: SiteQuality
SIO_000300: 2.602759e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503623733197005e-5
allele num: 66506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.677542519958348e-5
allele num: 11524
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.049e0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.308e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.364e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.95e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503623733197005e-5
allele num: 66506
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.122e1

FS
type: SiteQuality
SIO_000300: 7.308e0

VQSLOD
type: SiteQuality
SIO_000300: 3.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.364e0

MQRankSum
type: SiteQuality
SIO_000300: -1.049e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
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SIO_000300: -4.95e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 2.607341e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.227e0

ClippingRankSum
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SIO_000300: 2.6e-2

QD
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InbreedingCoeff
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SIO_000300: -2.0e-4

BaseQRankSum
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SIO_000300: 7.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.08e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
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QD
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.196e0

DP
type: SiteQuality
SIO_000300: 2.611834e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.7e0

QD
type: SiteQuality
SIO_000300: 1.035e1

VQSLOD
type: SiteQuality
SIO_000300: -1.541e0

DP
type: SiteQuality
SIO_000300: 2.612714e6

FS
type: SiteQuality
SIO_000300: 2.464e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.037e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

QD
type: SiteQuality
SIO_000300: 8.24e0

FS
type: SiteQuality
SIO_000300: 3.529e0

DP
type: SiteQuality
SIO_000300: 2.612767e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.75e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.499640028797696e-5
allele num: 66672
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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FS
type: SiteQuality
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DP
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ClippingRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 5.986e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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African
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Latino
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South Asian
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Other
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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MQ
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InbreedingCoeff
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
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African
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East Asian
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European (Finnish)
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.956e1

QD
type: SiteQuality
SIO_000300: 1.438e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

VQSLOD
type: SiteQuality
SIO_000300: -2.285e-1

FS
type: SiteQuality
SIO_000300: 8.195e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

DP
type: SiteQuality
SIO_000300: 2.61339e6

MQRankSum
type: SiteQuality
SIO_000300: -8.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

GenotypeQuality
all individuals: 32920
bin: 9.75e1
variant carriers: 170

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.600104004160167e-4
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.42306760358614e-4
allele num: 16508
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.049632628579997e-4
allele num: 66690
num of homozygotes: 0

African
type: Population
allele count: 157
allele frequency: 1.510777521170131e-2
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.37e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 4.87e0

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

DP
type: SiteQuality
SIO_000300: 2.624209e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.08e-1

QD
type: SiteQuality
SIO_000300: 1.472e1

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2114
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 7.361e0

MQRankSum
type: SiteQuality
SIO_000300: 9.66e-1

QD
type: SiteQuality
SIO_000300: 1.489e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.444e0

DP
type: SiteQuality
SIO_000300: 2.614427e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.731e0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3477
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32851
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998770504093322e-5
allele num: 66694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.926e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.707e0

FS
type: SiteQuality
SIO_000300: 1.0866e1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.773e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.614257e6

QD
type: SiteQuality
SIO_000300: 1.206e1

GenotypeQuality
all individuals: 32852
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3072
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3790
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 2114
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998590662388677e-5
allele num: 66698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

FS
type: SiteQuality
SIO_000300: 7.039e0

MQRankSum
type: SiteQuality
SIO_000300: -2.93e-1

QD
type: SiteQuality
SIO_000300: 1.091e1

VQSLOD
type: SiteQuality
SIO_000300: 6.04e-1

DP
type: SiteQuality
SIO_000300: 2.61415e6

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10179
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 3477
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 1807
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3072
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.614084e6

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 2.969e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.606e0

QD
type: SiteQuality
SIO_000300: 1.717e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.08e0

VQSLOD
type: SiteQuality
SIO_000300: -5.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e0

GenotypeQuality
all individuals: 3477
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 10168
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 32850
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.35e-1

FS
type: SiteQuality
SIO_000300: 1.785e0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: -2.316e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

DP
type: SiteQuality
SIO_000300: 2.614127e6

QD
type: SiteQuality
SIO_000300: 2.251e1

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3068
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variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

DP
type: SiteQuality
SIO_000300: 2.613927e6

QD
type: SiteQuality
SIO_000300: 1.271e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

FS
type: SiteQuality
SIO_000300: 4.084e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.926e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 3790
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.313208420078649e-4
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.137e1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-1

DP
type: SiteQuality
SIO_000300: 2.614206e6

FS
type: SiteQuality
SIO_000300: 3.98e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Non-Finnish)
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African
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allele num: 10252
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Latino
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European (Finnish)
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East Asian
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MQRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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FS
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VQSLOD
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MQ
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.999670036296008e-5
allele num: 66674
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FS
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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ClippingRankSum
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QD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.499970000599988e-5
allele num: 66668
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South Asian
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Other
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African
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Latino
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DP
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ReadPosRankSum
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QD
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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South Asian
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allele frequency: 6.064281382656155e-5
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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VQSLOD
type: SiteQuality
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MQ
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DP
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ReadPosRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11530
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Other
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East Asian
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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InbreedingCoeff
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DP
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QD
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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East Asian
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African
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FS
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DP
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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East Asian
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South Asian
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Other
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European (Finnish)
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FS
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VQSLOD
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DP
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QD
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BaseQRankSum
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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East Asian
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South Asian
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Other
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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MQRankSum
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FS
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InbreedingCoeff
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QD
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VQSLOD
type: SiteQuality
SIO_000300: 4.99e-1

GenotypeQuality
all individuals: 9201
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3792
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3476
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3049
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32851
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505208019748329e-5
allele num: 66436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.13e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

DP
type: SiteQuality
SIO_000300: 2.604527e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.55e-1

QD
type: SiteQuality
SIO_000300: 1.148e1

FS
type: SiteQuality
SIO_000300: 2.565e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.02e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0