1-144854615-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854615
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854615
    reference: chr 1
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7110A>G
  hgvsp: ENST00000530740.1:c.7110A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7263A>G
  hgvsp: ENST00000369359.4:c.7263A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.387A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.255A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4289A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6855A>G
  hgvsp: ENST00000369356.4:c.6855A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6855A>G
  hgvsp: ENST00000369354.3:c.6855A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6537A>G
  hgvsp: ENST00000313382.9:c.6537A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*358A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45095
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys2285Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

1-144854617-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854617
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854617
    reference: chr 1
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6853A>T
  hgvsp: ENSP00000358360.3:p.Lys2285Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6535A>T
  hgvsp: ENSP00000327209.9:p.Lys2179Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7108A>T
  hgvsp: ENSP00000435654.1:p.Lys2370Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*356A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.385A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6853A>T
  hgvsp: ENSP00000358363.4:p.Lys2285Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7261A>T
  hgvsp: ENSP00000358366.4:p.Lys2421Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.253A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4287A>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45094
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys2285Ter
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

1-144854620-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854620
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854620
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.382A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*353A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6850A>G
  hgvsp: ENSP00000358363.4:p.Thr2284Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.250A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7258A>G
  hgvsp: ENSP00000358366.4:p.Thr2420Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6532A>G
  hgvsp: ENSP00000327209.9:p.Thr2178Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7105A>G
  hgvsp: ENSP00000435654.1:p.Thr2369Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4284A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6850A>G
  hgvsp: ENSP00000358360.3:p.Thr2284Ala
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45094
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr2284Ala
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

1-144854622-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854622
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854622
    reference: chr 1
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.380G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6848G>C
  hgvsp: ENSP00000358360.3:p.Arg2283Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7256G>C
  hgvsp: ENSP00000358366.4:p.Arg2419Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6530G>C
  hgvsp: ENSP00000327209.9:p.Arg2177Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6848G>C
  hgvsp: ENSP00000358363.4:p.Arg2283Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4282G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*351G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7103G>C
  hgvsp: ENSP00000435654.1:p.Arg2368Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.248G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45093
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg2283Thr
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

1-144854627-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854627
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854627
    reference: chr 1
allele count: 3
allele frequency: 2.471088267272907e-5
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6843A>G
  hgvsp: ENST00000369354.3:c.6843A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.243A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7098A>G
  hgvsp: ENST00000530740.1:c.7098A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6843A>G
  hgvsp: ENST00000369356.4:c.6843A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7251A>G
  hgvsp: ENST00000369359.4:c.7251A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.375A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*346A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4277A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6525A>G
  hgvsp: ENST00000313382.9:c.6525A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45089
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu2281Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff

1-144854630-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854630
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854630
    reference: chr 1
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6522G>A
  hgvsp: ENST00000313382.9:c.6522G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6840G>A
  hgvsp: ENST00000369354.3:c.6840G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7248G>A
  hgvsp: ENST00000369359.4:c.7248G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.240G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7095G>A
  hgvsp: ENST00000530740.1:c.7095G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4274G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*343G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6840G>A
  hgvsp: ENST00000369356.4:c.6840G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.372G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45087
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu2280Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

1-144854632-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854632
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854632
    reference: chr 1
allele count: 11
allele frequency: 9.060955518945634e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6520C>G
  hgvsp: ENSP00000327209.9:p.Leu2174Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4272C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7246C>G
  hgvsp: ENSP00000358366.4:p.Leu2416Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6838C>G
  hgvsp: ENSP00000358363.4:p.Leu2280Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*341C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.370C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7093C>G
  hgvsp: ENSP00000435654.1:p.Leu2365Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6838C>G
  hgvsp: ENSP00000358360.3:p.Leu2280Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.238C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45087
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59392
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu2280Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

1-144854632-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854632
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854632
    reference: chr 1
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7093C>A
  hgvsp: ENSP00000435654.1:p.Leu2365Met
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.238C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7246C>A
  hgvsp: ENSP00000358366.4:p.Leu2416Met
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4272C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6838C>A
  hgvsp: ENSP00000358360.3:p.Leu2280Met
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.370C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6838C>A
  hgvsp: ENSP00000358363.4:p.Leu2280Met
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6520C>A
  hgvsp: ENSP00000327209.9:p.Leu2174Met
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*341C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45087
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu2280Met
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-144854634-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854634
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854634
    reference: chr 1
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7244T>G
  hgvsp: ENSP00000358366.4:p.Leu2415Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6836T>G
  hgvsp: ENSP00000358360.3:p.Leu2279Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7091T>G
  hgvsp: ENSP00000435654.1:p.Leu2364Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*339T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6836T>G
  hgvsp: ENSP00000358363.4:p.Leu2279Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.236T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6518T>G
  hgvsp: ENSP00000327209.9:p.Leu2173Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.368T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4270T>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45083
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu2279Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum

1-144854636-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854636
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854636
    reference: chr 1
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7089A>T
  hgvsp: ENSP00000435654.1:p.Glu2363Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6516A>T
  hgvsp: ENSP00000327209.9:p.Glu2172Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4268A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*337A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.234A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6834A>T
  hgvsp: ENSP00000358360.3:p.Glu2278Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7242A>T
  hgvsp: ENSP00000358366.4:p.Glu2414Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.366A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6834A>T
  hgvsp: ENSP00000358363.4:p.Glu2278Asp
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45081
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu2278Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

1-144854638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854638
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854638
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6832G>A
  hgvsp: ENSP00000358360.3:p.Glu2278Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.364G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*335G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6832G>A
  hgvsp: ENSP00000358363.4:p.Glu2278Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6514G>A
  hgvsp: ENSP00000327209.9:p.Glu2172Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7240G>A
  hgvsp: ENSP00000358366.4:p.Glu2414Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7087G>A
  hgvsp: ENSP00000435654.1:p.Glu2363Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4266G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.232G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45081
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu2278Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-144854641-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854641
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854641
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.229A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6511A>G
  hgvsp: ENSP00000327209.9:p.Arg2171Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.361A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6829A>G
  hgvsp: ENSP00000358363.4:p.Arg2277Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6829A>G
  hgvsp: ENSP00000358360.3:p.Arg2277Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*332A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4263A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7084A>G
  hgvsp: ENSP00000435654.1:p.Arg2362Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7237A>G
  hgvsp: ENSP00000358366.4:p.Arg2413Gly
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45080
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg2277Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-144854641-TTTCTGTTGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854641
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854632
    reference: chr 1
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsp: ENSP00000435654.1:p.Ser2359_Glu2361del
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsp: ENSP00000358360.3:p.Ser2274_Glu2276del
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.220_228delTCAACAGAA
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsp: ENSP00000358366.4:p.Ser2410_Glu2412del
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.352_360delTCAACAGAA
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsp: ENSP00000327209.9:p.Ser2168_Glu2170del
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsp: ENSP00000358363.4:p.Ser2274_Glu2276del
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45080
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser2274_Glu2276del
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: TTTCTGTTGA
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

1-144854645-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854645
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854645
    reference: chr 1
allele count: 346
allele frequency: 2.851538677083848e-3
allele num: 121338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*328A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7233A>G
  hgvsp: ENST00000369359.4:c.7233A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6825A>G
  hgvsp: ENST00000369356.4:c.6825A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6507A>G
  hgvsp: ENST00000313382.9:c.6507A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.225A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6825A>G
  hgvsp: ENST00000369354.3:c.6825A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4259A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7080A>G
  hgvsp: ENST00000530740.1:c.7080A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.357A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45079
  bin: 9.75e1
  variant carriers: 345
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr2275Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP

1-144854646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854646
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854646
    reference: chr 1
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6824C>T
  hgvsp: ENSP00000358363.4:p.Thr2275Ile
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7232C>T
  hgvsp: ENSP00000358366.4:p.Thr2411Ile
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.224C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.356C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7079C>T
  hgvsp: ENSP00000435654.1:p.Thr2360Ile
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6824C>T
  hgvsp: ENSP00000358360.3:p.Thr2275Ile
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4258C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6506C>T
  hgvsp: ENSP00000327209.9:p.Thr2169Ile
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*327C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44994
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr2275Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-144854646-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854646
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854646
    reference: chr 1
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7232C>A
  hgvsp: ENSP00000358366.4:p.Thr2411Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6824C>A
  hgvsp: ENSP00000358363.4:p.Thr2275Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*327C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4258C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.224C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.356C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7079C>A
  hgvsp: ENSP00000435654.1:p.Thr2360Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6824C>A
  hgvsp: ENSP00000358360.3:p.Thr2275Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6506C>A
  hgvsp: ENSP00000327209.9:p.Thr2169Lys
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44994
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr2275Lys
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD

1-144854647-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854647
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854647
    reference: chr 1
allele count: 32
allele frequency: 2.636522426918894e-4
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4257A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6823A>T
  hgvsp: ENSP00000358363.4:p.Thr2275Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.223A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7231A>T
  hgvsp: ENSP00000358366.4:p.Thr2411Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6505A>T
  hgvsp: ENSP00000327209.9:p.Thr2169Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7078A>T
  hgvsp: ENSP00000435654.1:p.Thr2360Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*326A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6823A>T
  hgvsp: ENSP00000358360.3:p.Thr2275Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.355A>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44995
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr2275Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-144854648-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854648
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854648
    reference: chr 1
allele count: 5
allele frequency: 4.118412599047823e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7230A>G
  hgvsp: ENST00000369359.4:c.7230A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6822A>G
  hgvsp: ENST00000369356.4:c.6822A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.354A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7077A>G
  hgvsp: ENST00000530740.1:c.7077A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*325A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6822A>G
  hgvsp: ENST00000369354.3:c.6822A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4256A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6504A>G
  hgvsp: ENST00000313382.9:c.6504A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.222A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44977
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser2274Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

1-144854656-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854656
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854656
    reference: chr 1
allele count: 3
allele frequency: 2.471006852925672e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814G>A
  hgvsp: ENSP00000358363.4:p.Gly2272Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069G>A
  hgvsp: ENSP00000435654.1:p.Gly2357Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222G>A
  hgvsp: ENSP00000358366.4:p.Gly2408Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496G>A
  hgvsp: ENSP00000327209.9:p.Gly2166Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814G>A
  hgvsp: ENSP00000358360.3:p.Gly2272Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44972
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly2272Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQ

1-144854660-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854660
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854660
    reference: chr 1
allele count: 3
allele frequency: 2.470966147763776e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-4C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-4C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-4C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-4C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-4C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-4C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-4C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-4C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-4C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44972
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
hgvs: c.6814-4C>T
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-144854661-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854661
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854661
    reference: chr 1
allele count: 5
allele frequency: 4.118548294097296e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-5T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-5T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-5T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-5T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-5T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-5T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-5T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-5T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-5T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44972
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59388
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: c.6814-5T>C
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

1-144854664-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854664
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854664
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-8T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-8T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-8T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-8T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-8T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-8T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-8T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-8T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-8T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44971
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: c.6814-8T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

1-144854671-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854671
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854671
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-15G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-15G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-15G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-15G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-15G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-15G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-15G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-15G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-15G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44971
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

1-144854675-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854675
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854675
    reference: chr 1
allele count: 7732
allele frequency: 7.233875343824261e-2
allele num: 106886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-19G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-19G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-19G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-19G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-19G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-19G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-19G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-19G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-19G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 7.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 5.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 8.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 7.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 6.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 44944
  bin: 9.75e1
  variant carriers: 7305
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 8.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 9.25e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 6.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.75e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.5e0
  variant carriers: 64
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ

1-144854676-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854676
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854676
    reference: chr 1
allele count: 6
allele frequency: 4.941932295527551e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-20A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-20A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-20A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-20A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-20A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-20A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-20A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-20A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-20A>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40112
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

1-144854678-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854678
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854678
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-22A>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40109
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

1-144854679-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854679
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854679
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-23A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-23A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-23A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-23A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-23A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-23A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-23A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-23A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-23A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40109
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58976
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

1-144854683-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854683
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854683
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-27C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-27C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-27C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-27C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-27C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-27C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-27C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-27C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-27C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40109
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/1-144854685-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854685
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854685
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-29G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-29G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-29G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-29G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-29G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-29G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-29G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-29G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-29G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40108
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

1-144854689-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854689
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854689
    reference: chr 1
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-33C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-33C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-33C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-33C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-33C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-33C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-33C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-33C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-33C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40108
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58975
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-144854690-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854690
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854690
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-34G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-34G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-34G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-34G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-34G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-34G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-34G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-34G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-34G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/1-144854693-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854693
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854693
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-37T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-37T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-37T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-37T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-37T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-37T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-37T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-37T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-37T>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58974
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

1-144854696-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854696
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854696
    reference: chr 1
allele count: 4
allele frequency: 3.294675803900896e-5
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-40C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-40C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-40C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-40C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-40C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-40C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-40C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-40C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-40C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40108
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

1-144854696-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854696
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854696
    reference: chr 1
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-40C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-40C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-40C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-40C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-40C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-40C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-40C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-40C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-40C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40108
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ

1-144854697-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854697
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854697
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-41G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-41G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-41G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-41G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-41G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-41G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-41G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-41G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-41G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40107
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/1-144854698-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854698
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854698
    reference: chr 1
allele count: 5
allele frequency: 4.118480445454845e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-42G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-42G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-42G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-42G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-42G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-42G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-42G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-42G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-42G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40106
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58967
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

1-144854698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854698
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854698
    reference: chr 1
allele count: 7
allele frequency: 5.765872623636783e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-42G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-42G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-42G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-42G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-42G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-42G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-42G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-42G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-42G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40106
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-144854703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854703
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854703
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-47C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-47C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-47C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-47C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-47C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-47C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-47C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-47C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-47C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

1-144854704-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854704
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854704
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-48G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-48G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-48G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-48G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-48G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-48G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-48G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-48G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-48G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-144854706-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854706
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854706
    reference: chr 1
allele count: 36
allele frequency: 2.965354771750054e-4
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-50G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-50G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-50G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-50G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-50G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-50G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-50G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-50G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-50G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40104
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-144854707-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854707
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854707
    reference: chr 1
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-51G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-51G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-51G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-51G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-51G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-51G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-51G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-51G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-51G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

1-144854708-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144854708
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144854708
    reference: chr 1
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.214-52G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6496-52G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6814-52G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*317-52G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.346-52G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7222-52G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6814-52G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4248-52G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7069-52G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40104
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

1-144855690-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855690
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855690
    reference: chr 1
allele count: 2
allele frequency: 1.662980393461161e-5
allele num: 120266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+50C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+50C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+50C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+50C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+50C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+50C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+50C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+50C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+50C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5881
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4231
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2277
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

1-144855692-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855692
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855692
    reference: chr 1
allele count: 1
allele frequency: 8.313934153641504e-6
allele num: 120280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+48T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+48T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+48T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+48T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+48T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+48T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+48T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+48T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+48T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5062
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29409
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

1-144855695-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855695
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855694
    reference: chr 1
allele count: 1
allele frequency: 8.30923654734603e-6
allele num: 120348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+44delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+44delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+44delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+44delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+44delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+44delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+44delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+44delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+44delG
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 6766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8564
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2302
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3591
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: GC
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

1-144855696-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855696
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855696
    reference: chr 1
allele count: 680
allele frequency: 5.660628662759723e-3
allele num: 120128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+44G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+44G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+44G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+44G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+44G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+44G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+44G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+44G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+44G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8575
  bin: 3.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 6897
  bin: 2.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 6.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7184
  bin: 4.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 8250
  bin: 2.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 4.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 9.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9362
  bin: 3.25e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 5.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 6.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 5.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2479
  bin: 7.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 6.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 3.75e1
  variant carriers: 9
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

1-144855696-CAGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855696
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855693
    reference: chr 1
allele count: 4
allele frequency: 3.329781566329249e-5
allele num: 120128
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+41_6813+43delCCT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+41_*316+43delCCT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+41_6495+43delCCT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+41_7221+43delCCT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+41_4247+43delCCT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+41_345+43delCCT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+41_7068+43delCCT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+41_213+43delCCT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+41_6813+43delCCT
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8250
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9362
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6897
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: CAGG
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-144855699-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855699
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855699
    reference: chr 1
allele count: 2
allele frequency: 1.660026560424967e-5
allele num: 120480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+41C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+41C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+41C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+41C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+41C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+41C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+41C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+41C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+41C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4133
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-144855701-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855701
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855701
    reference: chr 1
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+39C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+39C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+39C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+39C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+39C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+39C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+39C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+39C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+39C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8595
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

1-144855704-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855704
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855704
    reference: chr 1
allele count: 7
allele frequency: 5.804311774461028e-5
allele num: 120600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+36G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+36G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+36G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+36G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+36G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+36G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+36G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+36G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+36G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8390
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3838
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4114
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

1-144855708-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855708
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855708
    reference: chr 1
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+32C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+32C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+32C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+32C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+32C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+32C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+32C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+32C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+32C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5079
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8623
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3701
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

1-144855710-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855710
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855710
    reference: chr 1
allele count: 2
allele frequency: 1.655903295247558e-5
allele num: 120780
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+30A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+30A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+30A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+30A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+30A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+30A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+30A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+30A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+30A>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8726
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

1-144855714-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855714
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855714
    reference: chr 1
allele count: 9
allele frequency: 7.443183697773661e-5
allele num: 120916
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+26T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+26T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+26T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+26T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+26T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+26T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+26T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+26T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+26T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8642
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8951
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4325
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2687
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS

http://identifiers.org/exac.variant/1-144855716-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855716
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855716
    reference: chr 1
allele count: 1
allele frequency: 8.267195767195768e-6
allele num: 120960
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+24G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+24G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+24G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+24G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+24G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+24G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+24G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+24G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+24G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8854
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/1-144855718-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855718
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855718
    reference: chr 1
allele count: 1
allele frequency: 8.263916435277007e-6
allele num: 121008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+22T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+22T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+22T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+22T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+22T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+22T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+22T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+22T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+22T>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-144855719-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855719
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855720
    reference: chr 1
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+20dupT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+20dupT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+20dupT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+20dupT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+20dupT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+20dupT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+20dupT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+20dupT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+20dupT
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 9917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3983
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4379
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4243
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD

1-144855724-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855724
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855724
    reference: chr 1
allele count: 2
allele frequency: 1.651091371396493e-5
allele num: 121132
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+16C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+16C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+16C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+16C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+16C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+16C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+16C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+16C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+16C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9018
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

1-144855725-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855725
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855725
    reference: chr 1
allele count: 13
allele frequency: 1.073351167475808e-4
allele num: 121116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+15C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+15C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+15C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+15C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+15C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+15C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+15C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+15C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+15C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9971
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2728
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 2
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-144855726-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855726
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855726
    reference: chr 1
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+14G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+14G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+14G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+14G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+14G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+14G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+14G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+14G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+14G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8941
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

1-144855732-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855732
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855732
    reference: chr 1
allele count: 8
allele frequency: 6.610914620037682e-5
allele num: 121012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+8G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+8G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+8G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+8G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+8G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+8G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+8G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+8G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+8G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8702
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 7.25e1
  variant carriers: 0
hgvs: c.6813+8G>A
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

1-144855733-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855733
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855733
    reference: chr 1
allele count: 5
allele frequency: 4.124187535055594e-5
allele num: 121236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+7T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+7T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+7T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+7T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+7T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+7T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+7T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+7T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+7T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 8701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29953
  bin: 9.75e1
  variant carriers: 4
hgvs: c.6813+7T>C
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

1-144855738-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855738
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855738
    reference: chr 1
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6813+2T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7068+2T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*316+2T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7221+2T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.213+2T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.345+2T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6495+2T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4247+2T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6813+2T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8822
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4285
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2472
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
hgvs: c.6813+2T>C
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-144855745-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855745
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855745
    reference: chr 1
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6490A>G
  hgvsp: ENSP00000327209.9:p.Lys2164Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6808A>G
  hgvsp: ENSP00000358360.3:p.Lys2270Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.208A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7216A>G
  hgvsp: ENSP00000358366.4:p.Lys2406Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.340A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7063A>G
  hgvsp: ENSP00000435654.1:p.Lys2355Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6808A>G
  hgvsp: ENSP00000358363.4:p.Lys2270Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*311A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4242A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29970
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys2270Glu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS

1-144855746-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855746
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855746
    reference: chr 1
allele count: 2
allele frequency: 1.649130908011478e-5
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6807C>T
  hgvsp: ENST00000369354.3:c.6807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.207C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*310C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6807C>T
  hgvsp: ENST00000369356.4:c.6807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7215C>T
  hgvsp: ENST00000369359.4:c.7215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6489C>T
  hgvsp: ENST00000313382.9:c.6489C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.339C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7062C>T
  hgvsp: ENST00000530740.1:c.7062C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4241C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4006
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly2269Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/1-144855747-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855747
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855747
    reference: chr 1
allele count: 5
allele frequency: 4.122895261968765e-5
allele num: 121274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6806G>T
  hgvsp: ENSP00000358360.3:p.Gly2269Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*309G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6806G>T
  hgvsp: ENSP00000358363.4:p.Gly2269Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.206G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7214G>T
  hgvsp: ENSP00000358366.4:p.Gly2405Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4240G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6488G>T
  hgvsp: ENSP00000327209.9:p.Gly2163Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7061G>T
  hgvsp: ENSP00000435654.1:p.Gly2354Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.338G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29975
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2474
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly2269Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-144855747-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855747
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855747
    reference: chr 1
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6806G>C
  hgvsp: ENSP00000358360.3:p.Gly2269Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6488G>C
  hgvsp: ENSP00000327209.9:p.Gly2163Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.338G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7214G>C
  hgvsp: ENSP00000358366.4:p.Gly2405Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7061G>C
  hgvsp: ENSP00000435654.1:p.Gly2354Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*309G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6806G>C
  hgvsp: ENSP00000358363.4:p.Gly2269Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.206G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4240G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4379
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4006
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly2269Ala
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

1-144855747-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855747
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855747
    reference: chr 1
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.206G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*309G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7061G>A
  hgvsp: ENSP00000435654.1:p.Gly2354Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6488G>A
  hgvsp: ENSP00000327209.9:p.Gly2163Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6806G>A
  hgvsp: ENSP00000358360.3:p.Gly2269Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.338G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7214G>A
  hgvsp: ENSP00000358366.4:p.Gly2405Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6806G>A
  hgvsp: ENSP00000358363.4:p.Gly2269Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4240G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly2269Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-144855748-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855748
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855748
    reference: chr 1
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6805G>A
  hgvsp: ENSP00000358363.4:p.Gly2269Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4239G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7213G>A
  hgvsp: ENSP00000358366.4:p.Gly2405Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.337G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.205G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6805G>A
  hgvsp: ENSP00000358360.3:p.Gly2269Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*308G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7060G>A
  hgvsp: ENSP00000435654.1:p.Gly2354Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6487G>A
  hgvsp: ENSP00000327209.9:p.Gly2163Ser
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8643
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly2269Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

1-144855750-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855750
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855750
    reference: chr 1
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*306C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7058C>T
  hgvsp: ENSP00000435654.1:p.Pro2353Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7211C>T
  hgvsp: ENSP00000358366.4:p.Pro2404Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6803C>T
  hgvsp: ENSP00000358360.3:p.Pro2268Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6803C>T
  hgvsp: ENSP00000358363.4:p.Pro2268Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6485C>T
  hgvsp: ENSP00000327209.9:p.Pro2162Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.335C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.203C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4237C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro2268Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

1-144855751-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144855751
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144855751
    reference: chr 1
allele count: 3
allele frequency: 2.473533194815474e-5
allele num: 121284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000533768
  gene symbol: PDE4DIP
  hgvsc: ENST00000533768.1:n.334C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.6802C>T
  hgvsp: ENSP00000358360.3:p.Pro2268Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.6484C>T
  hgvsp: ENSP00000327209.9:p.Pro2162Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436694
  ensembl transcript: ENST00000530062
  gene symbol: PDE4DIP
  hgvsc: ENST00000530062.1:c.*305C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.7210C>T
  hgvsp: ENSP00000358366.4:p.Pro2404Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525630
  gene symbol: PDE4DIP
  hgvsc: ENST00000525630.1:n.202C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.6802C>T
  hgvsp: ENSP00000358363.4:p.Pro2268Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.7057C>T
  hgvsp: ENSP00000435654.1:p.Pro2353Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000524974
  gene symbol: PDE4DIP
  hgvsc: ENST00000524974.1:n.4236C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8717
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro2268Ser
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59401
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.299e0

QD
type: SiteQuality
SIO_000300: 2.58e0

MQRankSum
type: SiteQuality
SIO_000300: 8.38e-1

MQ
type: SiteQuality
SIO_000300: 5.524e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

FS
type: SiteQuality
SIO_000300: 2.606e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 8.337426e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59401
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.521e0

MQ
type: SiteQuality
SIO_000300: 5.556e1

QD
type: SiteQuality
SIO_000300: 2.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 4.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.17e-1

DP
type: SiteQuality
SIO_000300: 8.337322e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59401
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.4e-1

FS
type: SiteQuality
SIO_000300: 7.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.019e0

MQRankSum
type: SiteQuality
SIO_000300: -2.505e0

MQ
type: SiteQuality
SIO_000300: 5.596e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.18e0

DP
type: SiteQuality
SIO_000300: 8.337154e6

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59383
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.609e0

MQ
type: SiteQuality
SIO_000300: 5.581e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.158e0

QD
type: SiteQuality
SIO_000300: 3.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.774e0

DP
type: SiteQuality
SIO_000300: 8.337212e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59396
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

VQSLOD
type: SiteQuality
SIO_000300: -3.004e0

MQRankSum
type: SiteQuality
SIO_000300: -3.003e0

FS
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.84e-1

MQ
type: SiteQuality
SIO_000300: 5.514e1

QD
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 8.335568e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59400
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.506e1

DP
type: SiteQuality
SIO_000300: 8.33499e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.893e0

VQSLOD
type: SiteQuality
SIO_000300: -1.891e0

FS
type: SiteQuality
SIO_000300: 3.824e0

MQRankSum
type: SiteQuality
SIO_000300: 2.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.8e0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993946114424431e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.077155824508321e-4
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

VQSLOD
type: SiteQuality
SIO_000300: -1.678e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.024e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

DP
type: SiteQuality
SIO_000300: 8.334426e6

FS
type: SiteQuality
SIO_000300: 1.629e0

MQ
type: SiteQuality
SIO_000300: 5.54e1

QD
type: SiteQuality
SIO_000300: 1.86e0

GenotypeQuality
all individuals: 59392
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.678e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

QD
type: SiteQuality
SIO_000300: 1.86e0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

FS
type: SiteQuality
SIO_000300: 1.629e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.024e0

DP
type: SiteQuality
SIO_000300: 8.334426e6

MQ
type: SiteQuality
SIO_000300: 5.54e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59398
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.595e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.408e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 8.332468e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.545e0

FS
type: SiteQuality
SIO_000300: 5.732e0

QD
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.16e-1

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59400
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-2

DP
type: SiteQuality
SIO_000300: 8.331987e6

FS
type: SiteQuality
SIO_000300: 1.558e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.343e0

VQSLOD
type: SiteQuality
SIO_000300: -2.02e0

MQ
type: SiteQuality
SIO_000300: 5.591e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.85e-1

QD
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59400
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.041e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.331835e6

MQ
type: SiteQuality
SIO_000300: 5.75e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-2

QD
type: SiteQuality
SIO_000300: 4.42e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59398
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.03e0

DP
type: SiteQuality
SIO_000300: 8.331798e6

FS
type: SiteQuality
SIO_000300: 3.297e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.298e0

VQSLOD
type: SiteQuality
SIO_000300: -2.633e0

MQ
type: SiteQuality
SIO_000300: 5.501e1

QD
type: SiteQuality
SIO_000300: 9.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.44e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59398
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.44e-1

FS
type: SiteQuality
SIO_000300: 3.297e0

DP
type: SiteQuality
SIO_000300: 8.331798e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

MQRankSum
type: SiteQuality
SIO_000300: 3.03e0

QD
type: SiteQuality
SIO_000300: 9.1e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.633e0

MQ
type: SiteQuality
SIO_000300: 5.501e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.298e0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 265
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 59344
bin: 9.75e1
variant carriers: 334

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 4

Latino
type: Population
allele count: 26
allele frequency: 2.247191011235955e-3
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 11
allele frequency: 1.663641863278887e-3
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.609840476648087e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 280
allele frequency: 4.199412082308476e-3
allele num: 66676
num of homozygotes: 0

South Asian
type: Population
allele count: 16
allele frequency: 9.689922480620155e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.303964757709251e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.663e0

QD
type: SiteQuality
SIO_000300: 2.42e0

MQRankSum
type: SiteQuality
SIO_000300: 3.45e0

VQSLOD
type: SiteQuality
SIO_000300: -1.257e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

MQ
type: SiteQuality
SIO_000300: 5.61e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.334038e6

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59392
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.518e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.25e0

VQSLOD
type: SiteQuality
SIO_000300: -1.926e0

QD
type: SiteQuality
SIO_000300: 1.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.194e0

DP
type: SiteQuality
SIO_000300: 8.300876e6

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59392
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.194e0

VQSLOD
type: SiteQuality
SIO_000300: -1.926e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

MQ
type: SiteQuality
SIO_000300: 5.518e1

DP
type: SiteQuality
SIO_000300: 8.300876e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.94e0

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59365
bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 205
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 31
allele frequency: 1.881981544439048e-3
allele num: 16472
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.301609e6

MQ
type: SiteQuality
SIO_000300: 5.526e1

MQRankSum
type: SiteQuality
SIO_000300: -3.968e0

FS
type: SiteQuality
SIO_000300: 1.798e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.346e0

VQSLOD
type: SiteQuality
SIO_000300: -3.646e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

GenotypeQuality
all individuals: 204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59389
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-2

QD
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: -1.516e0

DP
type: SiteQuality
SIO_000300: 8.297064e6

FS
type: SiteQuality
SIO_000300: 8.179999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.636e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

MQ
type: SiteQuality
SIO_000300: 5.586e1

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59391
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.693e0

MQRankSum
type: SiteQuality
SIO_000300: -9.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.57e0

DP
type: SiteQuality
SIO_000300: 8.295519e6

FS
type: SiteQuality
SIO_000300: 8.64e-1

QD
type: SiteQuality
SIO_000300: 8.4e-1

MQ
type: SiteQuality
SIO_000300: 5.371e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59391
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495190146543199e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.45e0

FS
type: SiteQuality
SIO_000300: 2.578e0

VQSLOD
type: SiteQuality
SIO_000300: -1.652e0

MQ
type: SiteQuality
SIO_000300: 5.603e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.571e0

DP
type: SiteQuality
SIO_000300: 8.295048e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

QD
type: SiteQuality
SIO_000300: 2.18e0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.49265719594797e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.528e1

MQRankSum
type: SiteQuality
SIO_000300: -2.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

QD
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

DP
type: SiteQuality
SIO_000300: 8.294821e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.403e0

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59392
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

DP
type: SiteQuality
SIO_000300: 8.294151e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: -1.963e0

MQ
type: SiteQuality
SIO_000300: 5.71e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

QD
type: SiteQuality
SIO_000300: 4.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e0

GenotypeQuality
all individuals: 169
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59392
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.86e-1

QD
type: SiteQuality
SIO_000300: 6.95e0

FS
type: SiteQuality
SIO_000300: 2.25e0

DP
type: SiteQuality
SIO_000300: 8.29392e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

VQSLOD
type: SiteQuality
SIO_000300: -1.402e0

MQ
type: SiteQuality
SIO_000300: 5.474e1

MQRankSum
type: SiteQuality
SIO_000300: 3.6e0

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 67

GenotypeQuality
all individuals: 317
bin: 7.75e1
variant carriers: 84

GenotypeQuality
all individuals: 6840
bin: 2.5e0
variant carriers: 56

GenotypeQuality
all individuals: 146
bin: 2.25e1
variant carriers: 74

GenotypeQuality
all individuals: 161
bin: 5.25e1
variant carriers: 91

GenotypeQuality
all individuals: 141
bin: 1.75e1
variant carriers: 57

GenotypeQuality
all individuals: 50052
bin: 9.75e1
variant carriers: 6570

GenotypeQuality
all individuals: 219
bin: 7.25e1
variant carriers: 68

GenotypeQuality
all individuals: 163
bin: 3.75e1
variant carriers: 78

GenotypeQuality
all individuals: 290
bin: 6.75e1
variant carriers: 75

GenotypeQuality
all individuals: 384
bin: 6.25e1
variant carriers: 68

GenotypeQuality
all individuals: 164
bin: 2.75e1
variant carriers: 86

GenotypeQuality
all individuals: 244
bin: 8.75e1
variant carriers: 79

GenotypeQuality
all individuals: 318
bin: 8.25e1
variant carriers: 74

Latino
type: Population
allele count: 855
allele frequency: 8.719151539873547e-2
allele num: 9806
num of homozygotes: 0

Other
type: Population
allele count: 72
allele frequency: 8.780487804878048e-2
allele num: 820
num of homozygotes: 0

South Asian
type: Population
allele count: 981
allele frequency: 6.363518422418267e-2
allele num: 15416
num of homozygotes: 0

African
type: Population
allele count: 156
allele frequency: 1.534526854219949e-2
allele num: 10166
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 1.858304297328688e-3
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 490
allele frequency: 8.822470291681671e-2
allele num: 5554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5162
allele frequency: 9.134019888877093e-2
allele num: 56514
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.54e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e0

DP
type: SiteQuality
SIO_000300: 8.272292e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.003e0

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.99e-1

FS
type: SiteQuality
SIO_000300: 8.33e-1

MQ
type: SiteQuality
SIO_000300: 5.54e1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58976
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.990110878034162e-5
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.14217e6

QD
type: SiteQuality
SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.083e0

VQSLOD
type: SiteQuality
SIO_000300: -1.561e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.585e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58976
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.34e1

MQRankSum
type: SiteQuality
SIO_000300: 4.02e0

VQSLOD
type: SiteQuality
SIO_000300: -2.571e0

DP
type: SiteQuality
SIO_000300: 7.14163e6

FS
type: SiteQuality
SIO_000300: 3.001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.44e-1

QD
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.222e0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.48e0

FS
type: SiteQuality
SIO_000300: 2.505e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.63e0

DP
type: SiteQuality
SIO_000300: 7.141553e6

VQSLOD
type: SiteQuality
SIO_000300: -2.107e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQ
type: SiteQuality
SIO_000300: 5.578e1

QD
type: SiteQuality
SIO_000300: 4.87e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58975
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-1

DP
type: SiteQuality
SIO_000300: 7.141252e6

QD
type: SiteQuality
SIO_000300: 1.43e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 5.632e1

MQRankSum
type: SiteQuality
SIO_000300: -2.321e0

VQSLOD
type: SiteQuality
SIO_000300: -2.257e0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58975
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.518e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.116e0

QD
type: SiteQuality
SIO_000300: 2.08e0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.041e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.956e0

FS
type: SiteQuality
SIO_000300: 2.422e0

DP
type: SiteQuality
SIO_000300: 7.141174e6

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.140955e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.513e0

MQ
type: SiteQuality
SIO_000300: 5.591e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.523e0

FS
type: SiteQuality
SIO_000300: 3.687e0

MQRankSum
type: SiteQuality
SIO_000300: 2.1e0

QD
type: SiteQuality
SIO_000300: 4.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.399999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58974
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.4e-2

MQ
type: SiteQuality
SIO_000300: 5.558e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.993e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.12e0

FS
type: SiteQuality
SIO_000300: 8.5e-1

QD
type: SiteQuality
SIO_000300: 2.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.93e-1

DP
type: SiteQuality
SIO_000300: 7.140749e6

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.321e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.609999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 3.432e0

QD
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.378e1

DP
type: SiteQuality
SIO_000300: 7.140466e6

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58971
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.397e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.812e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.82e-1

FS
type: SiteQuality
SIO_000300: 2.683e0

DP
type: SiteQuality
SIO_000300: 7.140288e6

MQ
type: SiteQuality
SIO_000300: 5.547e1

QD
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 226
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58971
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 247
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.46e-1

FS
type: SiteQuality
SIO_000300: 2.683e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.812e0

DP
type: SiteQuality
SIO_000300: 7.140288e6

VQSLOD
type: SiteQuality
SIO_000300: -1.397e0

QD
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 5.547e1

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58972
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

MQ
type: SiteQuality
SIO_000300: 5.42e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 1.745e0

VQSLOD
type: SiteQuality
SIO_000300: -1.668e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.32e0

QD
type: SiteQuality
SIO_000300: 3.28e0

DP
type: SiteQuality
SIO_000300: 7.139382e6

GenotypeQuality
all individuals: 191
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 259
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.492208103572285e-5
allele num: 66736
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 7.13925e6

MQ
type: SiteQuality
SIO_000300: 5.52e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.531e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.528e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.1e-2

QD
type: SiteQuality
SIO_000300: 3.13e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58967
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 237
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.990649724286742e-5
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.531e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

QD
type: SiteQuality
SIO_000300: 3.13e0

MQ
type: SiteQuality
SIO_000300: 5.52e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.528e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.13925e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58971
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.319e1

FS
type: SiteQuality
SIO_000300: 4.91e0

VQSLOD
type: SiteQuality
SIO_000300: -2.337e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

DP
type: SiteQuality
SIO_000300: 7.138518e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.697e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

QD
type: SiteQuality
SIO_000300: 2.54e0

MQRankSum
type: SiteQuality
SIO_000300: -2.228e0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58970
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.446e0

QD
type: SiteQuality
SIO_000300: 9.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.49e-1

MQ
type: SiteQuality
SIO_000300: 5.508e1

VQSLOD
type: SiteQuality
SIO_000300: -4.614e0

MQRankSum
type: SiteQuality
SIO_000300: -4.72e0

DP
type: SiteQuality
SIO_000300: 7.138484e6

FS
type: SiteQuality
SIO_000300: 3.199e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.787e0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58964
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 261
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.845548152634767e-4
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.596259889714697e-4
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.931e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.576e1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

VQSLOD
type: SiteQuality
SIO_000300: -1.414e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e-1

DP
type: SiteQuality
SIO_000300: 7.138219e6

QD
type: SiteQuality
SIO_000300: 2.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58969
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 351
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.441e0

MQRankSum
type: SiteQuality
SIO_000300: 3.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.265e1

QD
type: SiteQuality
SIO_000300: 7.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.969e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.98e-1

DP
type: SiteQuality
SIO_000300: 7.138112e6

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58970
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

MQ
type: SiteQuality
SIO_000300: 5.586e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.599e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.66e-1

DP
type: SiteQuality
SIO_000300: 7.138081e6

QD
type: SiteQuality
SIO_000300: 8.300000000000001e0

FS
type: SiteQuality
SIO_000300: 1.6951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.601e0

GenotypeQuality
all individuals: 1431
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 669
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3808
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3663
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29399
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1676
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2470
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514233797698365e-4
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.17e1

QD
type: SiteQuality
SIO_000300: 2.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.285e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

FS
type: SiteQuality
SIO_000300: 3.351e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.51e-1

DP
type: SiteQuality
SIO_000300: 2.415655e6

VQSLOD
type: SiteQuality
SIO_000300: -1.605e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.46e-1

GenotypeQuality
all individuals: 945
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5137
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3667
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3875
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511578692786746e-5
allele num: 66156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQ
type: SiteQuality
SIO_000300: 5.607e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

QD
type: SiteQuality
SIO_000300: 7.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.64e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.108e0

MQRankSum
type: SiteQuality
SIO_000300: 7.92e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.419011e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.55e-1

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3942
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6130
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2517
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29431
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3976
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.135722174499939e-5
allele num: 16298
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-1

DP
type: SiteQuality
SIO_000300: 2.425178e6

FS
type: SiteQuality
SIO_000300: 2.325e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.87e-1

QD
type: SiteQuality
SIO_000300: 4.9e0

MQ
type: SiteQuality
SIO_000300: 5.34e1

GenotypeQuality
all individuals: 29507
bin: 9.75e1
variant carriers: 478

GenotypeQuality
all individuals: 3648
bin: 7.75e1
variant carriers: 20

GenotypeQuality
all individuals: 952
bin: 4.75e1
variant carriers: 18

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 3576
bin: 9.25e1
variant carriers: 15

GenotypeQuality
all individuals: 555
bin: 5.25e1
variant carriers: 17

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2301
bin: 8.75e1
variant carriers: 16

GenotypeQuality
all individuals: 548
bin: 4.25e1
variant carriers: 12

GenotypeQuality
all individuals: 210
bin: 5.75e1
variant carriers: 13

GenotypeQuality
all individuals: 6289
bin: 6.25e1
variant carriers: 12

GenotypeQuality
all individuals: 689
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 3925
bin: 8.25e1
variant carriers: 14

European (Non-Finnish)
type: Population
allele count: 68
allele frequency: 1.027904586268404e-3
allele num: 66154
num of homozygotes: 0

Latino
type: Population
allele count: 25
allele frequency: 2.167880679847381e-3
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 584
allele frequency: 5.802861685214626e-2
allele num: 10064
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.229256299938537e-4
allele num: 16270
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.716e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

DP
type: SiteQuality
SIO_000300: 2.430474e6

MQRankSum
type: SiteQuality
SIO_000300: -4.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

QD
type: SiteQuality
SIO_000300: 3.03e0

MQ
type: SiteQuality
SIO_000300: 5.134e1

GenotypeQuality
all individuals: 3576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29507
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3648
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2301
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.534873174713547e-5
allele num: 66154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.134e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

DP
type: SiteQuality
SIO_000300: 2.430474e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.716e0

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.03e0

GenotypeQuality
all individuals: 2358
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29544
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3779
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7254
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3645
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01987074953192e-5
allele num: 66228
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.632e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.61e-1

QD
type: SiteQuality
SIO_000300: 3.91e0

FS
type: SiteQuality
SIO_000300: 1.735e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.062e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.099e1

DP
type: SiteQuality
SIO_000300: 2.437571e6

GenotypeQuality
all individuals: 535
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4069
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7631
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3802
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29552
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3657
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 380
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4165
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509251713000694e-5
allele num: 66258
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.75e0

QD
type: SiteQuality
SIO_000300: 3.94e0

FS
type: SiteQuality
SIO_000300: 9.518000000000001e0

DP
type: SiteQuality
SIO_000300: 2.441671e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.125e0

VQSLOD
type: SiteQuality
SIO_000300: -3.296e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.611e0

MQ
type: SiteQuality
SIO_000300: 5.438e1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3672
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8123
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29567
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 404
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2611
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4222
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66308
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.131970260223048e-4
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 5.01e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.01e-1

DP
type: SiteQuality
SIO_000300: 2.44781e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.519e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 4.01e0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8629
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4174
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29610
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3886
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.255e0

MQ
type: SiteQuality
SIO_000300: 5.399e1

VQSLOD
type: SiteQuality
SIO_000300: -1.495e0

QD
type: SiteQuality
SIO_000300: 2.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 2.455034e6

GenotypeQuality
all individuals: 370
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2668
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29617
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2426
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4183
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4297
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012320390396723e-5
allele num: 66394
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

VQSLOD
type: SiteQuality
SIO_000300: -1.277e0

MQ
type: SiteQuality
SIO_000300: 5.205e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 8.401999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

QD
type: SiteQuality
SIO_000300: 7.71e0

DP
type: SiteQuality
SIO_000300: 2.456893e6

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3717
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29627
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 114
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4205
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.704061895551257e-4
allele num: 10340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

QD
type: SiteQuality
SIO_000300: 5.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.02e0

MQ
type: SiteQuality
SIO_000300: 5.226e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.43e-1

DP
type: SiteQuality
SIO_000300: 2.461263e6

VQSLOD
type: SiteQuality
SIO_000300: -7.465000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 2693
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2450
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4223
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29631
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4340
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3732
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3959
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.182e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.654e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 2.464022e6

VQSLOD
type: SiteQuality
SIO_000300: -1.949e0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2460
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3981
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4234
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29639
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2707
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8936
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503759398496241e-5
allele num: 66500
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.9239e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 6.75e0

VQSLOD
type: SiteQuality
SIO_000300: -4.228e0

MQRankSum
type: SiteQuality
SIO_000300: 3.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.96e0

MQ
type: SiteQuality
SIO_000300: 5.303e1

DP
type: SiteQuality
SIO_000300: 2.465244e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e-1

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8964
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29640
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2712
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.656237929702588e-5
allele num: 10356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66520
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-2

DP
type: SiteQuality
SIO_000300: 2.465936e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

FS
type: SiteQuality
SIO_000300: 1.406e0

VQSLOD
type: SiteQuality
SIO_000300: -3.704e-1

MQ
type: SiteQuality
SIO_000300: 5.148e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

QD
type: SiteQuality
SIO_000300: 2.87e0

GenotypeQuality
all individuals: 2469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4396
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2730
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29643
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3745
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4001
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.468561e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

FS
type: SiteQuality
SIO_000300: 8.573e0

VQSLOD
type: SiteQuality
SIO_000300: -1.916e0

MQRankSum
type: SiteQuality
SIO_000300: -5.74e-1

QD
type: SiteQuality
SIO_000300: 2.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

MQ
type: SiteQuality
SIO_000300: 4.971e1

GenotypeQuality
all individuals: 144
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3741
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8946
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4383
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2468
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29637
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4001
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4270
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.320185614849188e-4
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.892960462873674e-4
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.201959193485381e-4
allele num: 66558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 2.470422e6

FS
type: SiteQuality
SIO_000300: 7.862e0

MQRankSum
type: SiteQuality
SIO_000300: -2.407e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.233e1

QD
type: SiteQuality
SIO_000300: 8.100000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.506e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-1

GenotypeQuality
all individuals: 2473
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4278
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4396
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29676
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3743
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4011
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.026e1

QD
type: SiteQuality
SIO_000300: 4.87e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.175e0

FS
type: SiteQuality
SIO_000300: 1.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.471048e6

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 138
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 4329
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3730
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29595
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2457
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8715
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3978
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.024184815305017e-5
allele num: 66488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.929384526336099e-4
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.439e0

DP
type: SiteQuality
SIO_000300: 2.484191e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.427e0

VQSLOD
type: SiteQuality
SIO_000300: -4.705e0

MQ
type: SiteQuality
SIO_000300: 5.158e1

MQRankSum
type: SiteQuality
SIO_000300: -3.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.449e0

FS
type: SiteQuality
SIO_000300: 6.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.7e-1

GenotypeQuality
all individuals: 102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3765
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4373
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8819
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4006
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4285
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.924187030979411e-4
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502476361999099e-5
allele num: 66630
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.071e1

QD
type: SiteQuality
SIO_000300: 2.64e0

VQSLOD
type: SiteQuality
SIO_000300: -5.221e0

FS
type: SiteQuality
SIO_000300: 1.6151e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.167e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.437e0

DP
type: SiteQuality
SIO_000300: 2.482726e6

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2752
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3767
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29957
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4378
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4009
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 1.412e0

VQSLOD
type: SiteQuality
SIO_000300: -1.812e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 5.638e1

DP
type: SiteQuality
SIO_000300: 2.483444e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.475e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.63e-1

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4387
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4292
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8772
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2477
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4008
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3770
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.083e0

VQSLOD
type: SiteQuality
SIO_000300: -3.372e0

DP
type: SiteQuality
SIO_000300: 2.484078e6

MQ
type: SiteQuality
SIO_000300: 5.33e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 2.31e0

MQRankSum
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.713e0

FS
type: SiteQuality
SIO_000300: 4.818e0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4386
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8752
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29970
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4292
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2477
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3770
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.344e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 4.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e0

FS
type: SiteQuality
SIO_000300: 8.470000000000001e0

DP
type: SiteQuality
SIO_000300: 2.484291e6

VQSLOD
type: SiteQuality
SIO_000300: -2.469e0

MQ
type: SiteQuality
SIO_000300: 5.411e1

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8681
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4379
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4006
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4292
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000660145231951e-5
allele num: 66652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592464569650881e-4
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

FS
type: SiteQuality
SIO_000300: 1.355e0

MQ
type: SiteQuality
SIO_000300: 5.253e1

QD
type: SiteQuality
SIO_000300: 3.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.918e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

DP
type: SiteQuality
SIO_000300: 2.484866e6

VQSLOD
type: SiteQuality
SIO_000300: -1.516e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.93e-1

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4292
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8681
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29975
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.516e0

FS
type: SiteQuality
SIO_000300: 1.355e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.93e-1

MQ
type: SiteQuality
SIO_000300: 5.253e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.918e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

QD
type: SiteQuality
SIO_000300: 3.74e0

DP
type: SiteQuality
SIO_000300: 2.484866e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4379
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29975
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4006
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4292
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8681
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 2.484866e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

FS
type: SiteQuality
SIO_000300: 1.355e0

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

QD
type: SiteQuality
SIO_000300: 3.74e0

MQ
type: SiteQuality
SIO_000300: 5.253e1

VQSLOD
type: SiteQuality
SIO_000300: -1.516e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.918e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.93e-1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3773
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4380
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4005
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2476
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29979
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.484896e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

MQ
type: SiteQuality
SIO_000300: 5.332e1

VQSLOD
type: SiteQuality
SIO_000300: -2.873e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

QD
type: SiteQuality
SIO_000300: 6.03e0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4390
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3774
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8687
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29983
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4301
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.306e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.74e-1

QD
type: SiteQuality
SIO_000300: 6.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.301e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.63e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.928e0

MQRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.484912e6