1-71331417-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331417
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331417
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12875T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12875T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1204T>A
  hgvsp: ENSP00000423561.1:p.Ser402Thr
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3337T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12875T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3337T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12875T>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44882
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2011
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser402Thr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-71331425-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331425
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331425
    reference: chr 1
allele count: 3
allele frequency: 2.47137325974133e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12883T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1196T>C
  hgvsp: ENSP00000423561.1:p.Met399Thr
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3345T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12883T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12883T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12883T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3345T>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4320
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4652
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6680
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2252
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met399Thr
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-71331429-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331429
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331429
    reference: chr 1
allele count: 9
allele frequency: 7.450701193767902e-5
allele num: 120794
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1192G>A
  hgvsp: ENSP00000423561.1:p.Ala398Thr
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12887G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12887G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12887G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12887G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3349G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3349G>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4057
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala398Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

1-71331430-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331430
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331430
    reference: chr 1
allele count: 30310
allele frequency: 2.510020206035311e-1
allele num: 120756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3350C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1191C>T
  hgvsp: ENST00000497146.1:c.1191C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12888C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3350C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12888C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12888C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12888C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17276
  bin: 9.75e1
  variant carriers: 14419
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 6.75e1
  variant carriers: 1054
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 4.75e1
  variant carriers: 482
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 5.25e1
  variant carriers: 611
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 5.75e1
  variant carriers: 826
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 4.25e1
  variant carriers: 334
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 7.75e1
  variant carriers: 1227
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 2.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 3.25e1
  variant carriers: 144
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 6.25e1
  variant carriers: 911
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 8.25e1
  variant carriers: 1325
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 7.25e1
  variant carriers: 1211
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 3.75e1
  variant carriers: 243
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 8.75e1
  variant carriers: 1498
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 2.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 9.25e1
  variant carriers: 1591
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1589
  bin: 8.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro397Pro
num of homozygotes: 4277
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP

1-71331431-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331431
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331431
    reference: chr 1
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3351C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12889C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1190C>G
  hgvsp: ENSP00000423561.1:p.Pro397Arg
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12889C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12889C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3351C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12889C>G
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2753
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4892
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1658
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2932
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro397Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/1-71331433-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331433
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331433
    reference: chr 1
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1188T>G
  hgvsp: ENSP00000423561.1:p.Phe396Leu
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3353T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12891T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12891T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12891T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3353T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12891T>G
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5984
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2706
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4864
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2928
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1654
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe396Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-71331434-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331434
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331434
    reference: chr 1
allele count: 2
allele frequency: 1.648396933981703e-5
allele num: 121330
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1187T>C
  hgvsp: ENSP00000423561.1:p.Phe396Ser
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3354T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12892T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12892T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12892T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3354T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12892T>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6109
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40864
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4879
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe396Ser
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

1-71331455-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331455
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331455
    reference: chr 1
allele count: 1147
allele frequency: 9.45527088073334e-3
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3375G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12913G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12913G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1166G>A
  hgvsp: ENSP00000423561.1:p.Arg389His
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12913G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12913G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3375G>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 7.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 9.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6090
  bin: 4.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 5.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 6.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 4.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 8.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 9.75e1
  variant carriers: 257
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 6.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 8.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 5.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 7.25e1
  variant carriers: 111
genotype quality: GenotypeQuality
  all individuals: 4717
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2915
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41003
  bin: 9.75e1
  variant carriers: 1135
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg389His
num of homozygotes: 11
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

1-71331455-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331455
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331454
    reference: chr 1
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12914delC
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12914delC
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3376delC
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3376delC
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12914delC
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12914delC
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1165delC
  hgvsp: ENSP00000423561.1:p.Arg389ValfsTer20
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3080
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2703
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg389ValfsTer20
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: CG
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

1-71331456-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331456
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331456
    reference: chr 1
allele count: 11
allele frequency: 9.067976851928181e-5
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3376C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1165C>T
  hgvsp: ENSP00000423561.1:p.Arg389Cys
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12914C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12914C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12914C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12914C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3376C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6046
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2967
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg389Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

1-71331457-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331457
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331456
    reference: chr 1
allele count: 3
allele frequency: 2.472595400972554e-5
allele num: 121330
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12916delT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1163delT
  hgvsp: ENSP00000423561.1:p.Phe388SerfsTer21
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12916delT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12916delT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3378delT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12916delT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3378delT
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5464
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2967
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe388SerfsTer21
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: GA
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

1-71331462-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331462
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331462
    reference: chr 1
allele count: 2
allele frequency: 1.648587160803192e-5
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3382C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3382C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12920C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12920C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12920C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1159C>A
  hgvsp: ENSP00000423561.1:p.Pro387Thr
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12920C>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6045
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5461
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2751
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4746
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro387Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-71331477-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331477
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331477
    reference: chr 1
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1144A>T
  hgvsp: ENSP00000423561.1:p.Arg382Trp
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12935A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12935A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12935A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3397A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3397A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12935A>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6040
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5463
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4653
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2953
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2665
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2729
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg382Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

1-71331483-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331483
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331483
    reference: chr 1
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12941C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3403C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12941C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1138C>T
  hgvsp: ENSP00000423561.1:p.Pro380Ser
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3403C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12941C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12941C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6038
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2641
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2946
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro380Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

1-71331484-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331484
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331484
    reference: chr 1
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1137T>A
  hgvsp: ENSP00000423561.1:p.Asp379Glu
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3404T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12942T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12942T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12942T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12942T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3404T>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6038
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2952
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40606
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp379Glu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

1-71331498-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331498
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331498
    reference: chr 1
allele count: 114156
allele frequency: 9.412598944591029e-1
allele num: 121280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1154-3418T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12956T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1123T>C
  hgvsp: ENSP00000423561.1:p.Ser375Pro
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12956T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12956T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12956T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1181-3418T>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 6.25e1
  variant carriers: 4933
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 2.25e1
  variant carriers: 1055
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 500
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 7.25e1
  variant carriers: 2891
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 3.25e1
  variant carriers: 3533
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 8.75e1
  variant carriers: 1034
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 5.25e1
  variant carriers: 6493
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 2.75e1
  variant carriers: 2115
genotype depth: GenotypeDepth
  all individuals: 6288
  bin: 4.25e1
  variant carriers: 6281
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 6.75e1
  variant carriers: 3833
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 739
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 219
genotype depth: GenotypeDepth
  all individuals: 6754
  bin: 4.75e1
  variant carriers: 6750
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 7.75e1
  variant carriers: 2040
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 8.25e1
  variant carriers: 1362
genotype depth: GenotypeDepth
  all individuals: 5060
  bin: 3.75e1
  variant carriers: 5036
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 5.75e1
  variant carriers: 5736
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 9.75e1
  variant carriers: 5845
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 55514
  bin: 9.75e1
  variant carriers: 55486
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.75e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 9.25e1
  variant carriers: 1110
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.25e1
  variant carriers: 288
hgvs: p.Ser375Pro
num of homozygotes: 53781
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

1-71331504-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331504
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331504
    reference: chr 1
allele count: 2
allele frequency: 1.668474180362059e-5
allele num: 119870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12962C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12962C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+3423C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1117C>T
  hgvsp: ENSP00000423561.1:p.Pro373Ser
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12962C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+3423C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12962C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28020
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35166
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro373Ser
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD

1-71331536-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331536
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331536
    reference: chr 1
allele count: 4
allele frequency: 3.428826141370501e-5
allele num: 116658
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12994A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12994A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+3391A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12994A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+3391A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-20A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12994A>G
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9519
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6442
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5174
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP

1-71331539-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331539
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331539
    reference: chr 1
allele count: 1
allele frequency: 8.60037497634897e-6
allele num: 116274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-12997G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-12997G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-12997G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+3388G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-12997G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+3388G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-23G>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4538
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3460
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5167
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5817
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2594
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-71331552-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331552
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331552
    reference: chr 1
allele count: 2
allele frequency: 1.743800788197956e-5
allele num: 114692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+3375C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-36C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-13010C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-13010C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-13010C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+3375C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-13010C>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12584
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8070
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3838
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8090
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ

1-71331559-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331559
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331559
    reference: chr 1
allele count: 1
allele frequency: 8.809486054583575e-6
allele num: 113514
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-13017C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+3368C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-43C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-13017C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-13017C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-13017C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+3368C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11574
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
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genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6800
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2892
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5153
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3802
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

1-71331560-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331560
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331560
    reference: chr 1
allele count: 1
allele frequency: 8.855042946958292e-6
allele num: 112930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-44T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-13018T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+3367T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-13018T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+3367T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-13018T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-13018T>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10136
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3236
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

1-71331567-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71331567
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71331567
    reference: chr 1
allele count: 1
allele frequency: 8.99814638184534e-6
allele num: 111134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+3360A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-13025A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+3360A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-13025A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-51A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-13025A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-13025A>G
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

1-71334881-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334881
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334881
    reference: chr 1
allele count: 22
allele frequency: 1.618599175985874e-3
allele num: 13592
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16339A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+46A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16339A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16339A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+46A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3365A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16339A>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 239
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genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
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genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 101
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
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genotype depth: GenotypeDepth
  all individuals: 182
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genotype depth: GenotypeDepth
  all individuals: 1114
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genotype depth: GenotypeDepth
  all individuals: 168
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genotype depth: GenotypeDepth
  all individuals: 245
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 241
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
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genotype depth: GenotypeDepth
  all individuals: 76
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genotype depth: GenotypeDepth
  all individuals: 248
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genotype depth: GenotypeDepth
  all individuals: 188
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genotype depth: GenotypeDepth
  all individuals: 442
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 84
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genotype quality: GenotypeQuality
  all individuals: 397
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genotype quality: GenotypeQuality
  all individuals: 2234
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genotype quality: GenotypeQuality
  all individuals: 768
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genotype quality: GenotypeQuality
  all individuals: 1000
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genotype quality: GenotypeQuality
  all individuals: 1961
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genotype quality: GenotypeQuality
  all individuals: 281
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genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 376
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-71334884-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334884
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334884
    reference: chr 1
allele count: 3
allele frequency: 2.074975791949094e-4
allele num: 14458
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16342A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+43A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16342A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3368A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16342A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16342A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+43A>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 2759
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2714
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genotype depth: GenotypeDepth
  all individuals: 252
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2003
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genotype depth: GenotypeDepth
  all individuals: 441
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genotype depth: GenotypeDepth
  all individuals: 594
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
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genotype depth: GenotypeDepth
  all individuals: 79
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genotype depth: GenotypeDepth
  all individuals: 206
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genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 828
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 107
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genotype quality: GenotypeQuality
  all individuals: 56
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genotype quality: GenotypeQuality
  all individuals: 2447
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genotype quality: GenotypeQuality
  all individuals: 1446
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 301
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1072
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genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

1-71334890-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334890
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334890
    reference: chr 1
allele count: 1
allele frequency: 6.738544474393532e-5
allele num: 14840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+37T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3374T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16348T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16348T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+37T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16348T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16348T>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 859
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 1.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 189
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2706
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 24
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

1-71334894-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334894
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334894
    reference: chr 1
allele count: 24
allele frequency: 1.601281024819856e-3
allele num: 14988
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16352A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3378A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16352A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+33A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+33A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16352A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16352A>G
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2815
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 9.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP

1-71334915-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334915
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334915
    reference: chr 1
allele count: 1
allele frequency: 6.198090987975704e-5
allele num: 16134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16373C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16373C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16373C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16373C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+12C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+12C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3399C>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

1-71334916-AACTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334916
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334912
    reference: chr 1
allele count: 1
allele frequency: 6.16294835449279e-5
allele num: 16226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16378_1105-16375delGAGT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+7_1153+10delGAGT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16378_*24-16375delGAGT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3404_1105-3401delGAGT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16378_*24-16375delGAGT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16378_1078-16375delGAGT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+7_1180+10delGAGT
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1180+7_1180+10delGAGT
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: AACTC
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

1-71334923-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334923
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334923
    reference: chr 1
allele count: 85
allele frequency: 5.015932963531216e-3
allele num: 16946
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16381A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+4A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+4A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16381A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3407A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16381A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16381A>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1180+4A>C
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

1-71334925-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334925
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334925
    reference: chr 1
allele count: 9
allele frequency: 5.243532975996271e-4
allele num: 17164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1153+2T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16383T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1180+2T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3409T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16383T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16383T>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16383T>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4106
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
hgvs: c.1180+2T>A
num of homozygotes: 1
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-71334939-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334939
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334939
    reference: chr 1
allele count: 2
allele frequency: 1.102779003087781e-4
allele num: 18136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16397A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16397A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1141A>T
  hgvsp: ENSP00000421583.1:p.Ser381Cys
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1168A>T
  hgvsp: ENSP00000424340.1:p.Ser390Cys
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3423A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16397A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16397A>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser390Cys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-71334975-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334975
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334975
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 18540
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16433T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1132T>G
  hgvsp: ENSP00000424340.1:p.Cys378Gly
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16433T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16433T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3459T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1105T>G
  hgvsp: ENSP00000421583.1:p.Cys369Gly
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16433T>G
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2238
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys378Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/1-71334994-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71334994
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71334994
    reference: chr 1
allele count: 16
allele frequency: 8.865248226950354e-4
allele num: 18048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1086G>T
  hgvsp: ENST00000479353.1:c.1086G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1113G>T
  hgvsp: ENST00000361210.2:c.1113G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3478G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16452G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16452G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16452G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16452G>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 9.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly371Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-71335009-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71335009
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71335009
    reference: chr 1
allele count: 1
allele frequency: 5.814629608093964e-5
allele num: 17198
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16467A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16467A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16467A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-7A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3493A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-7A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16467A>G
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2238
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1105-7A>G
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-71335018-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71335018
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71335018
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 16604
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16476G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-16G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16476G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-16G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16476G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16476G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3502G>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

1-71335028-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71335028
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71335028
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 16154
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16486A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3512A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16486A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-26A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-26A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16486A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16486A>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2793
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

1-71335032-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71335032
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71335032
    reference: chr 1
allele count: 38
allele frequency: 2.38513683153402e-3
allele num: 15932
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16490T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16490T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16490T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-30T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16490T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3516T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-30T>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1933
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 9.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

1-71335037-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71335037
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71335037
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 15542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-35C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-16495C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-16495C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-16495C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-35C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-16495C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-3521C>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-71349613-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71349613
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71349613
    reference: chr 1
allele count: 24
allele frequency: 5.454545454545454e-1
allele num: 44
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-31071G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-14611G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-14611G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-31071G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.*19G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-31071G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-31071G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-18097G>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4910
  bin: 2.5e0
  variant carriers: 400
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.5e0
  variant carriers: 379
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 6.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.25e1
  variant carriers: 102
num of homozygotes: 3
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

1-71349706-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71349706
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71349706
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 1040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-18190C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-31164C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-31164C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-31164C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1216C>T
  hgvsp: ENSP00000346624.5:p.Pro406Ser
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-31164C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-14704C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-14704C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3002
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro406Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-71349718-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71349718
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71349718
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 1142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-14716C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-31176C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-14716C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-31176C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-31176C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1204C>T
  hgvsp: ENSP00000346624.5:p.Arg402Cys
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-31176C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-18202C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg402Cys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-71349770-A-AAAAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71349770
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71349774
    reference: chr 1
allele count: 81
allele frequency: 7.336956521739131e-2
allele num: 1104
alternate allele: AAAAC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-31232_*24-31229dupGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-31232_1078-31229dupGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-14772_1078-14769dupGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-18258_1105-18255dupGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1156-8_1156-5dupGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-31232_1105-31229dupGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-31232_*24-31229dupGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-14772_1105-14769dupGTTT
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 7.5e0
  variant carriers: 319
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 2.5e0
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2092
  bin: 2.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 2800
  bin: 7.5e0
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 6.25e1
  variant carriers: 3
num of homozygotes: 2
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-71349770-AAAAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71349770
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71349766
    reference: chr 1
allele count: 23
allele frequency: 2.083333333333333e-2
allele num: 1104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-31232_1105-31229delGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-14772_1105-14769delGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1156-8_1156-5delGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-14772_1078-14769delGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-31232_*24-31229delGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-31232_*24-31229delGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-31232_1078-31229delGTTT
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-18258_1105-18255delGTTT
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 2.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 7.5e0
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2800
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.75e1
  variant carriers: 4
hgvs: c.1156-8_1156-5delGTTT
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: AAAAC
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

1-71349774-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71349774
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71349774
    reference: chr 1
allele count: 56
allele frequency: 5.384615384615385e-2
allele num: 1040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-31232G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-31232G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1156-8G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-18258G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-31232G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-31232G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-14772G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-14772G>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 7.5e0
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 2.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 1.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 5
hgvs: c.1156-8G>A
num of homozygotes: 2
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

1-71349777-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71349777
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71349777
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 1304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-14775T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1156-11T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-18261T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-14775T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-31235T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-31235T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-31235T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-31235T>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3745
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-71351912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71351912
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71351912
    reference: chr 1
allele count: 2
allele frequency: 2.68889486421081e-4
allele num: 7438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-16910C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-33370C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-33370C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-20396C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-16910C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1155+49C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-33370C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-33370C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
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genotype quality: GenotypeQuality
  all individuals: 703
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 41
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

1-71351933-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71351933
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71351933
    reference: chr 1
allele count: 1
allele frequency: 1.264862130027827e-4
allele num: 7906
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-16931T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-20417T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-16931T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-33391T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1155+28T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-33391T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-33391T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-33391T>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 104
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

1-71351968-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71351968
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71351968
    reference: chr 1
allele count: 5
allele frequency: 5.170630816959669e-4
allele num: 9670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-33426G>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-33426G>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-20452G>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-33426G>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-33426G>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-16966G>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-16966G>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1148G>C
  hgvsp: ENSP00000346624.5:p.Arg383Pro
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
  all individuals: 3312
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 554
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2016
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 50
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genotype quality: GenotypeQuality
  all individuals: 163
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genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg383Pro
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

1-71351969-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71351969
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71351969
    reference: chr 1
allele count: 1
allele frequency: 1.033484911120298e-4
allele num: 9676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-16967C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-16967C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1147C>T
  hgvsp: ENSP00000346624.5:p.Arg383Trp
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-33427C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-33427C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-33427C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-33427C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-20453C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg383Trp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

1-71351978-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71351978
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71351978
    reference: chr 1
allele count: 5
allele frequency: 5.097879282218597e-4
allele num: 9808
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-20462C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-16976C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-33436C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-33436C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-33436C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1138C>T
  hgvsp: ENSP00000346624.5:p.Gln380Ter
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-16976C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-33436C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3602
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln380Ter
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-71352000-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71352000
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71352000
    reference: chr 1
allele count: 1
allele frequency: 1.082954299328568e-4
allele num: 9234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-16998G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-33458G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-20484G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-16998G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-33458G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-33458G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1116G>A
  hgvsp: ENST00000354608.5:c.1116G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-33458G>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro372Pro
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

1-71352026-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71352026
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71352026
    reference: chr 1
allele count: 1
allele frequency: 1.310272536687631e-4
allele num: 7632
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-33484A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-33484A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-33484A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-17024A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1105-15A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-17024A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-20510A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-33484A>C
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-71352052-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71352052
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71352052
    reference: chr 1
allele count: 6
allele frequency: 1.105379513633014e-3
allele num: 5428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-33510C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-33510C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-17050C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-20536C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1105-41C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-33510C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-33510C>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-17050C>A
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

1-71352058-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71352058
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71352058
    reference: chr 1
allele count: 1
allele frequency: 1.896813353566009e-4
allele num: 5272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1105-47A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1078-33516A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1105-17056A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*24-33516A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1105-33516A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1078-17056A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*24-33516A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1105-20542A>G
  variant of: http://identifiers.org/hgnc/9595
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

1-71418548-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418548
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418549
    reference: chr 1
allele count: 1
allele frequency: 8.511652452207071e-6
allele num: 117486
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+897dupG
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+897dupG
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*217dupG
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+897dupG
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+897dupG
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59439dupG
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*41dupG
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59439dupG
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+897dupG
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+897dupG
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13518
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2913
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-71418553-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418553
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418553
    reference: chr 1
allele count: 1
allele frequency: 8.498342823149486e-6
allele num: 117670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*213A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+893A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+893A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+893A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59435A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59435A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+893A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+893A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*37A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+893A>G
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-71418556-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418556
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418556
    reference: chr 1
allele count: 2
allele frequency: 1.699610789129289e-5
allele num: 117674
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*34T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59432T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+890T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59432T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*210T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+890T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+890T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+890T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+890T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+890T>C
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9259
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12322
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-71418560-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418560
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418560
    reference: chr 1
allele count: 1
allele frequency: 8.492713252029759e-6
allele num: 117748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+886G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59428G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+886G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+886G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+886G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+886G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*206G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59428G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*30G>A
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+886G>A
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12340
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

1-71418564-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418564
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418564
    reference: chr 1
allele count: 2
allele frequency: 1.691761123329386e-5
allele num: 118220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*202C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59424C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59424C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+882C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+882C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*26C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+882C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+882C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+882C>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+882C>T
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31745
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

1-71418571-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418571
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418571
    reference: chr 1
allele count: 1
allele frequency: 8.39348665435622e-6
allele num: 119140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*195A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+875A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+875A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+875A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59417A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+875A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+875A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+875A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*19A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59417A>C
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2926
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

1-71418572-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418572
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418572
    reference: chr 1
allele count: 1
allele frequency: 8.396446623788812e-6
allele num: 119098
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+874C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59416C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*18C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+874C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59416C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*194C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+874C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+874C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+874C>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+874C>G
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12480
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

1-71418577-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418577
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418577
    reference: chr 1
allele count: 1
allele frequency: 8.35952651641811e-6
allele num: 119624
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+869A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+869A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*13A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+869A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+869A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59411A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*189A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59411A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+869A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+869A>C
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3750
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33477
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

1-71418578-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418578
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418579
    reference: chr 1
allele count: 1
allele frequency: 8.355196096452384e-6
allele num: 119686
alternate allele: AT
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*11dupA
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+867dupA
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+867dupA
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+867dupA
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+867dupA
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+867dupA
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*187dupA
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+867dupA
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59409dupA
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59409dupA
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

1-71418579-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418579
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418579
    reference: chr 1
allele count: 1
allele frequency: 8.349893956346754e-6
allele num: 119762
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+867A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*187A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*11A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+867A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59409A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+867A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+867A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+867A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+867A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59409A>G
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5753
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-71418584-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418584
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418584
    reference: chr 1
allele count: 1
allele frequency: 8.325562808045825e-6
allele num: 120112
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+862A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+862A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59404A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+862A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+862A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+862A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*182A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.*6A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59404A>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+862A>C
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12577
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/1-71418603-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418603
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418603
    reference: chr 1
allele count: 1
allele frequency: 8.263779852904718e-6
allele num: 121010
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+843T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59385T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+843T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.1244T>G
  hgvsp: ENSP00000349003.4:p.Val415Gly
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+843T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*163T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59385T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+843T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+843T>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+843T>G
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34922
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val415Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-71418604-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418604
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418604
    reference: chr 1
allele count: 1
allele frequency: 8.26296045347127e-6
allele num: 121022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59384G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+842G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+842G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+842G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.1243G>T
  hgvsp: ENSP00000349003.4:p.Val415Leu
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*162G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+842G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59384G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+842G>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+842G>T
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val415Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD

1-71418608-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418608
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418608
    reference: chr 1
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.1239A>T
  hgvsp: ENST00000356595.4:c.1239A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+838A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*158A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+838A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+838A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+838A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+838A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+838A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59380A>T
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59380A>T
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser413Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

1-71418613-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418613
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418613
    reference: chr 1
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+833A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59375A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*153A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+833A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+833A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.1234A>G
  hgvsp: ENSP00000349003.4:p.Ile412Val
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+833A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+833A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59375A>G
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+833A>G
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile412Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-71418626-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71418626
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 71418626
    reference: chr 1
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000349003
  ensembl transcript: ENST00000356595
  gene symbol: PTGER3
  hgvsc: ENST00000356595.4:c.1221T>C
  hgvsp: ENST00000356595.4:c.1221T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000423561
  ensembl transcript: ENST00000497146
  gene symbol: PTGER3
  hgvsc: ENST00000497146.1:c.1104+820T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000280208
  ensembl transcript: ENST00000351052
  gene symbol: PTGER3
  hgvsc: ENST00000351052.5:c.*23+820T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359969
  ensembl transcript: ENST00000370931
  gene symbol: PTGER3
  hgvsc: ENST00000370931.3:c.*23+820T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000424340
  ensembl transcript: ENST00000361210
  gene symbol: PTGER3
  hgvsc: ENST00000361210.2:c.1104+820T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000418073
  ensembl transcript: ENST00000460330
  gene symbol: PTGER3
  hgvsc: ENST00000460330.1:c.1104+820T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000346624
  ensembl transcript: ENST00000354608
  gene symbol: PTGER3
  hgvsc: ENST00000354608.5:c.1104+820T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000359970
  ensembl transcript: ENST00000370932
  gene symbol: PTGER3
  hgvsc: ENST00000370932.2:c.1077+59362T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000401423
  ensembl transcript: ENST00000414819
  gene symbol: PTGER3
  hgvsc: ENST00000414819.1:c.*140T>C
  variant of: http://identifiers.org/hgnc/9595
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050628
  ensembl protein: ENSP00000421583
  ensembl transcript: ENST00000479353
  gene symbol: PTGER3
  hgvsc: ENST00000479353.1:c.1077+59362T>C
  variant of: http://identifiers.org/hgnc/9595
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn407Asn
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2275
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4965
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.4e-1

MQ
type: SiteQuality
SIO_000300: 5.916e1

MQRankSum
type: SiteQuality
SIO_000300: -7.33e-1

FS
type: SiteQuality
SIO_000300: 1.786e0

QD
type: SiteQuality
SIO_000300: 1.131e1

DP
type: SiteQuality
SIO_000300: 3.849582e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44882
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4908
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1169
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495863805299125e-5
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.113e0

DP
type: SiteQuality
SIO_000300: 3.849349e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 1.398e1

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

FS
type: SiteQuality
SIO_000300: 4.848e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 2240
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44590
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 4883
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.047044632086852e-5
allele num: 66320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.704968944099378e-5
allele num: 10304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e0

DP
type: SiteQuality
SIO_000300: 3.867609e6

QD
type: SiteQuality
SIO_000300: 1.304e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

FS
type: SiteQuality
SIO_000300: 5.45e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.292e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.334e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e0

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 943
bin: 7.25e1
variant carriers: 5

GenotypeQuality
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bin: 3.25e1
variant carriers: 3

GenotypeQuality
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bin: 7.75e1
variant carriers: 5

GenotypeQuality
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bin: 9.25e1
variant carriers: 15

GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 5

GenotypeQuality
all individuals: 48715
bin: 9.75e1
variant carriers: 25961

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3208
bin: 6.25e1
variant carriers: 5

East Asian
type: Population
allele count: 2413
allele frequency: 2.795412418906395e-1
allele num: 8632
num of homozygotes: 320

African
type: Population
allele count: 1323
allele frequency: 1.283967391304348e-1
allele num: 10304
num of homozygotes: 91

South Asian
type: Population
allele count: 4327
allele frequency: 2.62210641134408e-1
allele num: 16502
num of homozygotes: 572

Latino
type: Population
allele count: 5391
allele frequency: 4.670767631259747e-1
allele num: 11542
num of homozygotes: 1311

European (Non-Finnish)
type: Population
allele count: 15579
allele frequency: 2.349065138721351e-1
allele num: 66320
num of homozygotes: 1881

European (Finnish)
type: Population
allele count: 1059
allele frequency: 1.614821591948765e-1
allele num: 6558
num of homozygotes: 68

Other
type: Population
allele count: 218
allele frequency: 2.427616926503341e-1
allele num: 898
num of homozygotes: 34

QD
type: SiteQuality
SIO_000300: 1.658e1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.46e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 1.142e0

DP
type: SiteQuality
SIO_000300: 4.791527e6

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40863
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variant carriers: 1

GenotypeQuality
all individuals: 2749
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variant carriers: 0

GenotypeQuality
all individuals: 3105
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.24e-1

FS
type: SiteQuality
SIO_000300: 1.838e0

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 3.54249e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.141e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.142e1

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40780
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2738
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.02e0

FS
type: SiteQuality
SIO_000300: 9.917e0

VQSLOD
type: SiteQuality
SIO_000300: -1.172e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.546e0

QD
type: SiteQuality
SIO_000300: 2.807e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 3.543405e6

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.499e0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2747
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2931
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2724
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.26e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 3.542111e6

FS
type: SiteQuality
SIO_000300: 3.153e0

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

GenotypeQuality
all individuals: 1566
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 2670
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3080
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 894
allele frequency: 1.340691640922588e-2
allele num: 66682
num of homozygotes: 6

Other
type: Population
allele count: 4
allele frequency: 4.405286343612335e-3
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 92
allele frequency: 7.959854646132549e-3
allele num: 11558
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.512401693889897e-3
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 118
allele frequency: 7.149781871061561e-3
allele num: 16504
num of homozygotes: 4

African
type: Population
allele count: 29
allele frequency: 2.789534436321662e-3
allele num: 10396
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

DP
type: SiteQuality
SIO_000300: 3.552175e6

QD
type: SiteQuality
SIO_000300: 1.355e1

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

FS
type: SiteQuality
SIO_000300: 2.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41003
bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 1641
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 4717
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GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 1566
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variant carriers: 0

GenotypeQuality
all individuals: 2915
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 2.1e0

VQSLOD
type: SiteQuality
SIO_000300: 3.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

QD
type: SiteQuality
SIO_000300: 1.355e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

DP
type: SiteQuality
SIO_000300: 3.552175e6

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 2716
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.998620317327015e-5
allele num: 66682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.771450557906887e-4
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.523774e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 6.306e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

QD
type: SiteQuality
SIO_000300: 1.346e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.65e-1

GenotypeQuality
all individuals: 4748
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 43
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GenotypeQuality
all individuals: 40635
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GenotypeQuality
all individuals: 99
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
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variant carriers: 0

GenotypeQuality
all individuals: 3135
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817961459217065e-4
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

FS
type: SiteQuality
SIO_000300: 3.575e0

MQ
type: SiteQuality
SIO_000300: 6.051e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.328e0

QD
type: SiteQuality
SIO_000300: 1.575e1

DP
type: SiteQuality
SIO_000300: 3.523017e6

GenotypeQuality
all individuals: 3136
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40627
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1680
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2963
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

FS
type: SiteQuality
SIO_000300: 8.52e0

VQSLOD
type: SiteQuality
SIO_000300: 7.15e-1

DP
type: SiteQuality
SIO_000300: 3.522151e6

MQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.548e0

QD
type: SiteQuality
SIO_000300: 1.22e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40612
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.11e-1

FS
type: SiteQuality
SIO_000300: 1.4443e1

DP
type: SiteQuality
SIO_000300: 3.518892e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 9.58e0

VQSLOD
type: SiteQuality
SIO_000300: -2.152e0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2715
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

QD
type: SiteQuality
SIO_000300: 1.628e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.511e0

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.11e-1

DP
type: SiteQuality
SIO_000300: 3.517413e6

FS
type: SiteQuality
SIO_000300: 7.797e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4507
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 3.516912e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.529e1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.41e0

GenotypeQuality
all individuals: 202
bin: 5.25e1
variant carriers: 201

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 6

GenotypeQuality
all individuals: 679
bin: 7.75e1
variant carriers: 659

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 11

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 27

GenotypeQuality
all individuals: 153
bin: 4.75e1
variant carriers: 153

GenotypeQuality
all individuals: 522
bin: 8.75e1
variant carriers: 516

GenotypeQuality
all individuals: 455
bin: 6.25e1
variant carriers: 318

GenotypeQuality
all individuals: 481
bin: 6.75e1
variant carriers: 439

GenotypeQuality
all individuals: 861
bin: 8.25e1
variant carriers: 852

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 68

European (Non-Finnish)
type: Population
allele count: 61256
allele frequency: 9.186562687462507e-1
allele num: 66680
num of homozygotes: 28118

Other
type: Population
allele count: 843
allele frequency: 9.284140969162996e-1
allele num: 908
num of homozygotes: 393

South Asian
type: Population
allele count: 16040
allele frequency: 9.71885603490063e-1
allele num: 16504
num of homozygotes: 7799

European (Finnish)
type: Population
allele count: 5922
allele frequency: 8.959152798789712e-1
allele num: 6610
num of homozygotes: 2658

African
type: Population
allele count: 10213
allele frequency: 9.839113680154142e-1
allele num: 10380
num of homozygotes: 5024

Latino
type: Population
allele count: 11241
allele frequency: 9.727414330218068e-1
allele num: 11556
num of homozygotes: 5469

East Asian
type: Population
allele count: 8641
allele frequency: 9.99884286044897e-1
allele num: 8642
num of homozygotes: 4320

DP
type: SiteQuality
SIO_000300: 3.79483e6

VQSLOD
type: SiteQuality
SIO_000300: 3.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.81e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

QD
type: SiteQuality
SIO_000300: 3.372e1

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
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variant carriers: 0

GenotypeQuality
all individuals: 190
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variant carriers: 0

GenotypeQuality
all individuals: 224
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GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 5251
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variant carriers: 2

GenotypeQuality
all individuals: 114
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variant carriers: 0

GenotypeQuality
all individuals: 571
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variant carriers: 0

GenotypeQuality
all individuals: 9494
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.732099196646873e-5
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517220452131695e-5
allele num: 65910
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.010188e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.243e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.63e-1

FS
type: SiteQuality
SIO_000300: 4.042e0

MQ
type: SiteQuality
SIO_000300: 5.895e1

QD
type: SiteQuality
SIO_000300: 1.144e1

GenotypeQuality
all individuals: 159
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6282
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variant carriers: 0

GenotypeQuality
all individuals: 1212
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1763
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variant carriers: 0

GenotypeQuality
all individuals: 2032
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variant carriers: 0

GenotypeQuality
all individuals: 27700
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variant carriers: 0

GenotypeQuality
all individuals: 465
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variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11114
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64202
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.012841091492777e-4
allele num: 9968
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.604e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 1.309e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.882e0

FS
type: SiteQuality
SIO_000300: 1.9278e1

MQRankSum
type: SiteQuality
SIO_000300: -3.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.813657e6

GenotypeQuality
all individuals: 630
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1634
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variant carriers: 0

GenotypeQuality
all individuals: 473
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variant carriers: 0

GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
all individuals: 208
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 627
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variant carriers: 0

GenotypeQuality
all individuals: 6889
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variant carriers: 0

GenotypeQuality
all individuals: 26002
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.239157372986369e-4
allele num: 8070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11076
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63986
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.599e0

FS
type: SiteQuality
SIO_000300: 2.527e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.007e0

DP
type: SiteQuality
SIO_000300: 1.781545e6

MQRankSum
type: SiteQuality
SIO_000300: -1.644e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 8.470000000000001e0

GenotypeQuality
all individuals: 279
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1122
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variant carriers: 0

GenotypeQuality
all individuals: 1707
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4216
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5157
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GenotypeQuality
all individuals: 6231
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variant carriers: 0

GenotypeQuality
all individuals: 607
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variant carriers: 0

GenotypeQuality
all individuals: 16724
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.179364787956673e-5
allele num: 10894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.54273372415921e-4
allele num: 6482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7886
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.691e0

QD
type: SiteQuality
SIO_000300: 7.98e0

DP
type: SiteQuality
SIO_000300: 1.641564e6

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

GenotypeQuality
all individuals: 7916
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3373
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12132
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GenotypeQuality
all individuals: 1080
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GenotypeQuality
all individuals: 1578
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GenotypeQuality
all individuals: 286
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GenotypeQuality
all individuals: 6246
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variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.598823266076168e-5
allele num: 62546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.162e1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.341e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

DP
type: SiteQuality
SIO_000300: 1.595103e6

GenotypeQuality
all individuals: 653
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5155
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9680
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.37031484257871e-5
allele num: 10672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.693e0

DP
type: SiteQuality
SIO_000300: 1.584629e6

MQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.029e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.08e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6598
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variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10472
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.65335994677312e-5
allele num: 15030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7512
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.568051e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

VQSLOD
type: SiteQuality
SIO_000300: -1.352e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.906e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.95e-1

GenotypeQuality
all individuals: 1023
bin: 3.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 6.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4388
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 2.198768689533861e-3
allele num: 2274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.645502645502645e-3
allele num: 378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.433484750162232e-3
allele num: 6164
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 7.246376811594203e-3
allele num: 138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.4111e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: -3.596e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.399999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.05e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.188e0

QD
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 2.79088e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
all individuals: 174
bin: 6.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 108
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variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4712
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.187604690117253e-4
allele num: 2388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.059975520195838e-4
allele num: 6536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.498e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.816e0

DP
type: SiteQuality
SIO_000300: 2.80831e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.816e0

FS
type: SiteQuality
SIO_000300: 2.1825e1

QD
type: SiteQuality
SIO_000300: 1.76e0

GenotypeQuality
all individuals: 834
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
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variant carriers: 0

GenotypeQuality
all individuals: 218
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 839
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 103
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variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.035830618892508e-4
allele num: 4912
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.37e1

VQSLOD
type: SiteQuality
SIO_000300: -5.031e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.64e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.445e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

MQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.84047e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 686
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 109
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 4.163197335553705e-4
allele num: 2402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.191540065534704e-3
allele num: 6714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 2.586549940310386e-3
allele num: 5026
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 7.936507936507936e-3
allele num: 252
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.72e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.493e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.86891e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 512
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GenotypeQuality
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GenotypeQuality
all individuals: 2465
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GenotypeQuality
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GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 275
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2412
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.71174255391989e-4
allele num: 5842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.306e1

FS
type: SiteQuality
SIO_000300: 3.258e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.10693e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 263
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.420454545454545e-4
allele num: 7040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 2412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.249e1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.84e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.14e-2

FS
type: SiteQuality
SIO_000300: 4.111e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 331
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 186
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variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 4.13564929693962e-4
allele num: 2418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.781641168289291e-4
allele num: 7190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

South Asian
type: Population
allele count: 82
allele frequency: 1.275272161741835e-2
allele num: 6430
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

QD
type: SiteQuality
SIO_000300: 1.284e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

InbreedingCoeff
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SIO_000300: -1.56e-2

ClippingRankSum
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1911
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 7.75e1
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GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 9
allele frequency: 1.371115173674589e-3
allele num: 6564
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.525e1

FS
type: SiteQuality
SIO_000300: 4.842e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.007e0

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

MQ
type: SiteQuality
SIO_000300: 5.879e1

DP
type: SiteQuality
SIO_000300: 3.26425e5

GenotypeQuality
all individuals: 1373
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.795638803466592e-4
allele num: 7154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.39013e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.71e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

GenotypeQuality
all individuals: 141
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7708
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.36e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 1.138e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

FS
type: SiteQuality
SIO_000300: 5.827e0

DP
type: SiteQuality
SIO_000300: 3.44885e5

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.5e0
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GenotypeQuality
all individuals: 116
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 4732
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 7
allele frequency: 9.754738015607581e-4
allele num: 7176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.328374070138151e-4
allele num: 7528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 1.680672268907563e-2
allele num: 476
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.31e0

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.013e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 3.36886e5

QD
type: SiteQuality
SIO_000300: 1.232e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.39e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

GenotypeQuality
all individuals: 2307
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 389
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GenotypeQuality
all individuals: 45
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.497005988023952e-4
allele num: 6680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.65e0

MQ
type: SiteQuality
SIO_000300: 5.777e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e0

DP
type: SiteQuality
SIO_000300: 3.17163e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.897e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.088e0

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1860
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variant carriers: 0

GenotypeQuality
all individuals: 113
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variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2058
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7060
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.583e0

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.74e-1

FS
type: SiteQuality
SIO_000300: 7.508e0

DP
type: SiteQuality
SIO_000300: 3.03001e5

QD
type: SiteQuality
SIO_000300: 1.289e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.59e-2

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 9.25e1
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GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 2237
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
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GenotypeQuality
all individuals: 196
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.62e-1

QD
type: SiteQuality
SIO_000300: 2.297e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.90674e5

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.67e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.179e0

VQSLOD
type: SiteQuality
SIO_000300: -3.137e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 1

African
type: Population
allele count: 38
allele frequency: 1.666666666666667e-2
allele num: 2280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6856
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.4e0

DP
type: SiteQuality
SIO_000300: 2.88826e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.59e-2

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

QD
type: SiteQuality
SIO_000300: 1.621e1

GenotypeQuality
all individuals: 2552
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 803
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6730
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.173e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-2

MQ
type: SiteQuality
SIO_000300: 5.682e1

DP
type: SiteQuality
SIO_000300: 2.84787e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.812e1

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 11

GenotypeQuality
all individuals: 3580
bin: 7.5e0
variant carriers: 197

GenotypeQuality
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bin: 2.25e1
variant carriers: 63

GenotypeQuality
all individuals: 173
bin: 1.75e1
variant carriers: 108

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 13

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 53

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 10
bin: 7.25e1
variant carriers: 10

GenotypeQuality
all individuals: 17
bin: 8.25e1
variant carriers: 17

GenotypeQuality
all individuals: 13
bin: 7.75e1
variant carriers: 13

GenotypeQuality
all individuals: 7
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 78

GenotypeQuality
all individuals: 31
bin: 9.75e1
variant carriers: 31

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 6.25e-1
allele num: 8
num of homozygotes: 1

South Asian
type: Population
allele count: 4
allele frequency: 4.0e-1
allele num: 10
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 14
allele frequency: 5.833333333333334e-1
allele num: 24
num of homozygotes: 2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
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MQRankSum
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SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

QD
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MQ
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.398e-1

DP
type: SiteQuality
SIO_000300: 1.905e4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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QD
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MQ
type: SiteQuality
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MQRankSum
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SIO_000300: -1.001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 4.2128e4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
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variant carriers: 30

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

Latino
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allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

East Asian
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allele count: 21
allele frequency: 1.875e-1
allele num: 112
num of homozygotes: 2

South Asian
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allele count: 56
allele frequency: 8.30860534124629e-2
allele num: 674
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Other
type: Population
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allele frequency: 0.0e0
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African
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allele frequency: 4.545454545454546e-2
allele num: 22
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 7.142857142857143e-3
allele num: 280
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.824e1

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.545e-1

FS
type: SiteQuality
SIO_000300: 1.862e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 4.0044e4

QD
type: SiteQuality
SIO_000300: 1.469e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 2.670623145400593e-2
allele num: 674
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 1.428571428571429e-2
allele num: 280
num of homozygotes: 0

African
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allele count: 1
allele frequency: 4.545454545454546e-2
allele num: 22
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 1.862e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.545e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.0044e4

MQ
type: SiteQuality
SIO_000300: 5.824e1

QD
type: SiteQuality
SIO_000300: 1.469e1

GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

European (Non-Finnish)
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allele count: 7
allele frequency: 2.777777777777778e-2
allele num: 252
num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 8.333333333333333e-2
allele num: 12
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South Asian
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allele count: 21
allele frequency: 3.28125e-2
allele num: 640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.25e-1
allele num: 24
num of homozygotes: 0

East Asian
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allele count: 24
allele frequency: 2.142857142857143e-1
allele num: 112
num of homozygotes: 2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

VQSLOD
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InbreedingCoeff
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SIO_000300: -2.85e-2

FS
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MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 322
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European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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allele frequency: 0.0e0
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East Asian
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DP
type: SiteQuality
SIO_000300: 3.7777e4

MQRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
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FS
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MQ
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InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 2.196836555360281e-4
allele num: 4552
num of homozygotes: 0

European (Finnish)
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African
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allele frequency: 0.0e0
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East Asian
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Other
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.699248120300752e-4
allele num: 2128
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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ReadPosRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
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allele num: 0
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Latino
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African
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South Asian
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Other
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QD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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DP
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.681885125184094e-4
allele num: 2716
num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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South Asian
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allele frequency: 6.523157208088715e-4
allele num: 6132
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.58e-1

FS
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QD
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -2.96e-2

VQSLOD
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MQRankSum
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MQ
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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allele frequency: 1.628664495114007e-4
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African
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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FS
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ReadPosRankSum
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QD
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MQ
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BaseQRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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allele frequency: 7.462686567164179e-3
allele num: 402
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Latino
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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VQSLOD
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.819709702062643e-4
allele num: 2618
num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
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Other
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East Asian
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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VQSLOD
type: SiteQuality
SIO_000300: -2.357e-1

InbreedingCoeff
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DP
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BaseQRankSum
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ClippingRankSum
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MQ
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FS
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 1.515151515151515e-2
allele num: 66
num of homozygotes: 0

European (Finnish)
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African
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allele frequency: 0.0e0
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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allele num: 3022
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FS
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QD
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MQ
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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African
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Other
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South Asian
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European (Finnish)
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East Asian
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InbreedingCoeff
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MQ
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VQSLOD
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QD
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ClippingRankSum
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FS
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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InbreedingCoeff
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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African
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MQ
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ClippingRankSum
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.522487134983709e-5
allele num: 65682
num of homozygotes: 0

East Asian
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South Asian
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African
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BaseQRankSum
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InbreedingCoeff
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MQ
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DP
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MQRankSum
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FS
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VQSLOD
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 0.0e0
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African
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Latino
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Other
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European (Non-Finnish)
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InbreedingCoeff
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FS
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MQRankSum
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ClippingRankSum
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QD
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VQSLOD
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MQ
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Other
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Latino
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South Asian
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VQSLOD
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ReadPosRankSum
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QD
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ClippingRankSum
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FS
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MQ
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BaseQRankSum
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MQRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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Latino
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East Asian
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InbreedingCoeff
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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MQRankSum
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QD
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VQSLOD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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African
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East Asian
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Latino
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ClippingRankSum
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QD
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FS
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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Other
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European (Non-Finnish)
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Latino
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European (Finnish)
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ReadPosRankSum
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MQ
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BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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Other
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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QD
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ClippingRankSum
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FS
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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South Asian
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Latino
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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VQSLOD
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MQ
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QD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15808
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.887e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

VQSLOD
type: SiteQuality
SIO_000300: 3.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.391e0

MQRankSum
type: SiteQuality
SIO_000300: -7.43e-1

FS
type: SiteQuality
SIO_000300: 4.603e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.142224e6

QD
type: SiteQuality
SIO_000300: 1.171e1

GenotypeQuality
all individuals: 3751
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2899
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.915e1

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-2

DP
type: SiteQuality
SIO_000300: 2.155376e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 6.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

QD
type: SiteQuality
SIO_000300: 9.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1777
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2898
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3177
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503714174009804e-5
allele num: 66502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.619e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.081e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: -8.971e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.52e-1

FS
type: SiteQuality
SIO_000300: 7.3e-1

DP
type: SiteQuality
SIO_000300: 2.155971e6

QD
type: SiteQuality
SIO_000300: 1.433e1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12691
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2898
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1778
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3750
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3180
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 2.156468e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-1

FS
type: SiteQuality
SIO_000300: 5.262e0

QD
type: SiteQuality
SIO_000300: 1.272e1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3751
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502313562886846e-5
allele num: 66564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

FS
type: SiteQuality
SIO_000300: 5.471e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

DP
type: SiteQuality
SIO_000300: 2.157104e6

QD
type: SiteQuality
SIO_000300: 1.35e1