2-179203852-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179203852
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179203852
    reference: chr 2
allele count: 2
allele frequency: 1.763637325620359e-5
allele num: 113402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+31C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+31C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.894+31C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.894+31C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.894+31C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.894+31C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.831+31C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16187
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5733
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4082
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11093
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20954
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3230
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5888
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum

2-179203856-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179203856
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179203856
    reference: chr 2
allele count: 1
allele frequency: 8.892683100345036e-6
allele num: 112452
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+35G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+35G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.831+35G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.894+35G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.894+35G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.894+35G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.894+35G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11535
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4831
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4044
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16748
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11301
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

2-179203861-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179203861
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179203861
    reference: chr 2
allele count: 1
allele frequency: 9.00835975785529e-6
allele num: 111008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.894+40T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+40T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.894+40T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.831+40T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.894+40T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+40T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.894+40T>C
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15743
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4832
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11115
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6423
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

2-179203870-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179203870
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179203870
    reference: chr 2
allele count: 3
allele frequency: 2.838704793626161e-5
allele num: 105682
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.894+49A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+49A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+49A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.894+49A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.831+49A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.894+49A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.894+49A>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16280
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10401
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5023
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3225
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3544
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1905
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8238
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

2-179203871-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179203871
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179203871
    reference: chr 2
allele count: 2
allele frequency: 1.884410273804813e-5
allele num: 106134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+50C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+50C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.894+50C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.894+50C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.894+50C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.894+50C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.831+50C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14680
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5514
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4757
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7530
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3537
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8810
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-179204348-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204348
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204348
    reference: chr 2
allele count: 1
allele frequency: 1.057641459545214e-5
allele num: 94550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.895-51C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+527C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.895-51C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.895-51C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.895-51C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+527C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.832-51C>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19490
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7384
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3143
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3565
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3304
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4644
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/2-179204360-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204360
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204360
    reference: chr 2
allele count: 1
allele frequency: 1.041146093619857e-5
allele num: 96048
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.895-39A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.895-39A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+539A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.895-39A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.895-39A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.832-39A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+539A>C
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16481
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6412
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4508
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11517
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-179204361-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204361
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204361
    reference: chr 2
allele count: 1
allele frequency: 1.03976043919481e-5
allele num: 96176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+540A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+540A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.895-38A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.895-38A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.895-38A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.895-38A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.832-38A>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6267
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17352
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4470
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7760
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

2-179204365-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204365
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204365
    reference: chr 2
allele count: 2
allele frequency: 2.064707947060888e-5
allele num: 96866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.832-34T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.895-34T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.895-34T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+544T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.895-34T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.895-34T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+544T>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11399
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7174
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11717
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1447
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20666
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ

2-179204370-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204370
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204370
    reference: chr 2
allele count: 16
allele frequency: 1.629394272679132e-4
allele num: 98196
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.895-29T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.832-29T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.895-29T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.895-29T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+549T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.895-29T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+549T>C
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13072
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23089
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25916
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3154
  bin: 9.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5854
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3788
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

2-179204374-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204374
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204374
    reference: chr 2
allele count: 3
allele frequency: 3.009449671969986e-5
allele num: 99686
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+553G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.895-25G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.895-25G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+553G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.895-25G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.832-25G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.895-25G>C
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26843
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10453
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10782
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2611
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD

2-179204379-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204379
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204379
    reference: chr 2
allele count: 79
allele frequency: 7.693356445864091e-4
allele num: 102686
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.832-20T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+558T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.895-20T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.895-20T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+558T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.895-20T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.895-20T>C
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31194
  bin: 2.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8981
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5973
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9513
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3281
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

2-179204399-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204399
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204399
    reference: chr 2
allele count: 1
allele frequency: 8.938148015731141e-6
allele num: 111880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.832G>A
  hgvsp: ENSP00000318723.2:p.Ala278Thr
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.895G>A
  hgvsp: ENSP00000376293.2:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.895G>A
  hgvsp: ENSP00000190611.4:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.895G>A
  hgvsp: ENSP00000352713.3:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+578G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.895G>A
  hgvsp: ENSP00000386885.1:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+578G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5055
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala299Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

2-179204408-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204408
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204408
    reference: chr 2
allele count: 1
allele frequency: 8.768699251153084e-6
allele num: 114042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+587G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.904G>A
  hgvsp: ENSP00000190611.4:p.Val302Ile
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+587G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.841G>A
  hgvsp: ENSP00000318723.2:p.Val281Ile
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.904G>A
  hgvsp: ENSP00000376293.2:p.Val302Ile
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.904G>A
  hgvsp: ENSP00000352713.3:p.Val302Ile
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.904G>A
  hgvsp: ENSP00000386885.1:p.Val302Ile
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8755
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3981
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2857
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val302Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/2-179204428-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204428
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204428
    reference: chr 2
allele count: 1
allele frequency: 8.632000552448036e-6
allele num: 115848
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.924C>A
  hgvsp: ENSP00000386885.1:p.Asp308Glu
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.924C>A
  hgvsp: ENSP00000190611.4:p.Asp308Glu
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.924C>A
  hgvsp: ENSP00000376293.2:p.Asp308Glu
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.924C>A
  hgvsp: ENSP00000352713.3:p.Asp308Glu
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+607C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.861C>A
  hgvsp: ENSP00000318723.2:p.Asp287Glu
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+607C>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47452
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp308Glu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/2-179204432-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204432
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204432
    reference: chr 2
allele count: 3
allele frequency: 2.590360405477749e-5
allele num: 115814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+611C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.928C>A
  hgvsp: ENST00000359685.3:c.928C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.928C>A
  hgvsp: ENST00000392505.2:c.928C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+611C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.928C>A
  hgvsp: ENST00000190611.4:c.928C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.865C>A
  hgvsp: ENST00000315022.2:c.865C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.928C>A
  hgvsp: ENST00000409631.1:c.928C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40688
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3348
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3163
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg310Arg
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

2-179204432-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204432
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204432
    reference: chr 2
allele count: 26
allele frequency: 2.244979018080716e-4
allele num: 115814
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+611C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.928C>T
  hgvsp: ENSP00000190611.4:p.Arg310Trp
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.865C>T
  hgvsp: ENSP00000318723.2:p.Arg289Trp
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.928C>T
  hgvsp: ENSP00000376293.2:p.Arg310Trp
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+611C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.928C>T
  hgvsp: ENSP00000352713.3:p.Arg310Trp
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.928C>T
  hgvsp: ENSP00000386885.1:p.Arg310Trp
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9734
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg310Trp
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum

2-179204433-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204433
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204433
    reference: chr 2
allele count: 2
allele frequency: 1.726787656921828e-5
allele num: 115822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.866G>A
  hgvsp: ENSP00000318723.2:p.Arg289Gln
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+612G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+612G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.929G>A
  hgvsp: ENSP00000190611.4:p.Arg310Gln
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.929G>A
  hgvsp: ENSP00000352713.3:p.Arg310Gln
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.929G>A
  hgvsp: ENSP00000386885.1:p.Arg310Gln
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.929G>A
  hgvsp: ENSP00000376293.2:p.Arg310Gln
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47451
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg310Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-179204433-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204433
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204433
    reference: chr 2
allele count: 22
allele frequency: 1.899466422614011e-4
allele num: 115822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.866G>C
  hgvsp: ENSP00000318723.2:p.Arg289Pro
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+612G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.929G>C
  hgvsp: ENSP00000352713.3:p.Arg310Pro
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+612G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.929G>C
  hgvsp: ENSP00000376293.2:p.Arg310Pro
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.929G>C
  hgvsp: ENSP00000386885.1:p.Arg310Pro
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.929G>C
  hgvsp: ENSP00000190611.4:p.Arg310Pro
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40614
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg310Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

2-179204433-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204433
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204433
    reference: chr 2
allele count: 1
allele frequency: 8.633938284609141e-6
allele num: 115822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.929G>T
  hgvsp: ENSP00000352713.3:p.Arg310Leu
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.866G>T
  hgvsp: ENSP00000318723.2:p.Arg289Leu
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+612G>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.929G>T
  hgvsp: ENSP00000190611.4:p.Arg310Leu
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.929G>T
  hgvsp: ENSP00000386885.1:p.Arg310Leu
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.929G>T
  hgvsp: ENSP00000376293.2:p.Arg310Leu
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+612G>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3154
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg310Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

2-179204434-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204434
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204434
    reference: chr 2
allele count: 11
allele frequency: 9.497332113070056e-5
allele num: 115822
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.930G>T
  hgvsp: ENST00000392505.2:c.930G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+613G>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.867G>T
  hgvsp: ENST00000315022.2:c.867G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.930G>T
  hgvsp: ENST00000359685.3:c.930G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+613G>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.930G>T
  hgvsp: ENST00000409631.1:c.930G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.930G>T
  hgvsp: ENST00000190611.4:c.930G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40569
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3430
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg310Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS

2-179204448-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204448
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204448
    reference: chr 2
allele count: 1
allele frequency: 8.729964730942487e-6
allele num: 114548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.881G>A
  hgvsp: ENSP00000318723.2:p.Trp294Ter
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.944G>A
  hgvsp: ENSP00000376293.2:p.Trp315Ter
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+627G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.944G>A
  hgvsp: ENSP00000386885.1:p.Trp315Ter
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.944G>A
  hgvsp: ENSP00000190611.4:p.Trp315Ter
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.944G>A
  hgvsp: ENSP00000352713.3:p.Trp315Ter
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+627G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10335
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46199
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4643
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Trp315Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

2-179204453-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204453
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204453
    reference: chr 2
allele count: 1
allele frequency: 8.791672527781685e-6
allele num: 113744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.949A>G
  hgvsp: ENSP00000386885.1:p.Thr317Ala
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.949A>G
  hgvsp: ENSP00000190611.4:p.Thr317Ala
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+632A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+632A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.949A>G
  hgvsp: ENSP00000352713.3:p.Thr317Ala
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.886A>G
  hgvsp: ENSP00000318723.2:p.Thr296Ala
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.949A>G
  hgvsp: ENSP00000376293.2:p.Thr317Ala
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10268
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45344
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2923
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr317Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

2-179204465-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204465
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204465
    reference: chr 2
allele count: 1
allele frequency: 9.010470166333279e-6
allele num: 110982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+644A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.961A>G
  hgvsp: ENSP00000386885.1:p.Ser321Gly
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.961A>G
  hgvsp: ENSP00000190611.4:p.Ser321Gly
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+644A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.961A>G
  hgvsp: ENSP00000352713.3:p.Ser321Gly
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.898A>G
  hgvsp: ENSP00000318723.2:p.Ser300Gly
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.961A>G
  hgvsp: ENSP00000376293.2:p.Ser321Gly
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5012
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9911
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8334
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser321Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

2-179204497-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204497
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204497
    reference: chr 2
allele count: 1
allele frequency: 1.056591014750011e-5
allele num: 94644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+6G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+6G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+6G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.924+6G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+676G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.987+6G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+676G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15348
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6448
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24748
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1677
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2884
  bin: 2.75e1
  variant carriers: 0
hgvs: c.987+6G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

2-179204510-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204510
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204510
    reference: chr 2
allele count: 2
allele frequency: 2.416334420683823e-5
allele num: 82770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+689C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.924+19C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+19C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+689C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+19C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.987+19C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+19C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4972
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23222
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8036
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4154
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

2-179204519-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204519
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204519
    reference: chr 2
allele count: 4047
allele frequency: 5.533980582524272e-2
allele num: 73130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+698C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.987+28C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.924+28C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+28C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+28C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+28C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+698C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 5049
  bin: 1.75e1
  variant carriers: 1212
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 2.25e1
  variant carriers: 489
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 16764
  bin: 7.5e0
  variant carriers: 801
genotype depth: GenotypeDepth
  all individuals: 22815
  bin: 1.25e1
  variant carriers: 1607
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 2.75e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5849
  bin: 2.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.75e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 4.25e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 6227
  bin: 9.75e1
  variant carriers: 3292
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 1.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 1146
  bin: 2.5e0
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 5.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 26473
  bin: 2.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 6787
  bin: 7.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 3960
  bin: 2.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 1.75e1
  variant carriers: 48
num of homozygotes: 333
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

2-179204520-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204520
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204520
    reference: chr 2
allele count: 2
allele frequency: 2.849165194597983e-5
allele num: 70196
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.924+29G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+29G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+29G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+699G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+699G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+29G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.987+29G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23013
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4326
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1941
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP

2-179204528-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204528
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204528
    reference: chr 2
allele count: 2
allele frequency: 3.266692800209068e-5
allele num: 61224
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.987+37A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+707A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+707A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+37A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.924+37A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+37A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+37A>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3062
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2311
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3679
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3084
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS

2-179204537-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204537
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204537
    reference: chr 2
allele count: 1
allele frequency: 1.824950726330389e-5
allele num: 54796
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+46A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+46A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+716A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.987+46A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+716A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.924+46A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+46A>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23475
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8723
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16452
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4461
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18757
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5359
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3961
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

2-179204541-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204541
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204541
    reference: chr 2
allele count: 2
allele frequency: 3.992812936713915e-5
allele num: 50090
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+50A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+50A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.987+50A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.924+50A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+50A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+720A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+720A>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24631
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14009
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4435
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9319
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3765
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1906
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6324
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

2-179204542-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179204542
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179204542
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 50228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+51C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.987+51C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.894+721C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+51C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.894+721C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.924+51C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+51C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8776
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24635
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4421
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8991
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3775
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10736
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6270
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

2-179208968-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179208968
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179208968
    reference: chr 2
allele count: 1
allele frequency: 8.312966565248474e-6
allele num: 120294
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-45T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4983T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-45T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4983T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4477T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4477T>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4477T>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18511
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10711
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-179208974-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179208974
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179208974
    reference: chr 2
allele count: 19016
allele frequency: 1.580741159454022e-1
allele num: 120298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4483G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4483G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-39G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4483G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4977G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-39G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4977G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.25e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 4.75e1
  variant carriers: 1856
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 473
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 4.25e1
  variant carriers: 2570
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 1.75e1
  variant carriers: 460
genotype depth: GenotypeDepth
  all individuals: 11869
  bin: 3.25e1
  variant carriers: 2638
genotype depth: GenotypeDepth
  all individuals: 14990
  bin: 2.75e1
  variant carriers: 1811
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 462
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.25e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 8378
  bin: 2.25e1
  variant carriers: 989
genotype depth: GenotypeDepth
  all individuals: 7412
  bin: 3.75e1
  variant carriers: 2853
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 5.25e1
  variant carriers: 1281
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 5.75e1
  variant carriers: 792
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.75e1
  variant carriers: 318
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 3.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 17093
  bin: 6.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 8.75e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 4.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 7.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 4.75e1
  variant carriers: 30
num of homozygotes: 1726
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

2-179208974-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179208974
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179208974
    reference: chr 2
allele count: 7417
allele frequency: 6.1655222863223e-2
allele num: 120298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4977G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4483G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4483G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-39G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4483G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4977G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-39G>C
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14990
  bin: 2.75e1
  variant carriers: 879
genotype depth: GenotypeDepth
  all individuals: 11869
  bin: 3.25e1
  variant carriers: 1204
genotype depth: GenotypeDepth
  all individuals: 7412
  bin: 3.75e1
  variant carriers: 1161
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8378
  bin: 2.25e1
  variant carriers: 564
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 1.75e1
  variant carriers: 240
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.75e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 5.25e1
  variant carriers: 402
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 4.75e1
  variant carriers: 657
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 4.25e1
  variant carriers: 973
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 5.75e1
  variant carriers: 257
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5573
  bin: 6.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 5.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 8.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 382
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

2-179208976-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179208976
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179208976
    reference: chr 2
allele count: 1
allele frequency: 8.287613333112331e-6
allele num: 120662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4485C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-37C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4485C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4975C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-37C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4975C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4485C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21071
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9422
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3327
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

2-179208981-GTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179208981
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179208979
    reference: chr 2
allele count: 1
allele frequency: 8.28363154406892e-6
allele num: 120720
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4492_987+4493delTT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-30_988-29delTT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-30_925-29delTT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4968_895-4967delTT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4968_895-4967delTT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4492_987+4493delTT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4492_987+4493delTT
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3223
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9438
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: GTT
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

2-179208987-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179208987
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179208986
    reference: chr 2
allele count: 1
allele frequency: 8.277734549608463e-6
allele num: 120806
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4500delC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4500delC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4500delC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4960delC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4960delC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-22delC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-22delC
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4351
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5915
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: TC
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

2-179208991-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179208991
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179208991
    reference: chr 2
allele count: 1
allele frequency: 8.274994621253496e-6
allele num: 120846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-22C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4500C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4960C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4500C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4500C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4960C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-22C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4352
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9451
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1956
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

2-179208995-TCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179208995
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179208992
    reference: chr 2
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4954_895-4952delTCC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-16_925-14delTCC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-16_988-14delTCC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4506_987+4508delTCC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4506_987+4508delTCC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4506_987+4508delTCC
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4954_895-4952delTCC
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9480
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30072
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: TCTC
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

2-179208996-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179208996
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179208996
    reference: chr 2
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4505C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4505C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4955C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4505C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4955C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-17C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-17C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30096
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5908
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

2-179209001-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209001
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209001
    reference: chr 2
allele count: 1
allele frequency: 8.266922390132602e-6
allele num: 120964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4950A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4510A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4510A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4950A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-12A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-12A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4510A>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3292
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9500
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD

2-179209007-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209007
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209007
    reference: chr 2
allele count: 2
allele frequency: 1.652237129072764e-5
allele num: 121048
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4944C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-6C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-6C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4516C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4944C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4516C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4516C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30460
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3199
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5904
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
hgvs: c.988-6C>T
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

2-179209008-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209008
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209008
    reference: chr 2
allele count: 5
allele frequency: 4.130251614928381e-5
allele num: 121058
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4943G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4517G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4517G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4517G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.925-5G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.988-5G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4943G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3298
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30496
  bin: 6.25e1
  variant carriers: 0
hgvs: c.988-5G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

2-179209023-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209023
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209023
    reference: chr 2
allele count: 1
allele frequency: 8.255320554097116e-6
allele num: 121134
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.998C>G
  hgvsp: ENSP00000376293.2:p.Pro333Arg
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4532C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4928C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.935C>G
  hgvsp: ENSP00000318723.2:p.Pro312Arg
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4532C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4928C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4532C>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9538
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30580
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro333Arg
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

2-179209024-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209024
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209024
    reference: chr 2
allele count: 8
allele frequency: 6.60414740457007e-5
allele num: 121136
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4927C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.936C>T
  hgvsp: ENST00000315022.2:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.999C>T
  hgvsp: ENST00000392505.2:c.999C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4533C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4533C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4533C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4927C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9526
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5908
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro333Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-179209025-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209025
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209025
    reference: chr 2
allele count: 4
allele frequency: 3.301637612255679e-5
allele num: 121152
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.937G>A
  hgvsp: ENSP00000318723.2:p.Ala313Thr
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4534G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4926G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4534G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4534G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1000G>A
  hgvsp: ENSP00000376293.2:p.Ala334Thr
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4926G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3194
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3309
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala334Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

2-179209026-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209026
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209026
    reference: chr 2
allele count: 28
allele frequency: 2.311031875732514e-4
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4535C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4535C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1001C>T
  hgvsp: ENSP00000376293.2:p.Ala334Val
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.938C>T
  hgvsp: ENSP00000318723.2:p.Ala313Val
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4535C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4925C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4925C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10496
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5915
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1348
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3194
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala334Val
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

2-179209027-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209027
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209027
    reference: chr 2
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1002G>A
  hgvsp: ENST00000392505.2:c.1002G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4924G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.939G>A
  hgvsp: ENST00000315022.2:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4536G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4536G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4536G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4924G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3194
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3307
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala334Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

2-179209033-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209033
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209033
    reference: chr 2
allele count: 6
allele frequency: 4.95074013565028e-5
allele num: 121194
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1008C>T
  hgvsp: ENST00000392505.2:c.1008C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4542C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4918C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.945C>T
  hgvsp: ENST00000315022.2:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4918C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4542C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4542C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9532
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly336Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/2-179209034-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209034
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209034
    reference: chr 2
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4543C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4917C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4917C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.946C>A
  hgvsp: ENSP00000318723.2:p.Gln316Lys
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4543C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1009C>A
  hgvsp: ENSP00000376293.2:p.Gln337Lys
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4543C>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30792
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3193
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln337Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-179209045-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209045
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209045
    reference: chr 2
allele count: 4
allele frequency: 3.300493423766853e-5
allele num: 121194
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.957A>C
  hgvsp: ENST00000315022.2:c.957A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4906A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4554A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1020A>C
  hgvsp: ENST00000392505.2:c.1020A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4554A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4906A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4554A>C
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30706
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr340Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

2-179209049-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209049
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209049
    reference: chr 2
allele count: 16
allele frequency: 1.320328101533231e-4
allele num: 121182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4902C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1024C>G
  hgvsp: ENSP00000376293.2:p.Arg342Gly
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.961C>G
  hgvsp: ENSP00000318723.2:p.Arg321Gly
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4558C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4558C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4902C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4558C>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6106
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10435
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3297
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg342Gly
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

2-179209049-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209049
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209049
    reference: chr 2
allele count: 7
allele frequency: 5.776435444207885e-5
allele num: 121182
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1024C>T
  hgvsp: ENSP00000376293.2:p.Arg342Trp
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4558C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4902C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4558C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4902C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4558C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.961C>T
  hgvsp: ENSP00000318723.2:p.Arg321Trp
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9485
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4346
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg342Trp
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

2-179209050-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209050
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209050
    reference: chr 2
allele count: 2
allele frequency: 1.650437365901964e-5
allele num: 121180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4559G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4559G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4559G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4901G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1025G>A
  hgvsp: ENSP00000376293.2:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.962G>A
  hgvsp: ENSP00000318723.2:p.Arg321Gln
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4901G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3298
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3188
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg342Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

2-179209053-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209053
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209053
    reference: chr 2
allele count: 3
allele frequency: 2.475982965237199e-5
allele num: 121164
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4898G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4898G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4562G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1028G>A
  hgvsp: ENSP00000376293.2:p.Arg343His
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.965G>A
  hgvsp: ENSP00000318723.2:p.Arg322His
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4562G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4562G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg343His
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

2-179209055-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209055
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209055
    reference: chr 2
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4564C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4564C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.967C>T
  hgvsp: ENSP00000318723.2:p.Arg323Trp
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4564C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4896C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4896C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1030C>T
  hgvsp: ENSP00000376293.2:p.Arg344Trp
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6075
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30494
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3185
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg344Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-179209056-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209056
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209056
    reference: chr 2
allele count: 8
allele frequency: 6.603166218201627e-5
allele num: 121154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.968G>A
  hgvsp: ENSP00000318723.2:p.Arg323Gln
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1031G>A
  hgvsp: ENSP00000376293.2:p.Arg344Gln
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4895G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4895G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4565G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4565G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4565G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3182
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg344Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

2-179209059-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209059
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209059
    reference: chr 2
allele count: 1
allele frequency: 8.25722920416825e-6
allele num: 121106
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4892A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4568A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4568A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1034A>G
  hgvsp: ENSP00000376293.2:p.Gln345Arg
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4892A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4568A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.971A>G
  hgvsp: ENSP00000318723.2:p.Gln324Arg
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9350
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30270
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln345Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

2-179209067-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209067
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209067
    reference: chr 2
allele count: 1
allele frequency: 8.260912665631299e-6
allele num: 121052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4884G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4576G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4576G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4884G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.979G>A
  hgvsp: ENSP00000318723.2:p.Ala327Thr
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4576G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1042G>A
  hgvsp: ENSP00000376293.2:p.Ala348Thr
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30074
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3160
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala348Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

2-179209068-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209068
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209068
    reference: chr 2
allele count: 25
allele frequency: 2.065637703671878e-4
allele num: 121028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4577C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4883C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4577C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4883C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.980C>T
  hgvsp: ENSP00000318723.2:p.Ala327Val
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1043C>T
  hgvsp: ENSP00000376293.2:p.Ala348Val
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4577C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10339
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5868
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 30050
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala348Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

2-179209069-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209069
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209069
    reference: chr 2
allele count: 1
allele frequency: 8.261868173631421e-6
allele num: 121038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4578G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.981G>A
  hgvsp: ENST00000315022.2:c.981G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4578G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1044G>A
  hgvsp: ENST00000392505.2:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4578G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4882G>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4882G>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5847
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9233
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala348Ala
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

2-179209082-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209082
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209082
    reference: chr 2
allele count: 1
allele frequency: 8.267059076404159e-6
allele num: 120962
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4591A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4869A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1057A>G
  hgvsp: ENSP00000376293.2:p.Thr353Ala
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.994A>G
  hgvsp: ENSP00000318723.2:p.Thr332Ala
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4591A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4869A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4591A>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4280
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr353Ala
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/2-179209085-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209085
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209085
    reference: chr 2
allele count: 6
allele frequency: 4.959825414145422e-5
allele num: 120972
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4866A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.997A>C
  hgvsp: ENSP00000318723.2:p.Thr333Pro
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4866A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4594A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4594A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4594A>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1060A>C
  hgvsp: ENSP00000376293.2:p.Thr354Pro
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22010
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3165
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30334
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5871
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 4293
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr354Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-179209085-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209085
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209085
    reference: chr 2
allele count: 1
allele frequency: 8.266375690242371e-6
allele num: 120972
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4866A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.997A>G
  hgvsp: ENSP00000318723.2:p.Thr333Ala
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4594A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1060A>G
  hgvsp: ENSP00000376293.2:p.Thr354Ala
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4594A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4866A>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4594A>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5871
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3219
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr354Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

2-179209093-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209093
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209093
    reference: chr 2
allele count: 1
allele frequency: 8.275953389830508e-6
allele num: 120832
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.999+6T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4602T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1062+6T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4858T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4602T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4602T>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4858T>C
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21992
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3157
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30099
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1062+6T>C
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

2-179209100-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209100
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209100
    reference: chr 2
allele count: 4
allele frequency: 3.314221323699997e-5
allele num: 120692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.999+13C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1062+13C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4609C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4609C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4851C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4609C>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4851C>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5855
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-179209101-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209101
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209101
    reference: chr 2
allele count: 1
allele frequency: 8.282808203293245e-6
allele num: 120732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4850A>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4610A>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4610A>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4610A>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.999+14A>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4850A>T
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1062+14A>T
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9988
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29731
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9164
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: A
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

2-179209106-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209106
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209106
    reference: chr 2
allele count: 5
allele frequency: 4.143669302040343e-5
allele num: 120666
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.999+19C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4615C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4615C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1062+19C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4615C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4845C>G
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4845C>G
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21644
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3152
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5850
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-179209115-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209115
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209116
    reference: chr 2
allele count: 2
allele frequency: 1.659200265472042e-5
allele num: 120540
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.999+31dupT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1062+31dupT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4627dupT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4627dupT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4627dupT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4833dupT
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4833dupT
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13694
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4174
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

2-179209124-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179209124
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179209124
    reference: chr 2
allele count: 1
allele frequency: 8.311999202048076e-6
allele num: 120308
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.987+4633G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-4827G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.987+4633G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.999+37G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-4827G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.987+4633G>C
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1062+37G>C
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12750
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1925
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3099
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5840
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2998
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8123
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/2-179213914-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179213914
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 179213914
    reference: chr 2
allele count: 9
allele frequency: 7.414608426290554e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000386885
  ensembl transcript: ENST00000409631
  gene symbol: OSBPL6
  hgvsc: ENST00000409631.1:c.988-37C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000190611
  ensembl transcript: ENST00000190611
  gene symbol: OSBPL6
  hgvsc: ENST00000190611.4:c.988-37C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000387248
  ensembl transcript: ENST00000409045
  gene symbol: OSBPL6
  hgvsc: ENST00000409045.3:c.895-37C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000318723
  ensembl transcript: ENST00000315022
  gene symbol: OSBPL6
  hgvsc: ENST00000315022.2:c.1000-37C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000376293
  ensembl transcript: ENST00000392505
  gene symbol: OSBPL6
  hgvsc: ENST00000392505.2:c.1063-37C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000352713
  ensembl transcript: ENST00000359685
  gene symbol: OSBPL6
  hgvsc: ENST00000359685.3:c.988-37C>A
  variant of: http://identifiers.org/hgnc/16388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000079156
  ensembl protein: ENSP00000349591
  ensembl transcript: ENST00000357080
  gene symbol: OSBPL6
  hgvsc: ENST00000357080.4:c.895-37C>A
  variant of: http://identifiers.org/hgnc/16388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 4637
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3464
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.192338387869114e-5
allele num: 62650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

QD
type: SiteQuality
SIO_000300: 1.319e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.802e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.410951e6

MQRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

GenotypeQuality
all individuals: 971
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4555
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3229
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 674
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9374
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.248751248751249e-4
allele num: 8008
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 1.345645e6

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.44e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

QD
type: SiteQuality
SIO_000300: 1.643e1

GenotypeQuality
all individuals: 644
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8097
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3228
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3359
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2335
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12274
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.62887672660933e-5
allele num: 61392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7872
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

VQSLOD
type: SiteQuality
SIO_000300: -2.405e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.282069e6

QD
type: SiteQuality
SIO_000300: 1.666e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

MQRankSum
type: SiteQuality
SIO_000300: -1.61e-1

GenotypeQuality
all individuals: 3116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1339
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8824
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4658
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7498
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5399
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.126802925695536e-5
allele num: 58516
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

QD
type: SiteQuality
SIO_000300: 2.988e1

DP
type: SiteQuality
SIO_000300: 1.230577e6

GenotypeQuality
all individuals: 3228
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5407
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.40866482598766e-5
allele num: 58674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10634
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

DP
type: SiteQuality
SIO_000300: 1.228647e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.278e1

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.329e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 5001
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6819
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.890788080471941e-5
allele num: 52888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6054
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.122777e6

VQSLOD
type: SiteQuality
SIO_000300: -2.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 5.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.267e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.467e0

MQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

GenotypeQuality
all individuals: 219
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7876
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3140
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6108
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.045150501672241e-4
allele num: 9568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.18e-1

QD
type: SiteQuality
SIO_000300: 8.369999999999999e0

DP
type: SiteQuality
SIO_000300: 1.176903e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

FS
type: SiteQuality
SIO_000300: 6.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
all individuals: 3140
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 588
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11558
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2212
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.481042654028436e-4
allele num: 6752
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6102
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

QD
type: SiteQuality
SIO_000300: 1.205e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

FS
type: SiteQuality
SIO_000300: 3.711e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

DP
type: SiteQuality
SIO_000300: 1.184046e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5092
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
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variant carriers: 0

GenotypeQuality
all individuals: 1623
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3143
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.698088088458267e-5
allele num: 54082
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.088e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 1.214029e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 208
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3591
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11430
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 2.318168646769053e-3
allele num: 6902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.97e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.264872e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

GenotypeQuality
all individuals: 518
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4676
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29689
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1938
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 3.009027081243731e-4
allele num: 9970
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11032
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7066
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.36e-1

FS
type: SiteQuality
SIO_000300: 3.933e0

DP
type: SiteQuality
SIO_000300: 1.309239e6

QD
type: SiteQuality
SIO_000300: 9.44e0

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

GenotypeQuality
all individuals: 34474
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2195
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 9.75e1
variant carriers: 77

GenotypeQuality
all individuals: 1673
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2455
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.874244492103724e-4
allele num: 10258
num of homozygotes: 0

African
type: Population
allele count: 71
allele frequency: 7.636050763605076e-3
allele num: 9298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.255781359495445e-5
allele num: 57080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7362
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

FS
type: SiteQuality
SIO_000300: 6.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.364897e6

VQSLOD
type: SiteQuality
SIO_000300: 4.26e0

QD
type: SiteQuality
SIO_000300: 1.468e1

GenotypeQuality
all individuals: 275
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
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variant carriers: 0

GenotypeQuality
all individuals: 3137
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 223
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.626439398867998e-5
allele num: 61484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8148
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10994
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.4e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-1

InbreedingCoeff
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SIO_000300: 2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 1.498999e6

QD
type: SiteQuality
SIO_000300: 1.109e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9950
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11114
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8278
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 14758
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.597495127639861e-5
allele num: 62598
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.525862e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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InbreedingCoeff
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MQ
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SIO_000300: 6.0e1

MQRankSum
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
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SIO_000300: 5.22e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63430
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11242
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.193317422434368e-4
allele num: 8380
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15356
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

DP
type: SiteQuality
SIO_000300: 1.55019e6

MQRankSum
type: SiteQuality
SIO_000300: -2.262e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.587e0

VQSLOD
type: SiteQuality
SIO_000300: -1.898e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.94431185361973e-5
allele num: 10056
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.507874528179097e-5
allele num: 15366
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.57743635044326e-5
allele num: 63394
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.55336e6

MQ
type: SiteQuality
SIO_000300: 5.984e1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

QD
type: SiteQuality
SIO_000300: 1.108e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 26

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.681641795753541e-4
allele num: 63394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 8.004268943436499e-4
allele num: 11244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.108e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

DP
type: SiteQuality
SIO_000300: 1.55336e6

MQ
type: SiteQuality
SIO_000300: 5.984e1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.154972236244321e-5
allele num: 63392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15370
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.465e0

DP
type: SiteQuality
SIO_000300: 1.553145e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

MQ
type: SiteQuality
SIO_000300: 5.939e1

QD
type: SiteQuality
SIO_000300: 1.016e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.03e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.154972236244321e-4
allele num: 63392
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.942334460131238e-5
allele num: 10058
num of homozygotes: 0

Other
type: Population
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East Asian
type: Population
allele count: 1
allele frequency: 1.193887297039159e-4
allele num: 8376
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15370
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MQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

MQ
type: SiteQuality
SIO_000300: 5.939e1

QD
type: SiteQuality
SIO_000300: 1.016e1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

FS
type: SiteQuality
SIO_000300: 2.465e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.03e-1

DP
type: SiteQuality
SIO_000300: 1.553145e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.577486118122161e-5
allele num: 63392
num of homozygotes: 0

South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8376
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6520
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Other
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BaseQRankSum
type: SiteQuality
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FS
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MQ
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.577685220244857e-5
allele num: 63384
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African
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allele count: 10
allele frequency: 9.938382031405286e-4
allele num: 10062
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European (Finnish)
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Latino
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East Asian
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South Asian
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Other
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BaseQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
type: SiteQuality
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MQRankSum
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QD
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MQ
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ReadPosRankSum
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VQSLOD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
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Other
type: Population
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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East Asian
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Latino
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VQSLOD
type: SiteQuality
SIO_000300: -1.931e-1

MQ
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

DP
type: SiteQuality
SIO_000300: 1.538391e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.628e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.0e-1

GenotypeQuality
all individuals: 104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3131
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 203
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.608544588856003e-5
allele num: 62168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9876
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

FS
type: SiteQuality
SIO_000300: 4.882e0

QD
type: SiteQuality
SIO_000300: 1.522e1

DP
type: SiteQuality
SIO_000300: 1.526038e6

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 176
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
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GenotypeQuality
all individuals: 704
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3131
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.112447603426281e-5
allele num: 10974
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.484482e6

MQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.341e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.833e0

QD
type: SiteQuality
SIO_000300: 6.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.28e-1

GenotypeQuality
all individuals: 185
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3129
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2516
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19822
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8368
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.039717196922437e-4
allele num: 9618
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.2e-1

MQ
type: SiteQuality
SIO_000300: 3.55e1

VQSLOD
type: SiteQuality
SIO_000300: -3.646e0

MQRankSum
type: SiteQuality
SIO_000300: -5.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.78e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

DP
type: SiteQuality
SIO_000300: 1.209686e6

GenotypeQuality
all individuals: 110
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4000
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3129
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29582
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5344
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.345794392523364e-5
allele num: 10700
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.186239620403321e-4
allele num: 8430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

QD
type: SiteQuality
SIO_000300: 1.369e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.08e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.624e0

FS
type: SiteQuality
SIO_000300: 1.9295e1

DP
type: SiteQuality
SIO_000300: 1.039001e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 303
bin: 4.75e1
variant carriers: 88

GenotypeQuality
all individuals: 377
bin: 7.75e1
variant carriers: 105

GenotypeQuality
all individuals: 705
bin: 6.75e1
variant carriers: 51

GenotypeQuality
all individuals: 3930
bin: 3.25e1
variant carriers: 74

GenotypeQuality
all individuals: 287
bin: 7.25e1
variant carriers: 76

GenotypeQuality
all individuals: 1512
bin: 3.75e1
variant carriers: 93

GenotypeQuality
all individuals: 349
bin: 8.25e1
variant carriers: 156

GenotypeQuality
all individuals: 4071
bin: 6.25e1
variant carriers: 40

GenotypeQuality
all individuals: 294
bin: 9.25e1
variant carriers: 97

GenotypeQuality
all individuals: 185
bin: 8.75e1
variant carriers: 91

African
type: Population
allele count: 42
allele frequency: 6.205673758865249e-3
allele num: 6768
num of homozygotes: 1

South Asian
type: Population
allele count: 184
allele frequency: 1.955366631243358e-2
allele num: 9410
num of homozygotes: 7

East Asian
type: Population
allele count: 1449
allele frequency: 3.021267723102585e-1
allele num: 4796
num of homozygotes: 175

European (Non-Finnish)
type: Population
allele count: 632
allele frequency: 1.617195496417605e-2
allele num: 39080
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 39
allele frequency: 7.692307692307693e-3
allele num: 5070
num of homozygotes: 0

Latino
type: Population
allele count: 1680
allele frequency: 2.276422764227642e-1
allele num: 7380
num of homozygotes: 148

Other
type: Population
allele count: 21
allele frequency: 3.354632587859425e-2
allele num: 626
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.06e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.99e0

QD
type: SiteQuality
SIO_000300: 1.607e1

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

DP
type: SiteQuality
SIO_000300: 9.52862e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4211
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1624
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variant carriers: 0

GenotypeQuality
all individuals: 7783
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variant carriers: 0

GenotypeQuality
all individuals: 28773
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variant carriers: 0

GenotypeQuality
all individuals: 211
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GenotypeQuality
all individuals: 3084
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3950
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.231767290990897e-5
allele num: 38228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5026
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.681e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 6.06e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.69e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.032e0

DP
type: SiteQuality
SIO_000300: 9.17729e5

GenotypeQuality
all individuals: 24090
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
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variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10319
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 199
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GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 4395
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variant carriers: 0

GenotypeQuality
all individuals: 4054
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4672
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.354579000335458e-4
allele num: 5962
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8138
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

DP
type: SiteQuality
SIO_000300: 8.57836e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.07e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 1.12e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

FS
type: SiteQuality
SIO_000300: 6.682e0

GenotypeQuality
all individuals: 5603
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11166
bin: 7.5e0
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GenotypeQuality
all individuals: 95
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GenotypeQuality
all individuals: 3083
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 193
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
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variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.362026695723236e-4
allele num: 7342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29912
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.34e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.191e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

QD
type: SiteQuality
SIO_000300: 1.041e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.28264e5

MQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQ
type: SiteQuality
SIO_000300: 5.435e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.268e0

GenotypeQuality
all individuals: 563
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3083
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2170
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
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variant carriers: 0

GenotypeQuality
all individuals: 10637
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 4.757373929590866e-4
allele num: 4204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27356
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.54e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

QD
type: SiteQuality
SIO_000300: 1.578e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.418e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 8.21247e5

GenotypeQuality
all individuals: 258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 6.75e1
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GenotypeQuality
all individuals: 3080
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 4.75e1
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GenotypeQuality
all individuals: 1860
bin: 2.5e0
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GenotypeQuality
all individuals: 14371
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4210
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.54e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

VQSLOD
type: SiteQuality
SIO_000300: -4.722e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.445e1

DP
type: SiteQuality
SIO_000300: 8.21338e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.22e-1

GenotypeQuality
all individuals: 1065
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7858
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4825
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1926
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2712
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3867
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.721952167995334e-5
allele num: 10286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 3.712e0

DP
type: SiteQuality
SIO_000300: 1.922026e6

VQSLOD
type: SiteQuality
SIO_000300: -2.157e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

QD
type: SiteQuality
SIO_000300: 2.156e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.021e0

GenotypeQuality
all individuals: 300
bin: 5.25e1
variant carriers: 45

GenotypeQuality
all individuals: 247
bin: 5.75e1
variant carriers: 30

GenotypeQuality
all individuals: 462
bin: 2.25e1
variant carriers: 10

GenotypeQuality
all individuals: 93
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 1280
bin: 9.25e1
variant carriers: 107

GenotypeQuality
all individuals: 25966
bin: 9.75e1
variant carriers: 16663

GenotypeQuality
all individuals: 5573
bin: 6.75e1
variant carriers: 60

GenotypeQuality
all individuals: 2624
bin: 7.75e1
variant carriers: 69

GenotypeQuality
all individuals: 2010
bin: 8.25e1
variant carriers: 92

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 9

European (Finnish)
type: Population
allele count: 829
allele frequency: 1.305511811023622e-1
allele num: 6350
num of homozygotes: 51

African
type: Population
allele count: 1373
allele frequency: 1.332492236024845e-1
allele num: 10304
num of homozygotes: 90

Other
type: Population
allele count: 121
allele frequency: 1.378132118451025e-1
allele num: 878
num of homozygotes: 6

East Asian
type: Population
allele count: 5
allele frequency: 5.803156917363045e-4
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 3330
allele frequency: 2.901202300052274e-1
allele num: 11478
num of homozygotes: 488

European (Non-Finnish)
type: Population
allele count: 11084
allele frequency: 1.673764005919483e-1
allele num: 66222
num of homozygotes: 915

South Asian
type: Population
allele count: 2274
allele frequency: 1.382370820668693e-1
allele num: 16450
num of homozygotes: 176

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.98e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.88e-1

DP
type: SiteQuality
SIO_000300: 2.11373e6

QD
type: SiteQuality
SIO_000300: 1.666e1

VQSLOD
type: SiteQuality
SIO_000300: 6.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.468e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 93
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 418
bin: 4.75e1
variant carriers: 8

GenotypeQuality
all individuals: 17093
bin: 6.25e1
variant carriers: 13

GenotypeQuality
all individuals: 2624
bin: 7.75e1
variant carriers: 29

GenotypeQuality
all individuals: 905
bin: 8.75e1
variant carriers: 16

GenotypeQuality
all individuals: 25966
bin: 9.75e1
variant carriers: 6857

GenotypeQuality
all individuals: 2028
bin: 7.25e1
variant carriers: 11

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1280
bin: 9.25e1
variant carriers: 26

Latino
type: Population
allele count: 446
allele frequency: 3.885694371841784e-2
allele num: 11478
num of homozygotes: 16

European (Finnish)
type: Population
allele count: 227
allele frequency: 3.574803149606299e-2
allele num: 6350
num of homozygotes: 2

East Asian
type: Population
allele count: 292
allele frequency: 3.389043639740019e-2
allele num: 8616
num of homozygotes: 4

European (Non-Finnish)
type: Population
allele count: 3303
allele frequency: 4.987768415330253e-2
allele num: 66222
num of homozygotes: 109

South Asian
type: Population
allele count: 2551
allele frequency: 1.550759878419453e-1
allele num: 16450
num of homozygotes: 227

African
type: Population
allele count: 531
allele frequency: 5.15333850931677e-2
allele num: 10304
num of homozygotes: 21

Other
type: Population
allele count: 67
allele frequency: 7.630979498861047e-2
allele num: 878
num of homozygotes: 3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.468e-1

QD
type: SiteQuality
SIO_000300: 1.666e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: 6.63e0

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.78e-1

DP
type: SiteQuality
SIO_000300: 2.11373e6

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27875
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4408
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5929
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3271
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504936190705514e-5
allele num: 66448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.071e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

FS
type: SiteQuality
SIO_000300: 2.305e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

DP
type: SiteQuality
SIO_000300: 1.8599e6

GenotypeQuality
all individuals: 4368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29018
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5919
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504392827055001e-5
allele num: 66472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.864724e6

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

QD
type: SiteQuality
SIO_000300: 1.716e1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1965
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9470
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3301
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29293
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3211
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.193e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

DP
type: SiteQuality
SIO_000300: 1.867944e6

MQ
type: SiteQuality
SIO_000300: 5.937e1

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5914
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 147
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3199
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29810
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503216884132043e-5
allele num: 66524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.695e1

MQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.117e0

DP
type: SiteQuality
SIO_000300: 1.871072e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.41e-1

FS
type: SiteQuality
SIO_000300: 4.75e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e-1

GenotypeQuality
all individuals: 133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5909
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 339
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4344
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.79e-1

DP
type: SiteQuality
SIO_000300: 1.8729e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.731e1

FS
type: SiteQuality
SIO_000300: 1.085e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.226e0

MQ
type: SiteQuality
SIO_000300: 5.614e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.36e-1

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9488
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3299
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1957
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4346
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

FS
type: SiteQuality
SIO_000300: 1.2401e1

DP
type: SiteQuality
SIO_000300: 1.873365e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.573e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.656e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.366e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.25e-1

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4351
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.688044952528579e-5
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.619e0

DP
type: SiteQuality
SIO_000300: 1.87508e6

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

FS
type: SiteQuality
SIO_000300: 9.95e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: -1.145e0

QD
type: SiteQuality
SIO_000300: 1.1e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.676795045480937e-5
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.771e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.307e0

QD
type: SiteQuality
SIO_000300: 1.26e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.982e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.877358e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817520901490367e-4
allele num: 16506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

FS
type: SiteQuality
SIO_000300: 3.092e0

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

DP
type: SiteQuality
SIO_000300: 1.877773e6

QD
type: SiteQuality
SIO_000300: 1.128e1

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1954
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1349
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GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 2.997e0

DP
type: SiteQuality
SIO_000300: 1.880162e6

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.09e-1

QD
type: SiteQuality
SIO_000300: 8.85e0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 3304
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 65
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GenotypeQuality
all individuals: 4352
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.050294082343056e-4
allele num: 66648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

QD
type: SiteQuality
SIO_000300: 1.692e1

DP
type: SiteQuality
SIO_000300: 1.880774e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 1.874e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 32
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5906
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4347
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.623208506703652e-4
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.880674e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e-1

QD
type: SiteQuality
SIO_000300: 8.76e0

MQRankSum
type: SiteQuality
SIO_000300: 5.08e-1

FS
type: SiteQuality
SIO_000300: 4.441e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 13
allele frequency: 7.875923906458257e-4
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.950136509555669e-4
allele num: 66662
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.237136465324385e-3
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

DP
type: SiteQuality
SIO_000300: 1.881825e6

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.191e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.288e0

QD
type: SiteQuality
SIO_000300: 1.083e1

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1953
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.109e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 8.43e-1

QD
type: SiteQuality
SIO_000300: 1.017e1

VQSLOD
type: SiteQuality
SIO_000300: 3.12e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-2

DP
type: SiteQuality
SIO_000300: 1.880721e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 25
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.999280057595392e-5
allele num: 66672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.098e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.17e-1

DP
type: SiteQuality
SIO_000300: 1.881568e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-2

QD
type: SiteQuality
SIO_000300: 1.11e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 1953
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-3

QD
type: SiteQuality
SIO_000300: 1.375e1

DP
type: SiteQuality
SIO_000300: 1.881139e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

FS
type: SiteQuality
SIO_000300: 7.742e0

VQSLOD
type: SiteQuality
SIO_000300: 5.99e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.000600060006001e-5
allele num: 66660
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.099e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

DP
type: SiteQuality
SIO_000300: 1.880135e6

FS
type: SiteQuality
SIO_000300: 1.099e0

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

African
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allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 2.594258042199931e-4
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
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allele count: 13
allele frequency: 1.950604687453111e-4
allele num: 66646
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

InbreedingCoeff
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SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.88e-1

FS
type: SiteQuality
SIO_000300: 5.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.95e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 1.879651e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.197e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.05032560093629e-4
allele num: 66646
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
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FS
type: SiteQuality
SIO_000300: 5.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.88e-1

QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.95e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

DP
type: SiteQuality
SIO_000300: 1.879651e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
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South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

FS
type: SiteQuality
SIO_000300: 5.42e-1

QD
type: SiteQuality
SIO_000300: 1.196e1

MQ
type: SiteQuality
SIO_000300: 5.839e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.254e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.41e-1

DP
type: SiteQuality
SIO_000300: 1.877878e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.0016509079994e-5
allele num: 66630
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
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Other
type: Population
allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.098e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 3.251e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

DP
type: SiteQuality
SIO_000300: 1.876657e6

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

QD
type: SiteQuality
SIO_000300: 1.292e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.899e1

FS
type: SiteQuality
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ClippingRankSum
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QD
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MQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele count: 4
allele frequency: 6.004022695205788e-5
allele num: 66622
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Latino
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allele frequency: 1.729804532087874e-4
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African
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allele frequency: 1.933861922258751e-4
allele num: 10342
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Other
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allele frequency: 0.0e0
allele num: 900
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6564
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African
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East Asian
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South Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.501681883709755e-5
allele num: 66592
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Other
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ClippingRankSum
type: SiteQuality
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QD
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InbreedingCoeff
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VQSLOD
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FS
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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allele num: 66562
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South Asian
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Other
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East Asian
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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FS
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.45615195047184e-4
allele num: 66548
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731601731601732e-4
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.91e-1

FS
type: SiteQuality
SIO_000300: 3.475e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.161e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

DP
type: SiteQuality
SIO_000300: 1.869153e6

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1337
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4282
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
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variant carriers: 0

GenotypeQuality
all individuals: 30053
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66554
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.189e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.18e-1

DP
type: SiteQuality
SIO_000300: 1.866715e6

MQRankSum
type: SiteQuality
SIO_000300: 7.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.84e-1

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3227
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 30354
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9231
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variant carriers: 0

GenotypeQuality
all individuals: 1931
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variant carriers: 0

GenotypeQuality
all individuals: 5850
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.891e-1

QD
type: SiteQuality
SIO_000300: 1.526e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 1.863835e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 9.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.62e0

GenotypeQuality
all individuals: 143
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1940
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 9249
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1351
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.51698839376992e-5
allele num: 66516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

QD
type: SiteQuality
SIO_000300: 1.337e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

DP
type: SiteQuality
SIO_000300: 1.863314e6

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-2

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4293
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30334
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variant carriers: 0

GenotypeQuality
all individuals: 1351
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9249
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66516
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.863314e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

QD
type: SiteQuality
SIO_000300: 1.337e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5859
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variant carriers: 1

GenotypeQuality
all individuals: 192
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variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 9199
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variant carriers: 0

GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 3193
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504392827055001e-5
allele num: 66472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.019e0

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.24e-1

DP
type: SiteQuality
SIO_000300: 1.860043e6

QD
type: SiteQuality
SIO_000300: 1.246e1

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3169
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 3150
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GenotypeQuality
all individuals: 29803
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.427479062993082e-4
allele num: 16478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.731e-1

DP
type: SiteQuality
SIO_000300: 1.855661e6

FS
type: SiteQuality
SIO_000300: 9.305e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.05e-1

QD
type: SiteQuality
SIO_000300: 9.220000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.726e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
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variant carriers: 0

GenotypeQuality
all individuals: 3170
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variant carriers: 0

GenotypeQuality
all individuals: 74
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GenotypeQuality
all individuals: 1934
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 1340
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 5853
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4244
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505888022166672e-5
allele num: 66406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0486e1

QD
type: SiteQuality
SIO_000300: 1.383e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 1.854129e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.669e0

VQSLOD
type: SiteQuality
SIO_000300: -1.189e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 28
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1931
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.469812630117973e-4
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507113576079093e-5
allele num: 66352
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.478e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.191e0

VQSLOD
type: SiteQuality
SIO_000300: 6.08e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.49e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016955288722621e-5
allele num: 66292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.82e1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.78e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.824083e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4106
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GenotypeQuality
all individuals: 64
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 312
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GenotypeQuality
all individuals: 1327
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variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23145
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.77e-1

DP
type: SiteQuality
SIO_000300: 1.776579e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.007e-1

QD
type: SiteQuality
SIO_000300: 1.352e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.95e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1