3-49051946-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051946
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051946
    reference: chr 3
allele count: 13
allele frequency: 1.071740671734076e-4
allele num: 121298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.261+14G>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2790+14G>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2788+14G>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2873+14G>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2783+14G>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.506+14G>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2905+14G>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1127+14G>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2630+14G>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5529
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11069
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3191
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

3-49051967-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051967
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051967
    reference: chr 3
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2873+35G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1127+35G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.261+35G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2783+35G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.506+35G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2790+35G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2788+35G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2905+35G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2630+35G>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5120
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD

3-49051967-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051967
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051967
    reference: chr 3
allele count: 4
allele frequency: 3.298805832288711e-5
allele num: 121256
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2788+35G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.506+35G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2873+35G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2630+35G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2905+35G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1127+35G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2783+35G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.261+35G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2790+35G>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5438
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26877
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

3-49051971-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051971
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051972
    reference: chr 3
allele count: 8
allele frequency: 6.599571027883188e-5
allele num: 121220
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2630+45dupG
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2788+45dupG
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1127+45dupG
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2783+45dupG
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2905+45dupG
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.506+45dupG
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2873+45dupG
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.261+45dupG
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2790+45dupG
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13202
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13515
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21106
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5116
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10993
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5435
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/3-49051980-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051980
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051980
    reference: chr 3
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2630+48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.506+48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2873+48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2790+48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2788+48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2905+48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.261+48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2783+48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1127+48C>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

3-49051981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051981
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051981
    reference: chr 3
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2783+49C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1127+49C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.506+49C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2905+49C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2788+49C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2873+49C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.261+49C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2630+49C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2790+49C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

3-49051983-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051983
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051983
    reference: chr 3
allele count: 2
allele frequency: 1.649647800194658e-5
allele num: 121238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789-50G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906-50G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874-50G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631-50G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784-50G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262-50G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128-50G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507-50G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791-50G>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5439
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5039
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

3-49051984-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051984
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051984
    reference: chr 3
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874-49T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789-49T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507-49T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791-49T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784-49T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631-49T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906-49T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262-49T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128-49T>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13505
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5121
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3192
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5040
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

3-49051989-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051989
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051989
    reference: chr 3
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128-44C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631-44C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784-44C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874-44C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262-44C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789-44C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906-44C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791-44C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507-44C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5439
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26759
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

3-49051992-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051992
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051992
    reference: chr 3
allele count: 3
allele frequency: 2.474675817467912e-5
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789-41C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874-41C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791-41C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906-41C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784-41C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507-41C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631-41C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128-41C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262-41C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

3-49051993-ATC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051993
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051991
    reference: chr 3
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631-36_2631-35delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784-36_2784-35delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906-36_2906-35delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262-36_262-35delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874-36_2874-35delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791-36_*2791-35delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789-36_*2789-35delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507-36_507-35delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128-36_1128-35delCT
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5116
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: ATC
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

3-49051998-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49051998
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49051998
    reference: chr 3
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784-35T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507-35T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789-35T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631-35T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262-35T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791-35T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128-35T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906-35T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874-35T>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

3-49052002-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052002
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052002
    reference: chr 3
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791-31A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874-31A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507-31A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906-31A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631-31A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789-31A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128-31A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784-31A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262-31A>G
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20995
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5433
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-49052008-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052008
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052008
    reference: chr 3
allele count: 2
allele frequency: 1.650628063978344e-5
allele num: 121166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631-25C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791-25C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128-25C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262-25C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874-25C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789-25C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507-25C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784-25C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906-25C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26490
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5118
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

3-49052013-TGTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052013
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052010
    reference: chr 3
allele count: 1397
allele frequency: 1.152545169540467e-2
allele num: 121210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631-19_2631-17delGTC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789-19_*2789-17delGTC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906-19_2906-17delGTC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874-19_2874-17delGTC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784-19_2784-17delGTC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262-19_262-17delGTC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507-19_507-17delGTC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128-19_1128-17delGTC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791-19_*2791-17delGTC
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 9.75e1
  variant carriers: 727
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 13189
  bin: 3.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 20632
  bin: 2.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 12843
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 4.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 5420
  bin: 3.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 11
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: TGTC
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum

3-49052031-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052031
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052031
    reference: chr 3
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874-2A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791-2A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631-2A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906-2A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784-2A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789-2A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507-2A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262-2A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128-2A>G
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.25e1
  variant carriers: 0
hgvs: c.2874-2A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

3-49052033-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052033
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052033
    reference: chr 3
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2906G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2789G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2631G>A
  hgvsp: ENST00000448293.1:c.2631G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2874G>A
  hgvsp: ENST00000395474.3:c.2874G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.507G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2791G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1128G>A
  hgvsp: ENST00000415265.2:c.1128G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.262G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2784G>A
  hgvsp: ENST00000608424.1:c.2784G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26498
  bin: 6.25e1
  variant carriers: 0
hgvs: c.2874G>A
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

3-49052036-GCTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052036
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052033
    reference: chr 3
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2640_2642delCCT
  hgvsp: ENSP00000413432.1:p.Leu881del
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.516_518delCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1137_1139delCCT
  hgvsp: ENSP00000412195.2:p.Leu380del
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2800_*2802delCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2915_2917delCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2883_2885delCCT
  hgvsp: ENSP00000378857.3:p.Leu962del
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2798_*2800delCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2793_2795delCCT
  hgvsp: ENSP00000477389.1:p.Leu932del
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.271_273delCCT
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26541
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu962del
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: GCTC
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

3-49052039-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052039
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052039
    reference: chr 3
allele count: 12
allele frequency: 9.896907216494845e-5
allele num: 121250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2795C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.268C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1134C>T
  hgvsp: ENST00000415265.2:c.1134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2912C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2637C>T
  hgvsp: ENST00000448293.1:c.2637C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.513C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2797C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2790C>T
  hgvsp: ENST00000608424.1:c.2790C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2880C>T
  hgvsp: ENST00000395474.3:c.2880C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu960Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

3-49052050-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052050
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052050
    reference: chr 3
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2648G>A
  hgvsp: ENSP00000413432.1:p.Ser883Asn
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2891G>A
  hgvsp: ENSP00000378857.3:p.Ser964Asn
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.524G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2808G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2806G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2923G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.279G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1145G>A
  hgvsp: ENSP00000412195.2:p.Ser382Asn
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2801G>A
  hgvsp: ENSP00000477389.1:p.Ser934Asn
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3141
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser964Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum

3-49052051-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052051
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052051
    reference: chr 3
allele count: 4
allele frequency: 3.299132328197684e-5
allele num: 121244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2924C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2649C>T
  hgvsp: ENST00000448293.1:c.2649C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2802C>T
  hgvsp: ENST00000608424.1:c.2802C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.280C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.525C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2807C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1146C>T
  hgvsp: ENST00000415265.2:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2809C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2892C>T
  hgvsp: ENST00000395474.3:c.2892C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser964Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

3-49052052-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052052
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052052
    reference: chr 3
allele count: 15
allele frequency: 1.237011380504701e-4
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2925G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2803G>A
  hgvsp: ENSP00000477389.1:p.Ala935Thr
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2810G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1147G>A
  hgvsp: ENSP00000412195.2:p.Ala383Thr
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.526G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2893G>A
  hgvsp: ENSP00000378857.3:p.Ala965Thr
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.281G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2650G>A
  hgvsp: ENSP00000413432.1:p.Ala884Thr
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2808G>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala965Thr
num of homozygotes: 1
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-49052063-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052063
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052063
    reference: chr 3
allele count: 3
allele frequency: 2.473573984597879e-5
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1158T>G
  hgvsp: ENSP00000412195.2:p.Asp386Glu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2661T>G
  hgvsp: ENSP00000413432.1:p.Asp887Glu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.537T>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2819T>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.292T>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2814T>G
  hgvsp: ENSP00000477389.1:p.Asp938Glu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2904T>G
  hgvsp: ENSP00000378857.3:p.Asp968Glu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2821T>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2936T>G
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26754
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp968Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

3-49052064-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052064
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052064
    reference: chr 3
allele count: 3
allele frequency: 2.473614775725594e-5
allele num: 121280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2815G>A
  hgvsp: ENSP00000477389.1:p.Gly939Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.293G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2662G>A
  hgvsp: ENSP00000413432.1:p.Gly888Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2820G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2905G>A
  hgvsp: ENSP00000378857.3:p.Gly969Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2937G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1159G>A
  hgvsp: ENSP00000412195.2:p.Gly387Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.538G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2822G>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6172
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly969Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

3-49052074-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052074
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052074
    reference: chr 3
allele count: 5
allele frequency: 4.122283415229364e-5
allele num: 121292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2825C>T
  hgvsp: ENSP00000477389.1:p.Ala942Val
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1169C>T
  hgvsp: ENSP00000412195.2:p.Ala390Val
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2915C>T
  hgvsp: ENSP00000378857.3:p.Ala972Val
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2830C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2947C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2672C>T
  hgvsp: ENSP00000413432.1:p.Ala891Val
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2832C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.303C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.548C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5377
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5058
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala972Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

3-49052076-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052076
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052076
    reference: chr 3
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1171T>C
  hgvsp: ENSP00000412195.2:p.Phe391Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2832T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2917T>C
  hgvsp: ENSP00000378857.3:p.Phe973Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.550T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2949T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2834T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2827T>C
  hgvsp: ENSP00000477389.1:p.Phe943Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2674T>C
  hgvsp: ENSP00000413432.1:p.Phe892Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.305T>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13257
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe973Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

3-49052084-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052084
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052084
    reference: chr 3
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2835T>A
  hgvsp: ENSP00000477389.1:p.Asp945Glu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2957T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2682T>A
  hgvsp: ENSP00000413432.1:p.Asp894Glu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2840T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2842T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1179T>A
  hgvsp: ENSP00000412195.2:p.Asp393Glu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.313T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.558T>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2925T>A
  hgvsp: ENSP00000378857.3:p.Asp975Glu
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26775
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp975Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-49052088-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052088
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052088
    reference: chr 3
allele count: 4
allele frequency: 3.29777235477435e-5
allele num: 121294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2686A>C
  hgvsp: ENSP00000413432.1:p.Thr896Pro
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.317A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2844A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.562A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1183A>C
  hgvsp: ENSP00000412195.2:p.Thr395Pro
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2929A>C
  hgvsp: ENSP00000378857.3:p.Thr977Pro
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2839A>C
  hgvsp: ENSP00000477389.1:p.Thr947Pro
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2961A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2846A>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 20955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13087
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr977Pro
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

3-49052096-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052096
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052096
    reference: chr 3
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2969G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2847G>C
  hgvsp: ENSP00000477389.1:p.Met949Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2694G>C
  hgvsp: ENSP00000413432.1:p.Met898Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2937G>C
  hgvsp: ENSP00000378857.3:p.Met979Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.325G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.570G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2854G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1191G>C
  hgvsp: ENSP00000412195.2:p.Met397Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2852G>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10800
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26755
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met979Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

3-49052110-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052110
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052110
    reference: chr 3
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.584C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2866C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2951C>T
  hgvsp: ENSP00000378857.3:p.Ser984Phe
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2868C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2861C>T
  hgvsp: ENSP00000477389.1:p.Ser954Phe
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.339C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2708C>T
  hgvsp: ENSP00000413432.1:p.Ser903Phe
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2983C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1205C>T
  hgvsp: ENSP00000412195.2:p.Ser402Phe
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26751
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6184
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser984Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

3-49052113-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052113
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052113
    reference: chr 3
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2871C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2954C>G
  hgvsp: ENSP00000378857.3:p.Thr985Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2711C>G
  hgvsp: ENSP00000413432.1:p.Thr904Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2869C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.587C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2864C>G
  hgvsp: ENSP00000477389.1:p.Thr955Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1208C>G
  hgvsp: ENSP00000412195.2:p.Thr403Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2986C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.342C>G
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr985Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-49052124-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052124
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052124
    reference: chr 3
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1219C>A
  hgvsp: ENSP00000412195.2:p.Pro407Thr
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2882C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2875C>A
  hgvsp: ENSP00000477389.1:p.Pro959Thr
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.598C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2880C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.353C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2965C>A
  hgvsp: ENSP00000378857.3:p.Pro989Thr
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2722C>A
  hgvsp: ENSP00000413432.1:p.Pro908Thr
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2997C>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6184
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10795
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro989Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

3-49052126-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052126
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052126
    reference: chr 3
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2882T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.355T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2877T>C
  hgvsp: ENST00000608424.1:c.2877T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1221T>C
  hgvsp: ENST00000415265.2:c.1221T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2967T>C
  hgvsp: ENST00000395474.3:c.2967T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2724T>C
  hgvsp: ENST00000448293.1:c.2724T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.2999T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.600T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2884T>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro989Pro
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

3-49052131-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052131
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052131
    reference: chr 3
allele count: 5
allele frequency: 4.124459695779853e-5
allele num: 121228
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3004T>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1226T>G
  hgvsp: ENSP00000412195.2:p.Val409Gly
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2882T>G
  hgvsp: ENSP00000477389.1:p.Val961Gly
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2972T>G
  hgvsp: ENSP00000378857.3:p.Val991Gly
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.605T>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2887T>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2729T>G
  hgvsp: ENSP00000413432.1:p.Val910Gly
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2889T>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.360T>G
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val991Gly
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

3-49052146-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052146
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052146
    reference: chr 3
allele count: 1
allele frequency: 8.260639703938672e-6
allele num: 121056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2897C>T
  hgvsp: ENSP00000477389.1:p.Pro966Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1241C>T
  hgvsp: ENSP00000412195.2:p.Pro414Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2902C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2744C>T
  hgvsp: ENSP00000413432.1:p.Pro915Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.375C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2987C>T
  hgvsp: ENSP00000378857.3:p.Pro996Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.620C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2904C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3019C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13205
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26036
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro996Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

3-49052147-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052147
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052147
    reference: chr 3
allele count: 1
allele frequency: 8.262004692818665e-6
allele num: 121036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3020C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1242C>T
  hgvsp: ENST00000415265.2:c.1242C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2903C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2745C>T
  hgvsp: ENST00000448293.1:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.376C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2898C>T
  hgvsp: ENST00000608424.1:c.2898C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.621C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2905C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2988C>T
  hgvsp: ENST00000395474.3:c.2988C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5066
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3152
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro996Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

3-49052149-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052149
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052149
    reference: chr 3
allele count: 2
allele frequency: 1.652701340340787e-5
allele num: 121014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2900A>T
  hgvsp: ENSP00000477389.1:p.Tyr967Phe
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.378A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.623A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2907A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2747A>T
  hgvsp: ENSP00000413432.1:p.Tyr916Phe
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1244A>T
  hgvsp: ENSP00000412195.2:p.Tyr415Phe
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2990A>T
  hgvsp: ENSP00000378857.3:p.Tyr997Phe
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3022A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2905A>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12735
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Tyr997Phe
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

3-49052151-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052151
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052151
    reference: chr 3
allele count: 6
allele frequency: 4.95884161459883e-5
allele num: 120996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000498023
  gene symbol: WDR6
  hgvsc: ENST00000498023.1:n.625C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2749C>T
  hgvsp: ENSP00000413432.1:p.Arg917Trp
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2907C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2902C>T
  hgvsp: ENSP00000477389.1:p.Arg968Trp
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2992C>T
  hgvsp: ENSP00000378857.3:p.Arg998Trp
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2909C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3024C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1246C>T
  hgvsp: ENSP00000412195.2:p.Arg416Trp
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.380C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13196
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5345
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg998Trp
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

3-49052166-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052166
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052166
    reference: chr 3
allele count: 1
allele frequency: 8.275679433281473e-6
allele num: 120836
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2749+15T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2992+15T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1246+15T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.380+15T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2907+15T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2902+15T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3024+15T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2909+15T>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5059
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24845
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3171
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD

3-49052167-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052167
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052167
    reference: chr 3
allele count: 1
allele frequency: 8.277049397430804e-6
allele num: 120816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3024+16G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2992+16G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2907+16G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2749+16G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2909+16G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.380+16G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1246+16G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2902+16G>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3172
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/3-49052169-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052169
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052169
    reference: chr 3
allele count: 1
allele frequency: 8.278968109414843e-6
allele num: 120788
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2749+18A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3024+18A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1246+18A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2907+18A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2902+18A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2992+18A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2909+18A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.380+18A>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13090
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5332
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/3-49052202-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052202
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052202
    reference: chr 3
allele count: 2
allele frequency: 1.66220641279234e-5
allele num: 120322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2909+51C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3024+51C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2907+51C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.380+51C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2749+51C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1246+51C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2992+51C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2902+51C>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3200
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/3-49052209-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052209
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052209
    reference: chr 3
allele count: 1
allele frequency: 8.404350091607416e-6
allele num: 118986
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-49A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-49A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-49A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-49A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-49A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-49A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-49A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-49A>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18052
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3825
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20580
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8973
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/3-49052210-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052210
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052210
    reference: chr 3
allele count: 1
allele frequency: 8.414533582403528e-6
allele num: 118842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-48C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-48C>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2456
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20467
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3820
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

3-49052210-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052210
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052208
    reference: chr 3
allele count: 2
allele frequency: 1.682906716480706e-5
allele num: 118842
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-47_381-46delAT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-47_*2910-46delAT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-47_2750-46delAT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-47_2993-46delAT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-47_*2908-46delAT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-47_3025-46delAT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-47_2903-46delAT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-47_1247-46delAT
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3820
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8770
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5191
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: CAT
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

3-49052215-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052215
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052215
    reference: chr 3
allele count: 1
allele frequency: 8.444804756114038e-6
allele num: 118416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-43G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-43G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-43G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-43G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-43G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-43G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-43G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-43G>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2556
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3798
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1863
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

3-49052221-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052221
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052221
    reference: chr 3
allele count: 44
allele frequency: 3.754842893959823e-4
allele num: 117182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-37C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-37C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-37C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-37C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-37C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-37C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-37C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-37C>G
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 17756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15445
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

3-49052221-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052221
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052221
    reference: chr 3
allele count: 8
allele frequency: 6.826987079926952e-5
allele num: 117182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-37C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-37C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-37C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-37C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-37C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-37C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-37C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-37C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3945
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8219
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2377
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8819
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

3-49052222-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052222
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052222
    reference: chr 3
allele count: 2
allele frequency: 1.695547492285259e-5
allele num: 117956
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-36G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-36G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-36G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-36G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-36G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-36G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-36G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-36G>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

3-49052231-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052231
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052231
    reference: chr 3
allele count: 1
allele frequency: 8.489108473828079e-6
allele num: 117798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-27A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-27A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-27A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-27A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-27A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-27A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-27A>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-27A>G
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5168
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20427
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3985
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/3-49052232-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052232
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052232
    reference: chr 3
allele count: 2
allele frequency: 1.700969552645008e-5
allele num: 117580
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-26C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-26C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-26C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-26C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-26C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-26C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-26C>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-26C>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/3-49052233-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052233
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052233
    reference: chr 3
allele count: 1
allele frequency: 8.494877588813945e-6
allele num: 117718
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-25A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-25A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-25A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-25A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-25A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-25A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-25A>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-25A>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5169
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8389
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3985
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3828
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

3-49052238-C-CCCTCTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052238
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052244
    reference: chr 3
allele count: 1
allele frequency: 8.510928031592565e-6
allele num: 117496
alternate allele: CCCTCTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-10_1247-5dupCTTCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-10_2993-5dupCTTCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-10_2903-5dupCTTCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-10_*2910-5dupCTTCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-10_*2908-5dupCTTCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-10_2750-5dupCTTCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-10_3025-5dupCTTCCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-10_381-5dupCTTCCT
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5163
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8388
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3986
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

3-49052238-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052238
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052238
    reference: chr 3
allele count: 1
allele frequency: 8.510928031592565e-6
allele num: 117496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-20C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-20C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-20C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-20C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-20C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-20C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-20C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-20C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15590
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8989
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-49052240-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052240
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052240
    reference: chr 3
allele count: 1
allele frequency: 8.511942254983741e-6
allele num: 117482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-18C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-18C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-18C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-18C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-18C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-18C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-18C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-18C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7672
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD

3-49052245-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052245
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052245
    reference: chr 3
allele count: 2
allele frequency: 1.701982809973619e-5
allele num: 117510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-13C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-13C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-13C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-13C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-13C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-13C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-13C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-13C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20497
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

3-49052248-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052248
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052248
    reference: chr 3
allele count: 76
allele frequency: 6.466984343090538e-4
allele num: 117520
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3025-10C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.381-10C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2903-10C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1247-10C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2750-10C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2993-10C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2910-10C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2908-10C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

3-49052263-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052263
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052263
    reference: chr 3
allele count: 1
allele frequency: 8.497043029025899e-6
allele num: 117688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.386G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2913G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.2998G>C
  hgvsp: ENSP00000378857.3:p.Gly1000Arg
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3030G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2915G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2755G>C
  hgvsp: ENSP00000413432.1:p.Gly919Arg
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2908G>C
  hgvsp: ENSP00000477389.1:p.Gly970Arg
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1252G>C
  hgvsp: ENSP00000412195.2:p.Gly418Arg
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7683
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9016
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly1000Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-49052266-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052266
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052267
    reference: chr 3
allele count: 1
allele frequency: 8.490982576503753e-6
allele num: 117772
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2916dupC
  hgvsp: ENSP00000477389.1:p.Ser973LeufsTer21
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1260dupC
  hgvsp: ENSP00000412195.2:p.Ser421LeufsTer21
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3006dupC
  hgvsp: ENSP00000378857.3:p.Ser1003LeufsTer21
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2921dupC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.394dupC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2763dupC
  hgvsp: ENSP00000413432.1:p.Ser922LeufsTer21
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2923dupC
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3038dupC
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2358
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3987
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser1003LeufsTer21
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

3-49052266-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052266
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052266
    reference: chr 3
allele count: 1
allele frequency: 8.490982576503753e-6
allele num: 117772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1255A>T
  hgvsp: ENSP00000412195.2:p.Thr419Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2911A>T
  hgvsp: ENSP00000477389.1:p.Thr971Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2918A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3001A>T
  hgvsp: ENSP00000378857.3:p.Thr1001Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2758A>T
  hgvsp: ENSP00000413432.1:p.Thr920Ser
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2916A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.389A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3033A>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2358
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3987
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr1001Ser
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

3-49052267-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052267
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052267
    reference: chr 3
allele count: 1
allele frequency: 8.488964346349745e-6
allele num: 117800
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1256C>T
  hgvsp: ENSP00000412195.2:p.Thr419Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2919C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3002C>T
  hgvsp: ENSP00000378857.3:p.Thr1001Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2912C>T
  hgvsp: ENSP00000477389.1:p.Thr971Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2917C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3034C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2759C>T
  hgvsp: ENSP00000413432.1:p.Thr920Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.390C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2357
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr1001Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

3-49052273-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052273
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052273
    reference: chr 3
allele count: 4
allele frequency: 3.38810774182619e-5
allele num: 118060
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3008C>T
  hgvsp: ENSP00000378857.3:p.Ser1003Phe
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2918C>T
  hgvsp: ENSP00000477389.1:p.Ser973Phe
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.396C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2923C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2925C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3040C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1262C>T
  hgvsp: ENSP00000412195.2:p.Ser421Phe
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2765C>T
  hgvsp: ENSP00000413432.1:p.Ser922Phe
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21122
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser1003Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

3-49052274-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052274
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052274
    reference: chr 3
allele count: 2
allele frequency: 1.693480101608806e-5
allele num: 118100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2926C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2924C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2766C>G
  hgvsp: ENST00000448293.1:c.2766C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3041C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3009C>G
  hgvsp: ENST00000395474.3:c.3009C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2919C>G
  hgvsp: ENST00000608424.1:c.2919C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.397C>G
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1263C>G
  hgvsp: ENST00000415265.2:c.1263C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9054
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2549
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser1003Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

3-49052274-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052274
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052272
    reference: chr 3
allele count: 1
allele frequency: 8.467400508044031e-6
allele num: 118100
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2920_2921delCT
  hgvsp: ENSP00000477389.1:p.Leu974AspfsTer19
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2927_*2928delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1264_1265delCT
  hgvsp: ENSP00000412195.2:p.Leu422AspfsTer19
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2767_2768delCT
  hgvsp: ENSP00000413432.1:p.Leu923AspfsTer19
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2925_*2926delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3010_3011delCT
  hgvsp: ENSP00000378857.3:p.Leu1004AspfsTer19
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3042_3043delCT
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.398_399delCT
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2281
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu1004AspfsTer19
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: CCT
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

3-49052277-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052277
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052277
    reference: chr 3
allele count: 1
allele frequency: 8.459234946791412e-6
allele num: 118214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2927G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.400G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2769G>A
  hgvsp: ENST00000448293.1:c.2769G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3012G>A
  hgvsp: ENST00000395474.3:c.3012G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2929G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2922G>A
  hgvsp: ENST00000608424.1:c.2922G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1266G>A
  hgvsp: ENST00000415265.2:c.1266G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3044G>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2549
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8326
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu1004Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

3-49052277-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052277
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052277
    reference: chr 3
allele count: 1
allele frequency: 8.459234946791412e-6
allele num: 118214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2929G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.400G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3012G>C
  hgvsp: ENST00000395474.3:c.3012G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2769G>C
  hgvsp: ENST00000448293.1:c.2769G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2922G>C
  hgvsp: ENST00000608424.1:c.2922G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3044G>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1266G>C
  hgvsp: ENST00000415265.2:c.1266G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2927G>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5184
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3990
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9062
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu1004Leu
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

3-49052282-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052282
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052282
    reference: chr 3
allele count: 3
allele frequency: 2.532628699748425e-5
allele num: 118454
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1271T>C
  hgvsp: ENSP00000412195.2:p.Leu424Pro
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2934T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2927T>C
  hgvsp: ENSP00000477389.1:p.Leu976Pro
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2932T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3017T>C
  hgvsp: ENSP00000378857.3:p.Leu1006Pro
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2774T>C
  hgvsp: ENSP00000413432.1:p.Leu925Pro
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3049T>C
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.405T>C
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu1006Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

3-49052285-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052285
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052285
    reference: chr 3
allele count: 1
allele frequency: 8.430281571404485e-6
allele num: 118620
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2937A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2935A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2930A>T
  hgvsp: ENSP00000477389.1:p.Gln977Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1274A>T
  hgvsp: ENSP00000412195.2:p.Gln425Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.408A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2777A>T
  hgvsp: ENSP00000413432.1:p.Gln926Leu
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3052A>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3020A>T
  hgvsp: ENSP00000378857.3:p.Gln1007Leu
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1938
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9092
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln1007Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

3-49052309-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052309
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052309
    reference: chr 3
allele count: 1
allele frequency: 8.338753523123364e-6
allele num: 119922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2954G>A
  hgvsp: ENSP00000477389.1:p.Ser985Asn
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.432G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3044G>A
  hgvsp: ENSP00000378857.3:p.Ser1015Asn
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2801G>A
  hgvsp: ENSP00000413432.1:p.Ser934Asn
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2961G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3076G>A
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1298G>A
  hgvsp: ENSP00000412195.2:p.Ser433Asn
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2959G>A
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9238
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8321
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser1015Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

3-49052318-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 49052318
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 49052318
    reference: chr 3
allele count: 1
allele frequency: 8.303992559622666e-6
allele num: 120424
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000477389
  ensembl transcript: ENST00000608424
  gene symbol: WDR6
  hgvsc: ENST00000608424.1:c.2963C>T
  hgvsp: ENSP00000477389.1:p.Thr988Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000413432
  ensembl transcript: ENST00000448293
  gene symbol: WDR6
  hgvsc: ENST00000448293.1:c.2810C>T
  hgvsp: ENSP00000413432.1:p.Thr937Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000378857
  ensembl transcript: ENST00000395474
  gene symbol: WDR6
  hgvsc: ENST00000395474.3:c.3053C>T
  hgvsp: ENSP00000378857.3:p.Thr1018Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000395993
  ensembl transcript: ENST00000420783
  gene symbol: WDR6
  hgvsc: ENST00000420783.3:c.*2968C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000471162
  gene symbol: WDR6
  hgvsc: ENST00000471162.1:n.3085C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178252
  ensembl transcript: ENST00000492780
  gene symbol: WDR6
  hgvsc: ENST00000492780.1:n.441C>T
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000412195
  ensembl transcript: ENST00000415265
  gene symbol: WDR6
  hgvsc: ENST00000415265.2:c.1307C>T
  hgvsp: ENSP00000412195.2:p.Thr436Ile
  variant of: http://identifiers.org/hgnc/12758
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000178252
  ensembl protein: ENSP00000414157
  ensembl transcript: ENST00000452875
  gene symbol: WDR6
  hgvsc: ENST00000452875.1:c.*2970C>T
  variant of: http://identifiers.org/hgnc/12758
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24066
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9324
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr1018Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS

GenotypeQuality
all individuals: 1516
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5457
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5029
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27279
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 13
allele frequency: 7.873062015503876e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.884e1

DP
type: SiteQuality
SIO_000300: 1.850459e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.293e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26877
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.25e1
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GenotypeQuality
all individuals: 1616
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11009
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
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GenotypeQuality
all individuals: 80
bin: 5.25e1
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GenotypeQuality
all individuals: 5024
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 5438
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3184
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

DP
type: SiteQuality
SIO_000300: 1.847326e6

VQSLOD
type: SiteQuality
SIO_000300: -3.347e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.571e0

MQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

FS
type: SiteQuality
SIO_000300: 8.489000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.49e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.044e1

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3184
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 100
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GenotypeQuality
all individuals: 5024
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1616
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11009
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.894076789504148e-4
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 1.847326e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.571e0

VQSLOD
type: SiteQuality
SIO_000300: -3.347e-1

FS
type: SiteQuality
SIO_000300: 8.489000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

QD
type: SiteQuality
SIO_000300: 1.044e1

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 1517
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1614
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 5029
bin: 9.75e1
variant carriers: 7

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.008197459688316e-5
allele num: 66606
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

FS
type: SiteQuality
SIO_000300: 1.179e0

MQ
type: SiteQuality
SIO_000300: 6.009e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

DP
type: SiteQuality
SIO_000300: 1.847838e6

QD
type: SiteQuality
SIO_000300: 1.148e1

GenotypeQuality
all individuals: 5433
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 26852
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 48
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GenotypeQuality
all individuals: 1616
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variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 5122
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GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
all individuals: 155
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GenotypeQuality
all individuals: 3196
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variant carriers: 0

GenotypeQuality
all individuals: 92
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GenotypeQuality
all individuals: 5036
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10971
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.847196e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

FS
type: SiteQuality
SIO_000300: 4.162e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.311e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.893e0

VQSLOD
type: SiteQuality
SIO_000300: -8.939e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.057e1

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 10970
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variant carriers: 0

GenotypeQuality
all individuals: 255
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variant carriers: 0

GenotypeQuality
all individuals: 99
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GenotypeQuality
all individuals: 26860
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5037
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5435
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variant carriers: 0

GenotypeQuality
all individuals: 3195
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66622
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

DP
type: SiteQuality
SIO_000300: 1.847219e6

VQSLOD
type: SiteQuality
SIO_000300: 6.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 1.443e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.491e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

FS
type: SiteQuality
SIO_000300: 8.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 4
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5124
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002101471029721e-5
allele num: 66620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.879e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
SIO_000300: -3.96e-1

FS
type: SiteQuality
SIO_000300: 8.44e-1

QD
type: SiteQuality
SIO_000300: 1.116e1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 1.847187e6

GenotypeQuality
all individuals: 1517
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 74
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GenotypeQuality
all individuals: 258
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 71
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.528e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.149999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.846909e6

VQSLOD
type: SiteQuality
SIO_000300: -4.295e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

QD
type: SiteQuality
SIO_000300: 7.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.028e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10952
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5039
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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FS
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QD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

MQRankSum
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DP
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ReadPosRankSum
type: SiteQuality
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MQ
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 3.467406380027739e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
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African
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allele frequency: 0.0e0
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South Asian
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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QD
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InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66610
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MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

ClippingRankSum
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InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 1.84656e6

QD
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.009e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501366243281386e-5
allele num: 66606
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.711e1

BaseQRankSum
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SIO_000300: -3.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 9.890000000000001e0

VQSLOD
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SIO_000300: -2.597e0

ClippingRankSum
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SIO_000300: -1.101e0

DP
type: SiteQuality
SIO_000300: 1.846578e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.66e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.846658e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.313e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.618e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16492
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004717406327935e-5
allele num: 66562
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East Asian
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allele count: 0
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MQ
type: SiteQuality
SIO_000300: 5.955e1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1385

South Asian
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allele count: 83
allele frequency: 5.03030303030303e-3
allele num: 16500
num of homozygotes: 2

Other
type: Population
allele count: 10
allele frequency: 1.103752759381899e-2
allele num: 906
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Latino
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allele count: 40
allele frequency: 3.454828122300916e-3
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1171
allele frequency: 1.75836386569764e-2
allele num: 66596
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African
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allele frequency: 5.306831339251254e-3
allele num: 10364
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
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European (Finnish)
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allele count: 38
allele frequency: 5.745388569700635e-3
allele num: 6614
num of homozygotes: 0

MQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.22e-1

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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East Asian
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South Asian
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African
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Other
type: Population
allele count: 0
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allele num: 906
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Latino
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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ClippingRankSum
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MQ
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FS
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.503e0

MQRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 906
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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South Asian
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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FS
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QD
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.835e0

VQSLOD
type: SiteQuality
SIO_000300: 2.6e-1

DP
type: SiteQuality
SIO_000300: 1.928251e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.541e1

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

MQRankSum
type: SiteQuality
SIO_000300: -3.029e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.928823e6

FS
type: SiteQuality
SIO_000300: 4.232e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.57e-1

QD
type: SiteQuality
SIO_000300: 1.741e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.19e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.059137178865729e-4
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.934e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

QD
type: SiteQuality
SIO_000300: 1.3e1

FS
type: SiteQuality
SIO_000300: 5.41e-1

DP
type: SiteQuality
SIO_000300: 1.929612e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.411e0

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1481
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.298e0

MQRankSum
type: SiteQuality
SIO_000300: -2.49e-1

FS
type: SiteQuality
SIO_000300: 9.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.348e1

DP
type: SiteQuality
SIO_000300: 1.93033e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.89e-1

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

MQRankSum
type: SiteQuality
SIO_000300: 5.49e-1

QD
type: SiteQuality
SIO_000300: 1.188e1

FS
type: SiteQuality
SIO_000300: 2.656e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.187e0

DP
type: SiteQuality
SIO_000300: 1.93113e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.91e-1

GenotypeQuality
all individuals: 5043
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 14

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 8.482792050412022e-4
allele num: 16504
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.67e-1

QD
type: SiteQuality
SIO_000300: 1.483e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.097e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.099e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.59e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.467406380027739e-4
allele num: 8652
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.932993e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.19e-1

FS
type: SiteQuality
SIO_000300: 1.231e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

QD
type: SiteQuality
SIO_000300: 1.452e1

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: 7.71e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.467406380027739e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.89e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.25e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.933249e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.500750075007501e-5
allele num: 66660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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BaseQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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VQSLOD
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
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FS
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BaseQRankSum
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MQRankSum
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MQ
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VQSLOD
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DP
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66662
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Latino
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DP
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InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66656
num of homozygotes: 0

Latino
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allele num: 11578
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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QD
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MQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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num of homozygotes: 0

South Asian
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Latino
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East Asian
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Other
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQ
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QD
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DP
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ClippingRankSum
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FS
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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European (Finnish)
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Latino
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South Asian
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Other
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FS
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BaseQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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African
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South Asian
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East Asian
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Other
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DP
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BaseQRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQRankSum
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MQ
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FS
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Latino
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South Asian
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African
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MQRankSum
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BaseQRankSum
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MQ
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FS
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 7.505704335294824e-5
allele num: 66616
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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VQSLOD
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MQ
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FS
type: SiteQuality
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ClippingRankSum
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MQRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.502268425322237e-5
allele num: 66566
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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DP
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MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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FS
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ClippingRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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FS
type: SiteQuality
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ClippingRankSum
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MQ
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ReadPosRankSum
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DP
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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SIO_000300: -1.232e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.005530175522962e-5
allele num: 66544
num of homozygotes: 0

Other
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allele num: 904
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.276e1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

ReadPosRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 6.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.015e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 2.448879637565814e-4
allele num: 16334
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.005710850616171e-5
allele num: 66540
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.22e-1

FS
type: SiteQuality
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QD
type: SiteQuality
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DP
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MQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

BaseQRankSum
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ClippingRankSum
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SIO_000300: -2.3e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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allele frequency: 1.503895088278642e-5
allele num: 66494
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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DP
type: SiteQuality
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ReadPosRankSum
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FS
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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African
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South Asian
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Other
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European (Finnish)
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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QD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Latino
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Other
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African
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East Asian
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European (Finnish)
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ClippingRankSum
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.259604484191964e-4
allele num: 15878
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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African
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East Asian
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MQRankSum
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BaseQRankSum
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SIO_000300: -1.769e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.332e1

DP
type: SiteQuality
SIO_000300: 1.901054e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.309e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 723
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14982
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.569e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.29e0

VQSLOD
type: SiteQuality
SIO_000300: -1.402e0

FS
type: SiteQuality
SIO_000300: 6.97e-1

DP
type: SiteQuality
SIO_000300: 1.977162e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.189e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1866
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515105602860519e-5
allele num: 66002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 2.507e0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 6.032e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

QD
type: SiteQuality
SIO_000300: 1.915e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

DP
type: SiteQuality
SIO_000300: 1.975854e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.301e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.23e-1

GenotypeQuality
all individuals: 4011
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 8956
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515105602860519e-5
allele num: 66002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.750390015600624e-5
allele num: 10256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.032e1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 2.507e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.301e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.23e-1

QD
type: SiteQuality
SIO_000300: 1.915e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

DP
type: SiteQuality
SIO_000300: 1.975854e6

GenotypeQuality
all individuals: 148
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 3998
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variant carriers: 0

GenotypeQuality
all individuals: 8889
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517911353976928e-5
allele num: 65880
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.519e0

VQSLOD
type: SiteQuality
SIO_000300: -1.857e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.678e0

QD
type: SiteQuality
SIO_000300: 1.957e1

DP
type: SiteQuality
SIO_000300: 1.969702e6

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

GenotypeQuality
all individuals: 8819
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2377
bin: 2.25e1
variant carriers: 5

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 330
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variant carriers: 5

GenotypeQuality
all individuals: 202
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2516
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 219
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variant carriers: 1

GenotypeQuality
all individuals: 3774
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5117
bin: 7.75e1
variant carriers: 3

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 19915
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 8219
bin: 9.75e1
variant carriers: 7

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.978451715881883e-4
allele num: 10024
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 33
allele frequency: 5.048032796916111e-4
allele num: 65372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.067484662576687e-4
allele num: 6520
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.889e0

FS
type: SiteQuality
SIO_000300: 8.4845e1

VQSLOD
type: SiteQuality
SIO_000300: -3.691e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.387e0

DP
type: SiteQuality
SIO_000300: 1.961429e6

MQ
type: SiteQuality
SIO_000300: 5.766e1

QD
type: SiteQuality
SIO_000300: 1.94e0

GenotypeQuality
all individuals: 334
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variant carriers: 0

GenotypeQuality
all individuals: 489
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variant carriers: 0

GenotypeQuality
all individuals: 307
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 897
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variant carriers: 0

GenotypeQuality
all individuals: 1831
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.589120724469192e-5
allele num: 65372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73550850399167e-4
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.992817238627295e-4
allele num: 10024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14250
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.766e1

FS
type: SiteQuality
SIO_000300: 8.4845e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.387e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.889e0

QD
type: SiteQuality
SIO_000300: 1.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.961429e6

MQRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.92e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.815469179426777e-5
allele num: 10188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521051350693599e-5
allele num: 65744
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.899999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 1.937093e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

QD
type: SiteQuality
SIO_000300: 1.277e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.321e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
type: SiteQuality
SIO_000300: -5.48e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.029382820188388e-5
allele num: 14226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.542e0

FS
type: SiteQuality
SIO_000300: 3.469e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

QD
type: SiteQuality
SIO_000300: 1.164e1

VQSLOD
type: SiteQuality
SIO_000300: 6.75e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.930086e6

GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 66
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3986
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.421666192777936e-4
allele num: 14068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65694
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.649999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.149999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 1.929965e6

QD
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 7.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: -6.09e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8984
bin: 6.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.52151421094273e-5
allele num: 65724
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14162
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.929805e6

BaseQRankSum
type: SiteQuality
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MQRankSum
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SIO_000300: -2.5e-2

FS
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SIO_000300: 0.0e0

VQSLOD
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ReadPosRankSum
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SIO_000300: -9.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.46e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
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allele frequency: 9.848335631278314e-5
allele num: 10154
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11540
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65704
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East Asian
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allele frequency: 0.0e0
allele num: 8642
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QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 2.04e0

MQRankSum
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FS
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SIO_000300: 2.438e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.68e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.3e-3

MQ
type: SiteQuality
SIO_000300: 5.945e1

DP
type: SiteQuality
SIO_000300: 1.929451e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13970
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65704
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.848335631278314e-5
allele num: 10154
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -1.465e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.68e-1

DP
type: SiteQuality
SIO_000300: 1.929451e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
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SIO_000300: 2.41e0

VQSLOD
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SIO_000300: 2.04e0

FS
type: SiteQuality
SIO_000300: 2.438e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.522394421946838e-5
allele num: 65686
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.882e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.09e-1

FS
type: SiteQuality
SIO_000300: 6.382e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.723e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-2

VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.929063e6

MQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

QD
type: SiteQuality
SIO_000300: 1.33e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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South Asian
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allele count: 1
allele frequency: 7.14694110920526e-5
allele num: 13992
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.522116350573838e-5
allele num: 65698
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.33e0

BaseQRankSum
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DP
type: SiteQuality
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ClippingRankSum
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SIO_000300: -6.55e-1

MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
SIO_000300: 1.254e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 75

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele num: 872
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65682
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South Asian
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East Asian
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allele count: 74
allele frequency: 8.560851457658492e-3
allele num: 8644
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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MQ
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11538
num of homozygotes: 0

East Asian
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South Asian
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Other
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.52114390021296e-5
allele num: 65740
num of homozygotes: 0

African
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European (Finnish)
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BaseQRankSum
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MQ
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MQRankSum
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FS
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DP
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InbreedingCoeff
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ClippingRankSum
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QD
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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Other
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European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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allele num: 14154
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BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
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FS
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ClippingRankSum
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DP
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QD
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
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allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65772
num of homozygotes: 0

InbreedingCoeff
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QD
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MQRankSum
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DP
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VQSLOD
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MQ
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FS
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8334
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.822e0

QD
type: SiteQuality
SIO_000300: 1.531e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 7.538e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.31e-1

DP
type: SiteQuality
SIO_000300: 1.930653e6

GenotypeQuality
all individuals: 107
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8332
bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.075703262652652e-5
allele num: 65836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 1.146e1

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

FS
type: SiteQuality
SIO_000300: 5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.623e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.933911e6

VQSLOD
type: SiteQuality
SIO_000300: 3.12e0

GenotypeQuality
all individuals: 8329
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 706
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3987
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variant carriers: 0

GenotypeQuality
all individuals: 5181
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.037759348704396e-5
allele num: 65838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.114e0

VQSLOD
type: SiteQuality
SIO_000300: 3.58e0

QD
type: SiteQuality
SIO_000300: 1.164e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.36e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: 3.64e-1

DP
type: SiteQuality
SIO_000300: 1.934232e6

GenotypeQuality
all individuals: 8329
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 1867
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

FS
type: SiteQuality
SIO_000300: 1.114e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.58e0

MQRankSum
type: SiteQuality
SIO_000300: 3.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.934232e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.99e-1

QD
type: SiteQuality
SIO_000300: 1.164e1

GenotypeQuality
all individuals: 5184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 125
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3990
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variant carriers: 0

GenotypeQuality
all individuals: 21389
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.915629322268326e-5
allele num: 14460
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.936298e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 4.954e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.498e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.11e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

GenotypeQuality
all individuals: 2188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 121
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variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2549
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8326
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 125
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.915629322268326e-5
allele num: 14460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.936298e6

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.498e0

FS
type: SiteQuality
SIO_000300: 4.954e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.198e1

VQSLOD
type: SiteQuality
SIO_000300: 7.11e-1

GenotypeQuality
all individuals: 2070
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 135
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.548762736535663e-5
allele num: 65952
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.47e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 1.94043e6

MQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 1.362e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8322
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515472979116782e-5
allele num: 65986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14694
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 9.710000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -6.16e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.943064e6

MQRankSum
type: SiteQuality
SIO_000300: -4.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.27e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 23620
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variant carriers: 0

GenotypeQuality
all individuals: 2552
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508341126429153e-5
allele num: 66298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.364e0

FS
type: SiteQuality
SIO_000300: 7.438e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.95e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.43e0

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-2

QD
type: SiteQuality
SIO_000300: 6.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e-1

DP
type: SiteQuality
SIO_000300: 1.965756e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.67e-1

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3995
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3901
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1865
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5206
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8319
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505208019748329e-5
allele num: 66436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15854
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.05e-1

FS
type: SiteQuality
SIO_000300: 2.193e0