1-114499255-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499255
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499255
    reference: chr 1
allele count: 1
allele frequency: 8.285141427364165e-6
allele num: 120698
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1414A>G
  hgvsp: ENSP00000358567.2:p.Met472Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.292A>G
  hgvsp: ENSP00000340956.4:p.Met98Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1414A>G
  hgvsp: ENSP00000358568.1:p.Met472Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1414A>G
  hgvsp: ENSP00000407442.3:p.Met472Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1414A>G
  hgvsp: ENSP00000358572.4:p.Met472Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.232A>G
  hgvsp: ENSP00000358566.1:p.Met78Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1414A>G
  hgvsp: ENSP00000358571.1:p.Met472Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1414A>G
  hgvsp: ENSP00000358574.4:p.Met472Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.232A>G
  hgvsp: ENSP00000384960.1:p.Met78Val
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1919
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3021
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Met472Val
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

1-114499256-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499256
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499256
    reference: chr 1
allele count: 1
allele frequency: 8.282945415389712e-6
allele num: 120730
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1415T>C
  hgvsp: ENSP00000358574.4:p.Met472Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1415T>C
  hgvsp: ENSP00000358571.1:p.Met472Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.233T>C
  hgvsp: ENSP00000358566.1:p.Met78Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1415T>C
  hgvsp: ENSP00000407442.3:p.Met472Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1415T>C
  hgvsp: ENSP00000358568.1:p.Met472Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1415T>C
  hgvsp: ENSP00000358572.4:p.Met472Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1415T>C
  hgvsp: ENSP00000358567.2:p.Met472Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.293T>C
  hgvsp: ENSP00000340956.4:p.Met98Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.233T>C
  hgvsp: ENSP00000384960.1:p.Met78Thr
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met472Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-114499261-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499261
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499261
    reference: chr 1
allele count: 8
allele frequency: 6.615835001075073e-5
allele num: 120922
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.238A>G
  hgvsp: ENSP00000358566.1:p.Thr80Ala
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1420A>G
  hgvsp: ENSP00000407442.3:p.Thr474Ala
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1420A>G
  hgvsp: ENSP00000358574.4:p.Thr474Ala
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1420A>G
  hgvsp: ENSP00000358572.4:p.Thr474Ala
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.238A>G
  hgvsp: ENSP00000384960.1:p.Thr80Ala
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1420A>G
  hgvsp: ENSP00000358567.2:p.Thr474Ala
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1420A>G
  hgvsp: ENSP00000358571.1:p.Thr474Ala
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1420A>G
  hgvsp: ENSP00000358568.1:p.Thr474Ala
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.298A>G
  hgvsp: ENSP00000340956.4:p.Thr100Ala
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43715
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr474Ala
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-114499282-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499282
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499282
    reference: chr 1
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1441A>C
  hgvsp: ENSP00000407442.3:p.Met481Leu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.259A>C
  hgvsp: ENSP00000358566.1:p.Met87Leu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.319A>C
  hgvsp: ENSP00000340956.4:p.Met107Leu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1441A>C
  hgvsp: ENSP00000358568.1:p.Met481Leu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1441A>C
  hgvsp: ENSP00000358572.4:p.Met481Leu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1441A>C
  hgvsp: ENSP00000358574.4:p.Met481Leu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1441A>C
  hgvsp: ENSP00000358571.1:p.Met481Leu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1441A>C
  hgvsp: ENSP00000358567.2:p.Met481Leu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.259A>C
  hgvsp: ENSP00000384960.1:p.Met87Leu
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Met481Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ

1-114499284-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499284
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499284
    reference: chr 1
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.321G>C
  hgvsp: ENSP00000340956.4:p.Met107Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1443G>C
  hgvsp: ENSP00000358567.2:p.Met481Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1443G>C
  hgvsp: ENSP00000358574.4:p.Met481Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1443G>C
  hgvsp: ENSP00000407442.3:p.Met481Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.261G>C
  hgvsp: ENSP00000384960.1:p.Met87Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1443G>C
  hgvsp: ENSP00000358571.1:p.Met481Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1443G>C
  hgvsp: ENSP00000358568.1:p.Met481Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.261G>C
  hgvsp: ENSP00000358566.1:p.Met87Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1443G>C
  hgvsp: ENSP00000358572.4:p.Met481Ile
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met481Ile
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

1-114499304-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499304
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499304
    reference: chr 1
allele count: 3
allele frequency: 2.47255464345762e-5
allele num: 121332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.281G>A
  hgvsp: ENSP00000358566.1:p.Arg94Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1463G>A
  hgvsp: ENSP00000358568.1:p.Arg488Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1463G>A
  hgvsp: ENSP00000358572.4:p.Arg488Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.281G>A
  hgvsp: ENSP00000384960.1:p.Arg94Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1463G>A
  hgvsp: ENSP00000358571.1:p.Arg488Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1463G>A
  hgvsp: ENSP00000358567.2:p.Arg488Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1463G>A
  hgvsp: ENSP00000407442.3:p.Arg488Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1463G>A
  hgvsp: ENSP00000358574.4:p.Arg488Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.341G>A
  hgvsp: ENSP00000340956.4:p.Arg114Gln
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3028
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg488Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

1-114499318-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499318
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499318
    reference: chr 1
allele count: 2
allele frequency: 1.648152421135907e-5
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1477G>A
  hgvsp: ENSP00000358567.2:p.Asp493Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1477G>A
  hgvsp: ENSP00000358571.1:p.Asp493Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.295G>A
  hgvsp: ENSP00000384960.1:p.Asp99Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1477G>A
  hgvsp: ENSP00000407442.3:p.Asp493Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1477G>A
  hgvsp: ENSP00000358574.4:p.Asp493Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.355G>A
  hgvsp: ENSP00000340956.4:p.Asp119Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.295G>A
  hgvsp: ENSP00000358566.1:p.Asp99Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1477G>A
  hgvsp: ENSP00000358572.4:p.Asp493Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1477G>A
  hgvsp: ENSP00000358568.1:p.Asp493Asn
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3027
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp493Asn
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

1-114499319-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499319
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499319
    reference: chr 1
allele count: 2
allele frequency: 1.648098094798602e-5
allele num: 121352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.296A>G
  hgvsp: ENSP00000384960.1:p.Asp99Gly
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1478A>G
  hgvsp: ENSP00000407442.3:p.Asp493Gly
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1478A>G
  hgvsp: ENSP00000358567.2:p.Asp493Gly
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.296A>G
  hgvsp: ENSP00000358566.1:p.Asp99Gly
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.356A>G
  hgvsp: ENSP00000340956.4:p.Asp119Gly
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1478A>G
  hgvsp: ENSP00000358574.4:p.Asp493Gly
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1478A>G
  hgvsp: ENSP00000358571.1:p.Asp493Gly
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1478A>G
  hgvsp: ENSP00000358572.4:p.Asp493Gly
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1478A>G
  hgvsp: ENSP00000358568.1:p.Asp493Gly
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp493Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

1-114499326-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499326
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499326
    reference: chr 1
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.303A>G
  hgvsp: ENST00000369553.1:c.303A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1485A>G
  hgvsp: ENST00000369559.4:c.1485A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1485A>G
  hgvsp: ENST00000426820.2:c.1485A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.303A>G
  hgvsp: ENST00000406344.1:c.303A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1485A>G
  hgvsp: ENST00000369555.2:c.1485A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1485A>G
  hgvsp: ENST00000369554.2:c.1485A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1485A>G
  hgvsp: ENST00000369561.4:c.1485A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1485A>G
  hgvsp: ENST00000369558.1:c.1485A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.363A>G
  hgvsp: ENST00000340480.4:c.363A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu495Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

1-114499327-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499327
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499327
    reference: chr 1
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.304A>G
  hgvsp: ENSP00000384960.1:p.Lys102Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1486A>G
  hgvsp: ENSP00000358572.4:p.Lys496Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1486A>G
  hgvsp: ENSP00000358567.2:p.Lys496Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.364A>G
  hgvsp: ENSP00000340956.4:p.Lys122Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1486A>G
  hgvsp: ENSP00000358574.4:p.Lys496Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1486A>G
  hgvsp: ENSP00000358568.1:p.Lys496Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1486A>G
  hgvsp: ENSP00000358571.1:p.Lys496Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.304A>G
  hgvsp: ENSP00000358566.1:p.Lys102Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1486A>G
  hgvsp: ENSP00000407442.3:p.Lys496Glu
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3024
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys496Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-114499350-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499350
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499350
    reference: chr 1
allele count: 4
allele frequency: 3.295815961636702e-5
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.327A>C
  hgvsp: ENST00000369553.1:c.327A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1509A>C
  hgvsp: ENST00000369558.1:c.1509A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.327A>C
  hgvsp: ENST00000406344.1:c.327A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.387A>C
  hgvsp: ENST00000340480.4:c.387A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1509A>C
  hgvsp: ENST00000369559.4:c.1509A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1509A>C
  hgvsp: ENST00000369555.2:c.1509A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1509A>C
  hgvsp: ENST00000426820.2:c.1509A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1509A>C
  hgvsp: ENST00000369561.4:c.1509A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1509A>C
  hgvsp: ENST00000369554.2:c.1509A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala503Ala
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum

1-114499353-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499353
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499353
    reference: chr 1
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1512T>A
  hgvsp: ENSP00000358568.1:p.Asp504Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.330T>A
  hgvsp: ENSP00000384960.1:p.Asp110Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1512T>A
  hgvsp: ENSP00000407442.3:p.Asp504Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1512T>A
  hgvsp: ENSP00000358574.4:p.Asp504Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.390T>A
  hgvsp: ENSP00000340956.4:p.Asp130Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1512T>A
  hgvsp: ENSP00000358572.4:p.Asp504Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.330T>A
  hgvsp: ENSP00000358566.1:p.Asp110Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1512T>A
  hgvsp: ENSP00000358567.2:p.Asp504Glu
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1512T>A
  hgvsp: ENSP00000358571.1:p.Asp504Glu
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6932
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44062
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp504Glu
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-114499369-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499369
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499369
    reference: chr 1
allele count: 2
allele frequency: 1.647962294622699e-5
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1528C>A
  hgvsp: ENSP00000358572.4:p.Leu510Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1528C>A
  hgvsp: ENSP00000407442.3:p.Leu510Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.406C>A
  hgvsp: ENSP00000340956.4:p.Leu136Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1528C>A
  hgvsp: ENSP00000358574.4:p.Leu510Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1528C>A
  hgvsp: ENSP00000358567.2:p.Leu510Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.346C>A
  hgvsp: ENSP00000384960.1:p.Leu116Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.346C>A
  hgvsp: ENSP00000358566.1:p.Leu116Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1528C>A
  hgvsp: ENSP00000358571.1:p.Leu510Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1528C>A
  hgvsp: ENSP00000358568.1:p.Leu510Ile
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu510Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

1-114499376-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499376
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499376
    reference: chr 1
allele count: 2
allele frequency: 1.647880825258717e-5
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.413C>T
  hgvsp: ENSP00000340956.4:p.Thr138Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1535C>T
  hgvsp: ENSP00000358574.4:p.Thr512Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.353C>T
  hgvsp: ENSP00000358566.1:p.Thr118Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1535C>T
  hgvsp: ENSP00000407442.3:p.Thr512Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1535C>T
  hgvsp: ENSP00000358572.4:p.Thr512Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1535C>T
  hgvsp: ENSP00000358568.1:p.Thr512Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1535C>T
  hgvsp: ENSP00000358567.2:p.Thr512Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.353C>T
  hgvsp: ENSP00000384960.1:p.Thr118Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1535C>T
  hgvsp: ENSP00000358571.1:p.Thr512Ile
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr512Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-114499381-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499381
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499381
    reference: chr 1
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1540A>C
  hgvsp: ENSP00000358567.2:p.Asn514His
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.418A>C
  hgvsp: ENSP00000340956.4:p.Asn140His
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1540A>C
  hgvsp: ENSP00000407442.3:p.Asn514His
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1540A>C
  hgvsp: ENSP00000358571.1:p.Asn514His
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1540A>C
  hgvsp: ENSP00000358572.4:p.Asn514His
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.358A>C
  hgvsp: ENSP00000384960.1:p.Asn120His
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.358A>C
  hgvsp: ENSP00000358566.1:p.Asn120His
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1540A>C
  hgvsp: ENSP00000358568.1:p.Asn514His
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1540A>C
  hgvsp: ENSP00000358574.4:p.Asn514His
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44159
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn514His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

1-114499382-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499382
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499382
    reference: chr 1
allele count: 5
allele frequency: 4.119837843182493e-5
allele num: 121364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1541A>G
  hgvsp: ENSP00000358572.4:p.Asn514Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1541A>G
  hgvsp: ENSP00000358567.2:p.Asn514Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1541A>G
  hgvsp: ENSP00000358571.1:p.Asn514Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.359A>G
  hgvsp: ENSP00000384960.1:p.Asn120Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.419A>G
  hgvsp: ENSP00000340956.4:p.Asn140Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1541A>G
  hgvsp: ENSP00000358574.4:p.Asn514Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1541A>G
  hgvsp: ENSP00000407442.3:p.Asn514Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1541A>G
  hgvsp: ENSP00000358568.1:p.Asn514Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.359A>G
  hgvsp: ENSP00000358566.1:p.Asn120Ser
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3025
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn514Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

1-114499399-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499399
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499399
    reference: chr 1
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.376A>G
  hgvsp: ENSP00000384960.1:p.Met126Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.376A>G
  hgvsp: ENSP00000358566.1:p.Met126Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1558A>G
  hgvsp: ENSP00000407442.3:p.Met520Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1558A>G
  hgvsp: ENSP00000358574.4:p.Met520Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1558A>G
  hgvsp: ENSP00000358568.1:p.Met520Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.436A>G
  hgvsp: ENSP00000340956.4:p.Met146Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1558A>G
  hgvsp: ENSP00000358572.4:p.Met520Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1558A>G
  hgvsp: ENSP00000358567.2:p.Met520Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1558A>G
  hgvsp: ENSP00000358571.1:p.Met520Val
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16122
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met520Val
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

1-114499410-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499410
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499410
    reference: chr 1
allele count: 2
allele frequency: 1.648451280022419e-5
allele num: 121326
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1569T>G
  hgvsp: ENST00000369558.1:c.1569T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1569T>G
  hgvsp: ENST00000426820.2:c.1569T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1569T>G
  hgvsp: ENST00000369555.2:c.1569T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.447T>G
  hgvsp: ENST00000340480.4:c.447T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1569T>G
  hgvsp: ENST00000369554.2:c.1569T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.387T>G
  hgvsp: ENST00000406344.1:c.387T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1569T>G
  hgvsp: ENST00000369559.4:c.1569T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1569T>G
  hgvsp: ENST00000369561.4:c.1569T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.387T>G
  hgvsp: ENST00000369553.1:c.387T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16120
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu523Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ

1-114499428-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499428
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499428
    reference: chr 1
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.405C>G
  hgvsp: ENSP00000358566.1:p.Ser135Arg
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1587C>G
  hgvsp: ENSP00000407442.3:p.Ser529Arg
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1587C>G
  hgvsp: ENSP00000358567.2:p.Ser529Arg
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1587C>G
  hgvsp: ENSP00000358568.1:p.Ser529Arg
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1587C>G
  hgvsp: ENSP00000358571.1:p.Ser529Arg
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1587C>G
  hgvsp: ENSP00000358574.4:p.Ser529Arg
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1587C>G
  hgvsp: ENSP00000358572.4:p.Ser529Arg
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.405C>G
  hgvsp: ENSP00000384960.1:p.Ser135Arg
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.465C>G
  hgvsp: ENSP00000340956.4:p.Ser155Arg
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser529Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

1-114499430-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499430
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499430
    reference: chr 1
allele count: 2
allele frequency: 1.650464605786529e-5
allele num: 121178
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1589A>G
  hgvsp: ENSP00000358574.4:p.Asn530Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1589A>G
  hgvsp: ENSP00000358572.4:p.Asn530Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1589A>G
  hgvsp: ENSP00000358571.1:p.Asn530Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.467A>G
  hgvsp: ENSP00000340956.4:p.Asn156Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1589A>G
  hgvsp: ENSP00000358567.2:p.Asn530Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1589A>G
  hgvsp: ENSP00000407442.3:p.Asn530Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.407A>G
  hgvsp: ENSP00000384960.1:p.Asn136Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.407A>G
  hgvsp: ENSP00000358566.1:p.Asn136Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1589A>G
  hgvsp: ENSP00000358568.1:p.Asn530Ser
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43977
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn530Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD

1-114499442-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499442
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499442
    reference: chr 1
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.470+9G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1592+9G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1592+9G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1592+9G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1592+9G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1592+9G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1592+9G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.410+9G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.410+9G>A
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43745
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

1-114499446-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499446
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499446
    reference: chr 1
allele count: 2
allele frequency: 1.653001851362074e-5
allele num: 120992
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1592+13T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1592+13T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.470+13T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1592+13T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1592+13T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1592+13T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.410+13T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1592+13T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.410+13T>C
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

1-114499446-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499446
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499446
    reference: chr 1
allele count: 1
allele frequency: 8.265009256810368e-6
allele num: 120992
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1592+13T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.410+13T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1592+13T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1592+13T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.470+13T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1592+13T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1592+13T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1592+13T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.410+13T>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43705
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

1-114499447-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499447
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499447
    reference: chr 1
allele count: 1
allele frequency: 8.266102367411717e-6
allele num: 120976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1592+14A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1592+14A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1592+14A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1592+14A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1592+14A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.410+14A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1592+14A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.470+14A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.410+14A>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16009
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

1-114499452-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499452
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499452
    reference: chr 1
allele count: 1
allele frequency: 8.274446853227862e-6
allele num: 120854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1592+19G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.410+19G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.410+19G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.470+19G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1592+19G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1592+19G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1592+19G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1592+19G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1592+19G>A
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6853
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43381
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

1-114499464-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499464
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499464
    reference: chr 1
allele count: 8
allele frequency: 6.636580833554553e-5
allele num: 120544
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1592+31A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1592+31A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1592+31A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.470+31A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1592+31A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1592+31A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1592+31A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.410+31A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.410+31A>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1890
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-114499474-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499474
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499474
    reference: chr 1
allele count: 1
allele frequency: 8.315731701232391e-6
allele num: 120254
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1592+41T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.410+41T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1592+41T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.410+41T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1592+41T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.470+41T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1592+41T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1592+41T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1592+41T>C
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14093
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2494
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

1-114499485-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499485
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499485
    reference: chr 1
allele count: 10
allele frequency: 8.424315945545222e-5
allele num: 118704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1592+52C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1592+52C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.410+52C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.470+52C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1592+52C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.410+52C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1592+52C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1592+52C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1592+52C>T
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14556
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23355
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7915
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2062
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5011
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-114499697-CTGTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499697
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499693
    reference: chr 1
allele count: 2
allele frequency: 1.686198465559396e-5
allele num: 118610
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1593-47_1593-44delGTTT
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1593-47_1593-44delGTTT
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1593-47_1593-44delGTTT
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1593-47_1593-44delGTTT
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1593-47_1593-44delGTTT
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.411-47_411-44delGTTT
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1593-47_1593-44delGTTT
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.471-47_471-44delGTTT
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.411-47_411-44delGTTT
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34983
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: CTGTT
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

1-114499698-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499698
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499698
    reference: chr 1
allele count: 4
allele frequency: 3.369385760975774e-5
allele num: 118716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1593-48T>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1593-48T>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.471-48T>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1593-48T>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.411-48T>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.411-48T>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1593-48T>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1593-48T>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1593-48T>A
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15625
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24286
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

1-114499698-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499698
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499698
    reference: chr 1
allele count: 4
allele frequency: 3.369385760975774e-5
allele num: 118716
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1593-48T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1593-48T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1593-48T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1593-48T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.411-48T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1593-48T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1593-48T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.471-48T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.411-48T>C
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-114499707-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499707
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499707
    reference: chr 1
allele count: 1
allele frequency: 8.420059950826851e-6
allele num: 118764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1593-39C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.411-39C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1593-39C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1593-39C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.471-39C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.411-39C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1593-39C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1593-39C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1593-39C>A
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39294
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-114499719-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499719
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499719
    reference: chr 1
allele count: 9
allele frequency: 7.533524182612626e-5
allele num: 119466
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.471-27T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1593-27T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1593-27T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.411-27T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1593-27T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1593-27T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.411-27T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1593-27T>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1593-27T>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25384
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19859
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6444
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-114499723-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499723
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499723
    reference: chr 1
allele count: 1
allele frequency: 8.357570287166115e-6
allele num: 119652
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1593-23T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1593-23T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.471-23T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1593-23T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1593-23T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1593-23T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.411-23T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.411-23T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1593-23T>C
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/1-114499735-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499735
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499735
    reference: chr 1
allele count: 1
allele frequency: 8.305371914554334e-6
allele num: 120404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1593-11C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.411-11C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1593-11C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1593-11C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1593-11C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1593-11C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.471-11C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1593-11C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.411-11C>A
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

1-114499752-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499752
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499752
    reference: chr 1
allele count: 2
allele frequency: 1.651118632873772e-5
allele num: 121130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1599G>A
  hgvsp: ENST00000369555.2:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1599G>A
  hgvsp: ENST00000426820.2:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1599G>A
  hgvsp: ENST00000369561.4:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1599G>A
  hgvsp: ENST00000369558.1:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.417G>A
  hgvsp: ENST00000369553.1:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1599G>A
  hgvsp: ENST00000369554.2:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.477G>A
  hgvsp: ENST00000340480.4:c.477G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1599G>A
  hgvsp: ENST00000369559.4:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.417G>A
  hgvsp: ENST00000406344.1:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4409
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Lys533Lys
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

1-114499768-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499768
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499768
    reference: chr 1
allele count: 2
allele frequency: 1.648532805802836e-5
allele num: 121320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1615A>G
  hgvsp: ENSP00000407442.3:p.Met539Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1615A>G
  hgvsp: ENSP00000358567.2:p.Met539Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.433A>G
  hgvsp: ENSP00000358566.1:p.Met145Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1615A>G
  hgvsp: ENSP00000358571.1:p.Met539Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1615A>G
  hgvsp: ENSP00000358574.4:p.Met539Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1615A>G
  hgvsp: ENSP00000358572.4:p.Met539Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.493A>G
  hgvsp: ENSP00000340956.4:p.Met165Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.433A>G
  hgvsp: ENSP00000384960.1:p.Met145Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1615A>G
  hgvsp: ENSP00000358568.1:p.Met539Val
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met539Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

1-114499783-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499783
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499783
    reference: chr 1
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1630C>T
  hgvsp: ENSP00000358572.4:p.Arg544Trp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.508C>T
  hgvsp: ENSP00000340956.4:p.Arg170Trp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1630C>T
  hgvsp: ENSP00000358568.1:p.Arg544Trp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.448C>T
  hgvsp: ENSP00000358566.1:p.Arg150Trp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1630C>T
  hgvsp: ENSP00000407442.3:p.Arg544Trp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1630C>T
  hgvsp: ENSP00000358571.1:p.Arg544Trp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1630C>T
  hgvsp: ENSP00000358567.2:p.Arg544Trp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1630C>T
  hgvsp: ENSP00000358574.4:p.Arg544Trp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.448C>T
  hgvsp: ENSP00000384960.1:p.Arg150Trp
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg544Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

1-114499784-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499784
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499784
    reference: chr 1
allele count: 3
allele frequency: 2.471943441934048e-5
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1631G>A
  hgvsp: ENSP00000358572.4:p.Arg544Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1631G>A
  hgvsp: ENSP00000358568.1:p.Arg544Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.449G>A
  hgvsp: ENSP00000384960.1:p.Arg150Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1631G>A
  hgvsp: ENSP00000407442.3:p.Arg544Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1631G>A
  hgvsp: ENSP00000358574.4:p.Arg544Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.509G>A
  hgvsp: ENSP00000340956.4:p.Arg170Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1631G>A
  hgvsp: ENSP00000358571.1:p.Arg544Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1631G>A
  hgvsp: ENSP00000358567.2:p.Arg544Gln
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.449G>A
  hgvsp: ENSP00000358566.1:p.Arg150Gln
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg544Gln
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

1-114499792-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499792
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499792
    reference: chr 1
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.517C>T
  hgvsp: ENSP00000340956.4:p.His173Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1639C>T
  hgvsp: ENSP00000407442.3:p.His547Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1639C>T
  hgvsp: ENSP00000358574.4:p.His547Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1639C>T
  hgvsp: ENSP00000358567.2:p.His547Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.457C>T
  hgvsp: ENSP00000358566.1:p.His153Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.457C>T
  hgvsp: ENSP00000384960.1:p.His153Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1639C>T
  hgvsp: ENSP00000358571.1:p.His547Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1639C>T
  hgvsp: ENSP00000358572.4:p.His547Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1639C>T
  hgvsp: ENSP00000358568.1:p.His547Tyr
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4408
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His547Tyr
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-114499796-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499796
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499796
    reference: chr 1
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1643T>C
  hgvsp: ENSP00000358574.4:p.Met548Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1643T>C
  hgvsp: ENSP00000358571.1:p.Met548Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1643T>C
  hgvsp: ENSP00000407442.3:p.Met548Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1643T>C
  hgvsp: ENSP00000358572.4:p.Met548Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.461T>C
  hgvsp: ENSP00000384960.1:p.Met154Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.521T>C
  hgvsp: ENSP00000340956.4:p.Met174Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1643T>C
  hgvsp: ENSP00000358568.1:p.Met548Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1643T>C
  hgvsp: ENSP00000358567.2:p.Met548Thr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.461T>C
  hgvsp: ENSP00000358566.1:p.Met154Thr
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21968
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met548Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

1-114499796-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499796
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499796
    reference: chr 1
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1643T>A
  hgvsp: ENSP00000358567.2:p.Met548Lys
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.521T>A
  hgvsp: ENSP00000340956.4:p.Met174Lys
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1643T>A
  hgvsp: ENSP00000358568.1:p.Met548Lys
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1643T>A
  hgvsp: ENSP00000358572.4:p.Met548Lys
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.461T>A
  hgvsp: ENSP00000384960.1:p.Met154Lys
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1643T>A
  hgvsp: ENSP00000358571.1:p.Met548Lys
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1643T>A
  hgvsp: ENSP00000407442.3:p.Met548Lys
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1643T>A
  hgvsp: ENSP00000358574.4:p.Met548Lys
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.461T>A
  hgvsp: ENSP00000358566.1:p.Met154Lys
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6051
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45950
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met548Lys
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

1-114499797-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499797
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499797
    reference: chr 1
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1644G>A
  hgvsp: ENSP00000358568.1:p.Met548Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1644G>A
  hgvsp: ENSP00000358574.4:p.Met548Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.522G>A
  hgvsp: ENSP00000340956.4:p.Met174Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.462G>A
  hgvsp: ENSP00000384960.1:p.Met154Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1644G>A
  hgvsp: ENSP00000358567.2:p.Met548Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1644G>A
  hgvsp: ENSP00000358572.4:p.Met548Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1644G>A
  hgvsp: ENSP00000407442.3:p.Met548Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1644G>A
  hgvsp: ENSP00000358571.1:p.Met548Ile
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.462G>A
  hgvsp: ENSP00000358566.1:p.Met154Ile
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met548Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-114499802-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499802
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499802
    reference: chr 1
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1649A>T
  hgvsp: ENSP00000358571.1:p.Asp550Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1649A>T
  hgvsp: ENSP00000358572.4:p.Asp550Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.467A>T
  hgvsp: ENSP00000358566.1:p.Asp156Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1649A>T
  hgvsp: ENSP00000358568.1:p.Asp550Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1649A>T
  hgvsp: ENSP00000358567.2:p.Asp550Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1649A>T
  hgvsp: ENSP00000407442.3:p.Asp550Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1649A>T
  hgvsp: ENSP00000358574.4:p.Asp550Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.527A>T
  hgvsp: ENSP00000340956.4:p.Asp176Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.467A>T
  hgvsp: ENSP00000384960.1:p.Asp156Val
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp550Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

1-114499827-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499827
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499827
    reference: chr 1
allele count: 4
allele frequency: 3.295707341188102e-5
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1674C>G
  hgvsp: ENST00000369554.2:c.1674C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1674C>G
  hgvsp: ENST00000426820.2:c.1674C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+21C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.492C>G
  hgvsp: ENST00000369553.1:c.492C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1674C>G
  hgvsp: ENST00000369559.4:c.1674C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.492C>G
  hgvsp: ENST00000406344.1:c.492C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1674C>G
  hgvsp: ENST00000369558.1:c.1674C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1674C>G
  hgvsp: ENST00000369555.2:c.1674C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.552C>G
  hgvsp: ENST00000340480.4:c.552C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4408
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro558Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

1-114499827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499827
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499827
    reference: chr 1
allele count: 3
allele frequency: 2.471780505891077e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1674C>T
  hgvsp: ENST00000369554.2:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.492C>T
  hgvsp: ENST00000369553.1:c.492C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1674C>T
  hgvsp: ENST00000426820.2:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1674C>T
  hgvsp: ENST00000369559.4:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1674C>T
  hgvsp: ENST00000369555.2:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+21C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.492C>T
  hgvsp: ENST00000406344.1:c.492C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.552C>T
  hgvsp: ENST00000340480.4:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1674C>T
  hgvsp: ENST00000369558.1:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro558Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

1-114499836-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499836
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499836
    reference: chr 1
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1683A>G
  hgvsp: ENST00000369559.4:c.1683A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1683A>G
  hgvsp: ENST00000369554.2:c.1683A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+30A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.501A>G
  hgvsp: ENST00000406344.1:c.501A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1683A>G
  hgvsp: ENST00000369558.1:c.1683A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.501A>G
  hgvsp: ENST00000369553.1:c.501A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1683A>G
  hgvsp: ENST00000426820.2:c.1683A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.561A>G
  hgvsp: ENST00000340480.4:c.561A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1683A>G
  hgvsp: ENST00000369555.2:c.1683A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45953
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr561Thr
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-114499861-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499861
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499861
    reference: chr 1
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1708A>G
  hgvsp: ENSP00000358572.4:p.Asn570Asp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1708A>G
  hgvsp: ENSP00000358567.2:p.Asn570Asp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.526A>G
  hgvsp: ENSP00000384960.1:p.Asn176Asp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.526A>G
  hgvsp: ENSP00000358566.1:p.Asn176Asp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1708A>G
  hgvsp: ENSP00000358568.1:p.Asn570Asp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.586A>G
  hgvsp: ENSP00000340956.4:p.Asn196Asp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+55A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1708A>G
  hgvsp: ENSP00000407442.3:p.Asn570Asp
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1708A>G
  hgvsp: ENSP00000358571.1:p.Asn570Asp
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn570Asp
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

1-114499870-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499870
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499870
    reference: chr 1
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1717A>G
  hgvsp: ENSP00000358568.1:p.Met573Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1717A>G
  hgvsp: ENSP00000407442.3:p.Met573Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.535A>G
  hgvsp: ENSP00000358566.1:p.Met179Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1717A>G
  hgvsp: ENSP00000358572.4:p.Met573Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+64A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1717A>G
  hgvsp: ENSP00000358571.1:p.Met573Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.595A>G
  hgvsp: ENSP00000340956.4:p.Met199Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.535A>G
  hgvsp: ENSP00000384960.1:p.Met179Val
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1717A>G
  hgvsp: ENSP00000358567.2:p.Met573Val
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Met573Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD

1-114499874-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499874
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499874
    reference: chr 1
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1721G>A
  hgvsp: ENSP00000358572.4:p.Ser574Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1721G>A
  hgvsp: ENSP00000358568.1:p.Ser574Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.599G>A
  hgvsp: ENSP00000340956.4:p.Ser200Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1721G>A
  hgvsp: ENSP00000358567.2:p.Ser574Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1721G>A
  hgvsp: ENSP00000358571.1:p.Ser574Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1721G>A
  hgvsp: ENSP00000407442.3:p.Ser574Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.539G>A
  hgvsp: ENSP00000384960.1:p.Ser180Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.539G>A
  hgvsp: ENSP00000358566.1:p.Ser180Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+68G>A
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser574Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-114499880-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499880
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499880
    reference: chr 1
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1727G>A
  hgvsp: ENSP00000358572.4:p.Ser576Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.545G>A
  hgvsp: ENSP00000384960.1:p.Ser182Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1727G>A
  hgvsp: ENSP00000358571.1:p.Ser576Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.605G>A
  hgvsp: ENSP00000340956.4:p.Ser202Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+74G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.545G>A
  hgvsp: ENSP00000358566.1:p.Ser182Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1727G>A
  hgvsp: ENSP00000358567.2:p.Ser576Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1727G>A
  hgvsp: ENSP00000407442.3:p.Ser576Asn
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1727G>A
  hgvsp: ENSP00000358568.1:p.Ser576Asn
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4396
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser576Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-114499881-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499881
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499881
    reference: chr 1
allele count: 3
allele frequency: 2.478355693609147e-5
allele num: 121048
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.546C>T
  hgvsp: ENST00000406344.1:c.546C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1728C>T
  hgvsp: ENST00000369554.2:c.1728C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.606C>T
  hgvsp: ENST00000340480.4:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.546C>T
  hgvsp: ENST00000369553.1:c.546C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1728C>T
  hgvsp: ENST00000369559.4:c.1728C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1728C>T
  hgvsp: ENST00000426820.2:c.1728C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1728C>T
  hgvsp: ENST00000369558.1:c.1728C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+75C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1728C>T
  hgvsp: ENST00000369555.2:c.1728C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser576Ser
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

1-114499883-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499883
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499883
    reference: chr 1
allele count: 5
allele frequency: 4.130319851969337e-5
allele num: 121056
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.608A>G
  hgvsp: ENSP00000340956.4:p.Asn203Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.548A>G
  hgvsp: ENSP00000384960.1:p.Asn183Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1730A>G
  hgvsp: ENSP00000358568.1:p.Asn577Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1730A>G
  hgvsp: ENSP00000358572.4:p.Asn577Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1730A>G
  hgvsp: ENSP00000358571.1:p.Asn577Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.548A>G
  hgvsp: ENSP00000358566.1:p.Asn183Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1730A>G
  hgvsp: ENSP00000407442.3:p.Asn577Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1730A>G
  hgvsp: ENSP00000358567.2:p.Asn577Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+77A>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6527
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn577Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-114499890-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499890
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499890
    reference: chr 1
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.615C>A
  hgvsp: ENST00000340480.4:c.615C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1737C>A
  hgvsp: ENST00000369554.2:c.1737C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1737C>A
  hgvsp: ENST00000369558.1:c.1737C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.555C>A
  hgvsp: ENST00000406344.1:c.555C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1737C>A
  hgvsp: ENST00000369555.2:c.1737C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.555C>A
  hgvsp: ENST00000369553.1:c.555C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1737C>A
  hgvsp: ENST00000426820.2:c.1737C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+84C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1737C>A
  hgvsp: ENST00000369559.4:c.1737C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu579Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

1-114499890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499890
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499890
    reference: chr 1
allele count: 6
allele frequency: 4.969520275642725e-5
allele num: 120736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1737C>T
  hgvsp: ENST00000369559.4:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+84C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1737C>T
  hgvsp: ENST00000369555.2:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1737C>T
  hgvsp: ENST00000426820.2:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.555C>T
  hgvsp: ENST00000369553.1:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1737C>T
  hgvsp: ENST00000369554.2:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.555C>T
  hgvsp: ENST00000406344.1:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1737C>T
  hgvsp: ENST00000369558.1:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.615C>T
  hgvsp: ENST00000340480.4:c.615C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu579Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

1-114499892-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499892
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499892
    reference: chr 1
allele count: 45
allele frequency: 3.726954994947906e-4
allele num: 120742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1739A>G
  hgvsp: ENSP00000358568.1:p.Asn580Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1739A>G
  hgvsp: ENSP00000358567.2:p.Asn580Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+86A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.617A>G
  hgvsp: ENSP00000340956.4:p.Asn206Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1739A>G
  hgvsp: ENSP00000407442.3:p.Asn580Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1739A>G
  hgvsp: ENSP00000358572.4:p.Asn580Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.557A>G
  hgvsp: ENSP00000358566.1:p.Asn186Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.557A>G
  hgvsp: ENSP00000384960.1:p.Asn186Ser
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1739A>G
  hgvsp: ENSP00000358571.1:p.Asn580Ser
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21251
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26296
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn580Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

1-114499896-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499896
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499896
    reference: chr 1
allele count: 6
allele frequency: 4.981154631643615e-5
allele num: 120454
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.621A>G
  hgvsp: ENST00000340480.4:c.621A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1743A>G
  hgvsp: ENST00000369554.2:c.1743A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1743A>G
  hgvsp: ENST00000369555.2:c.1743A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1743A>G
  hgvsp: ENST00000369559.4:c.1743A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1743A>G
  hgvsp: ENST00000369558.1:c.1743A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1743A>G
  hgvsp: ENST00000426820.2:c.1743A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+90A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.561A>G
  hgvsp: ENST00000369553.1:c.561A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.561A>G
  hgvsp: ENST00000406344.1:c.561A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5833
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr581Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

1-114499903-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499903
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499903
    reference: chr 1
allele count: 1
allele frequency: 8.376752835530836e-6
allele num: 119378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.568A>T
  hgvsp: ENSP00000358566.1:p.Asn190Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1750A>T
  hgvsp: ENSP00000358572.4:p.Asn584Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.628A>T
  hgvsp: ENSP00000340956.4:p.Asn210Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1750A>T
  hgvsp: ENSP00000358567.2:p.Asn584Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+97A>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1750A>T
  hgvsp: ENSP00000407442.3:p.Asn584Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1750A>T
  hgvsp: ENSP00000358568.1:p.Asn584Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1750A>T
  hgvsp: ENSP00000358571.1:p.Asn584Tyr
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.568A>T
  hgvsp: ENSP00000384960.1:p.Asn190Tyr
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4383
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asn584Tyr
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ

1-114499950-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114499950
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114499949
    reference: chr 1
allele count: 21
allele frequency: 1.945453197954495e-4
allele num: 107944
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1755+43delA
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1653+145delA
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1755+43delA
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.573+43delA
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.633+43delA
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1755+43delA
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1755+43delA
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1755+43delA
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.573+43delA
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17696
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16851
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7353
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: TA
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

1-114500641-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500641
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500641
    reference: chr 1
allele count: 6
allele frequency: 5.033472592741732e-5
allele num: 119202
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-47T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-47T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-47T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-47T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-47T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-47T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-47T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-47T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-47T>C
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4982
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20770
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22361
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5639
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-114500642-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500642
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500642
    reference: chr 1
allele count: 1
allele frequency: 8.400537634408602e-6
allele num: 119040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-46G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-46G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-46G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-46G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-46G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-46G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-46G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-46G>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-46G>A
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22450
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1450
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

1-114500644-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500644
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500644
    reference: chr 1
allele count: 1
allele frequency: 8.384338056510439e-6
allele num: 119270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-44C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-44C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-44C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-44C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-44C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-44C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-44C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-44C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-44C>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS

1-114500644-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500644
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500644
    reference: chr 1
allele count: 2
allele frequency: 1.676867611302088e-5
allele num: 119270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-44C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-44C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-44C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-44C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-44C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-44C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-44C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-44C>T
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-44C>T
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5615
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

1-114500646-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500646
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500646
    reference: chr 1
allele count: 1
allele frequency: 8.377173876620983e-6
allele num: 119372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-42C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-42C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-42C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-42C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-42C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-42C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-42C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-42C>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-42C>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22993
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

1-114500655-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500655
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500655
    reference: chr 1
allele count: 4
allele frequency: 3.338730948366526e-5
allele num: 119806
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-33A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-33A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-33A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-33A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-33A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-33A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-33A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-33A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-33A>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24004
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

1-114500666-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500666
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500666
    reference: chr 1
allele count: 2
allele frequency: 1.657605092162843e-5
allele num: 120656
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-22A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-22A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-22A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-22A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-22A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-22A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-22A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-22A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-22A>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5905
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49272
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

1-114500669-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500669
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500669
    reference: chr 1
allele count: 1
allele frequency: 8.278693953241936e-6
allele num: 120792
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-19A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-19A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-19A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-19A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-19A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-19A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-19A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-19A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-19A>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff

1-114500671-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500671
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500671
    reference: chr 1
allele count: 1
allele frequency: 8.273214640280627e-6
allele num: 120872
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-17A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-17A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-17A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-17A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-17A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-17A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-17A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-17A>G
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-17A>G
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5917
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-114500674-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500674
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500674
    reference: chr 1
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-14C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-14C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-14C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-14C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-14C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-14C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-14C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-14C>A
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-14C>A
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5925
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

1-114500685-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114500685
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 114500685
    reference: chr 1
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000340956
  ensembl transcript: ENST00000340480
  gene symbol: HIPK1
  hgvsc: ENST00000340480.4:c.634-3T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358568
  ensembl transcript: ENST00000369555
  gene symbol: HIPK1
  hgvsc: ENST00000369555.2:c.1756-3T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358567
  ensembl transcript: ENST00000369554
  gene symbol: HIPK1
  hgvsc: ENST00000369554.2:c.1756-3T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358574
  ensembl transcript: ENST00000369561
  gene symbol: HIPK1
  hgvsc: ENST00000369561.4:c.1654-3T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358572
  ensembl transcript: ENST00000369559
  gene symbol: HIPK1
  hgvsc: ENST00000369559.4:c.1756-3T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000407442
  ensembl transcript: ENST00000426820
  gene symbol: HIPK1
  hgvsc: ENST00000426820.2:c.1756-3T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358566
  ensembl transcript: ENST00000369553
  gene symbol: HIPK1
  hgvsc: ENST00000369553.1:c.574-3T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000358571
  ensembl transcript: ENST00000369558
  gene symbol: HIPK1
  hgvsc: ENST00000369558.1:c.1756-3T>C
  variant of: http://identifiers.org/hgnc/19006
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163349
  ensembl protein: ENSP00000384960
  ensembl transcript: ENST00000406344
  gene symbol: HIPK1
  hgvsc: ENST00000406344.1:c.574-3T>C
  variant of: http://identifiers.org/hgnc/19006
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
hgvs: c.1756-3T>C
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2127
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43518
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6897
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.597676e6

MQRankSum
type: SiteQuality
SIO_000300: -4.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

QD
type: SiteQuality
SIO_000300: 1.513e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.88e-2

MQ
type: SiteQuality
SIO_000300: 5.93e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.595e0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1920
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43570
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6891
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507477086348288e-5
allele num: 66336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.85e0

VQSLOD
type: SiteQuality
SIO_000300: -1.623e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e0

QD
type: SiteQuality
SIO_000300: 1.349e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

DP
type: SiteQuality
SIO_000300: 1.598265e6

MQ
type: SiteQuality
SIO_000300: 5.752e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

GenotypeQuality
all individuals: 2142
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6907
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3026
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.062215477996965e-3
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.601846e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

QD
type: SiteQuality
SIO_000300: 1.346e1

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-2

MQ
type: SiteQuality
SIO_000300: 5.937e1

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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African
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allele num: 10388
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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QD
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ClippingRankSum
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DP
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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European (Finnish)
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South Asian
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ClippingRankSum
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DP
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66692
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African
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Latino
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South Asian
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Other
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European (Finnish)
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East Asian
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FS
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VQSLOD
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DP
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QD
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BaseQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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South Asian
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
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FS
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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Other
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European (Finnish)
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European (Non-Finnish)
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African
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InbreedingCoeff
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ClippingRankSum
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QD
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MQ
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BaseQRankSum
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ReadPosRankSum
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FS
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DP
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Other
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South Asian
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East Asian
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Latino
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African
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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MQ
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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Latino
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European (Non-Finnish)
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Other
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MQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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QD
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ReadPosRankSum
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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South Asian
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East Asian
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European (Finnish)
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InbreedingCoeff
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QD
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQ
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DP
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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South Asian
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East Asian
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allele frequency: 0.0e0
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African
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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FS
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MQ
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QD
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ClippingRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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European (Non-Finnish)
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Latino
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South Asian
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MQ
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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QD
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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European (Non-Finnish)
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Other
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African
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East Asian
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South Asian
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MQRankSum
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DP
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QD
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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Other
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African
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South Asian
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BaseQRankSum
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MQ
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VQSLOD
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DP
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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Other
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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allele frequency: 2.997422216893472e-5
allele num: 66724
num of homozygotes: 0

MQ
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InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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East Asian
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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ClippingRankSum
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SIO_000300: 4.18e-1

VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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FS
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QD
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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Other
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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ClippingRankSum
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DP
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FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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European (Finnish)
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African
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East Asian
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Other
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South Asian
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ClippingRankSum
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VQSLOD
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FS
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MQ
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BaseQRankSum
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QD
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DP
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e0

DP
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MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.26e-1

ReadPosRankSum
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SIO_000300: -2.41e-1

FS
type: SiteQuality
SIO_000300: 2.905e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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SIO_000300: 1.369e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.514233797698365e-4
allele num: 6604
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.604172e6

QD
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ClippingRankSum
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SIO_000300: 1.34e0

MQRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQ
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 9.07e-1

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 1.956564273136372e-4
allele num: 10222
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.52e-1

MQ
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SIO_000300: 5.975e1

MQRankSum
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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FS
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VQSLOD
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ClippingRankSum
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SIO_000300: -2.91e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

South Asian
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allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -2.91e-1

VQSLOD
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DP
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 904
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.409999999999999e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -7.022e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

DP
type: SiteQuality
SIO_000300: 1.602587e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele num: 900
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African
type: Population
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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MQ
type: SiteQuality
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VQSLOD
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QD
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66362
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Other
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African
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South Asian
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allele frequency: 4.248604030104394e-4
allele num: 16476
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Latino
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East Asian
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InbreedingCoeff
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MQ
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QD
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Latino
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East Asian
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African
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Other
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European (Non-Finnish)
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ReadPosRankSum
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FS
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ClippingRankSum
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DP
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MQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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South Asian
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East Asian
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European (Non-Finnish)
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Latino
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Other
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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MQ
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QD
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FS
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4416
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1448
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.956564273136372e-4
allele num: 10222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15022
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.519e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.932e0

DP
type: SiteQuality
SIO_000300: 1.717246e6

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 4.066e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.126e1

GenotypeQuality
all individuals: 817
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4418
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35866
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.0790273556231e-5
allele num: 65800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15090
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.079e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

QD
type: SiteQuality
SIO_000300: 1.189e1

FS
type: SiteQuality
SIO_000300: 8.8e-1

DP
type: SiteQuality
SIO_000300: 1.718355e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1145
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 865
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.644681839294008e-4
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15090
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

QD
type: SiteQuality
SIO_000300: 1.189e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.079e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.11e-1

DP
type: SiteQuality
SIO_000300: 1.718355e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

GenotypeQuality
all individuals: 585
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
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variant carriers: 0

GenotypeQuality
all individuals: 5846
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4412
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.771350400625366e-5
allele num: 10234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15118
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.623e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e-1

DP
type: SiteQuality
SIO_000300: 1.73313e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

QD
type: SiteQuality
SIO_000300: 1.322e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
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variant carriers: 0

GenotypeQuality
all individuals: 554
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5896
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variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4418
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42554
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variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.842638275772526e-4
allele num: 15404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.66e-1

FS
type: SiteQuality
SIO_000300: 8.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e0

MQRankSum
type: SiteQuality
SIO_000300: -2.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.759427e6

QD
type: SiteQuality
SIO_000300: 1.417e1

GenotypeQuality
all individuals: 5922
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
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variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4410
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.766546e6

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

QD
type: SiteQuality
SIO_000300: 1.482e1

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1339
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 1360
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variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
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GenotypeQuality
all individuals: 4409
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 792
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44764
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5975
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506477854775535e-5
allele num: 66380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15968
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.25e-1

FS
type: SiteQuality
SIO_000300: 5.679e0

DP
type: SiteQuality
SIO_000300: 1.783431e6

VQSLOD
type: SiteQuality
SIO_000300: 8.139999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.982e0

QD
type: SiteQuality
SIO_000300: 1.29e1

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 446
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 6030
bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 1370
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GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.218620521569583e-4
allele num: 16412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.084e0

FS
type: SiteQuality
SIO_000300: 1.472e0

QD
type: SiteQuality
SIO_000300: 1.116e1

DP
type: SiteQuality
SIO_000300: 1.795005e6

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 6034
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
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GenotypeQuality
all individuals: 45893
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4409
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.42e-1

QD
type: SiteQuality
SIO_000300: 9.59e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 5.843e0

DP
type: SiteQuality
SIO_000300: 1.797459e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.22e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
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allele count: 0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: -8.4e-1

BaseQRankSum
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SIO_000300: -1.296e0

ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

FS
type: SiteQuality
SIO_000300: 1.282e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
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allele frequency: 2.998590662388677e-5
allele num: 66698
num of homozygotes: 0

Latino
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allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.798193e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

FS
type: SiteQuality
SIO_000300: 2.282e0

BaseQRankSum
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SIO_000300: 8.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele num: 11570
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.798041e6

QD
type: SiteQuality
SIO_000300: 1.056e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.928e1

MQRankSum
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SIO_000300: -1.085e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.821e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.25e1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 1.798202e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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allele num: 66720
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Latino
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num of homozygotes: 0

African
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InbreedingCoeff
type: SiteQuality
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FS
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MQ
type: SiteQuality
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BaseQRankSum
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QD
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
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allele num: 66720
num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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ReadPosRankSum
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DP
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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MQ
type: SiteQuality
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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allele frequency: 0.0e0
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African
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Latino
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South Asian
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Other
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MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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BaseQRankSum
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MQ
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FS
type: SiteQuality
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ClippingRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

African
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European (Finnish)
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Other
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East Asian
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Latino
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South Asian
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BaseQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
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ClippingRankSum
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QD
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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allele num: 66722
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Other
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European (Finnish)
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African
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South Asian
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Latino
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQRankSum
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DP
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Other
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QD
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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DP
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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Other
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European (Non-Finnish)
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East Asian
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South Asian
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European (Finnish)
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QD
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BaseQRankSum
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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African
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European (Finnish)
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European (Non-Finnish)
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QD
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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DP
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MQ
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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Other
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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European (Finnish)
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East Asian
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Other
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African
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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DP
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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ClippingRankSum
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DP
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QD
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Latino
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African
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East Asian
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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VQSLOD
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ClippingRankSum
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FS
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.097560975609756e-5
allele num: 16400
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.176e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-2

DP
type: SiteQuality
SIO_000300: 1.788543e6

VQSLOD
type: SiteQuality
SIO_000300: 6.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.95e0

QD
type: SiteQuality
SIO_000300: 1.329e1

GenotypeQuality
all individuals: 163
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 763
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.040773890245005e-5
allele num: 66366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

DP
type: SiteQuality
SIO_000300: 1.788543e6

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-2

QD
type: SiteQuality
SIO_000300: 1.329e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.04e-1

FS
type: SiteQuality
SIO_000300: 7.176e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 45

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 44
allele frequency: 2.682599682965492e-3
allele num: 16402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506795648374167e-5
allele num: 66366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.78901e6

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.07e-1

FS
type: SiteQuality
SIO_000300: 7.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.73e-1

QD
type: SiteQuality
SIO_000300: 1.42e1

GenotypeQuality
all individuals: 44940
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 162
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variant carriers: 0

GenotypeQuality
all individuals: 4388
bin: 9.75e1
variant carriers: 6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.830917874396135e-4
allele num: 10350
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.729050279329609e-5
allele num: 11456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66208
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.311e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.14e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

FS
type: SiteQuality
SIO_000300: 6.39e-1

DP
type: SiteQuality
SIO_000300: 1.783468e6

GenotypeQuality
all individuals: 1192
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 744
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variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52522725886157e-5
allele num: 65564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e0

VQSLOD
type: SiteQuality
SIO_000300: -2.945e-1

QD
type: SiteQuality
SIO_000300: 1.218e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.178e0

MQRankSum
type: SiteQuality
SIO_000300: -7.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

FS
type: SiteQuality
SIO_000300: 7.281e0

DP
type: SiteQuality
SIO_000300: 1.761444e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.93e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
all individuals: 165
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 22

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 241
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GenotypeQuality
all individuals: 407
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.096875655273642e-3
allele num: 9538
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.759906304899473e-5
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58740
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.581e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.905e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

DP
type: SiteQuality
SIO_000300: 1.283769e6

MQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.11e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1296
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 721
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.718854592785422e-4
allele num: 16134
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

MQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

QD
type: SiteQuality
SIO_000300: 1.799e1

DP
type: SiteQuality
SIO_000300: 1.462781e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1129
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2592
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variant carriers: 0

GenotypeQuality
all individuals: 1294
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GenotypeQuality
all individuals: 145
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16098
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527230520174715e-5
allele num: 65478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.098e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.467779e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.729e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

FS
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5615
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 203
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GenotypeQuality
all individuals: 1121
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GenotypeQuality
all individuals: 1019
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GenotypeQuality
all individuals: 109
bin: 1.75e1
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GenotypeQuality
all individuals: 40822
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variant carriers: 0

GenotypeQuality
all individuals: 1960
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variant carriers: 0

GenotypeQuality
all individuals: 1121
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52452968259292e-5
allele num: 65594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.912e0

DP
type: SiteQuality
SIO_000300: 1.477749e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.219e0

FS
type: SiteQuality
SIO_000300: 1.3956e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.351834430856068e-4
allele num: 8504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65594
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.219e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.912e0

FS
type: SiteQuality
SIO_000300: 1.3956e1

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

DP
type: SiteQuality
SIO_000300: 1.477749e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.185822095756526e-5
allele num: 16166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.487648e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

MQ
type: SiteQuality
SIO_000300: 5.914e1

VQSLOD
type: SiteQuality
SIO_000300: -5.003e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.713e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.21e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 234
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variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.464571780653111e-4
allele num: 16230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

DP
type: SiteQuality
SIO_000300: 1.523605e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.284e-1

QD
type: SiteQuality
SIO_000300: 1.578e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507249871883761e-5
allele num: 66346
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.100536847242558e-5
allele num: 16392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.182e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.93e-1

DP
type: SiteQuality
SIO_000300: 1.547153e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.86e-2

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

VQSLOD
type: SiteQuality
SIO_000300: 2.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.538e0

FS
type: SiteQuality
SIO_000300: 8.301e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.95e0

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.251e1

DP
type: SiteQuality
SIO_000300: 1.549932e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505253334136135e-5
allele num: 66434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.21e0

VQSLOD
type: SiteQuality
SIO_000300: -2.083e0

QD
type: SiteQuality
SIO_000300: 7.66e0

FS
type: SiteQuality
SIO_000300: 1.783e0

DP
type: SiteQuality
SIO_000300: 1.551597e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.077e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504257047444267e-5
allele num: 66478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.553563e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.684e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.0e-3

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.382e1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3