1-6528198-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528198
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528198
    reference: chr 1
allele count: 2
allele frequency: 2.637478570486615e-5
allele num: 75830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2905C>T
  hgvsp: ENSP00000441445.1:p.Arg969Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2698C>T
  hgvsp: ENSP00000366966.2:p.Arg900Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2698C>T
  hgvsp: ENSP00000366954.1:p.Arg900Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-245C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2929C>T
  hgvsp: ENSP00000366977.1:p.Arg977Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2698C>T
  hgvsp: ENSP00000383704.1:p.Arg900Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2698C>T
  hgvsp: ENSP00000437710.1:p.Arg900Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2809C>T
  hgvsp: ENSP00000366961.1:p.Arg937Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1900C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2698C>T
  hgvsp: ENSP00000366957.3:p.Arg900Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3174C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2866C>T
  hgvsp: ENSP00000383706.3:p.Arg956Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2935C>T
  hgvsp: ENSP00000439625.1:p.Arg979Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2698C>T
  hgvsp: ENSP00000344570.5:p.Arg900Cys
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22595
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg979Cys
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

1-6528205-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528205
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528205
    reference: chr 1
allele count: 1
allele frequency: 1.245205957065299e-5
allele num: 80308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2691C>T
  hgvsp: ENST00000400913.1:c.2691C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1893C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3167C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2691C>T
  hgvsp: ENST00000377737.2:c.2691C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2898C>T
  hgvsp: ENST00000535355.1:c.2898C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2802C>T
  hgvsp: ENST00000377732.1:c.2802C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2859C>T
  hgvsp: ENST00000400915.3:c.2859C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2691C>T
  hgvsp: ENST00000544978.1:c.2691C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2691C>T
  hgvsp: ENST00000377728.3:c.2691C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2691C>T
  hgvsp: ENST00000377725.1:c.2691C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2922C>T
  hgvsp: ENST00000377748.1:c.2922C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2928C>T
  hgvsp: ENST00000537245.1:c.2928C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2691C>T
  hgvsp: ENST00000340850.5:c.2691C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-252C>T
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala976Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

1-6528211-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528211
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528211
    reference: chr 1
allele count: 1
allele frequency: 1.190986613310466e-5
allele num: 83964
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-258C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2685C>G
  hgvsp: ENST00000377737.2:c.2685C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2685C>G
  hgvsp: ENST00000377728.3:c.2685C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1887C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2685C>G
  hgvsp: ENST00000340850.5:c.2685C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2685C>G
  hgvsp: ENST00000377725.1:c.2685C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2853C>G
  hgvsp: ENST00000400915.3:c.2853C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2916C>G
  hgvsp: ENST00000377748.1:c.2916C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2796C>G
  hgvsp: ENST00000377732.1:c.2796C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2922C>G
  hgvsp: ENST00000537245.1:c.2922C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2685C>G
  hgvsp: ENST00000544978.1:c.2685C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2892C>G
  hgvsp: ENST00000535355.1:c.2892C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2685C>G
  hgvsp: ENST00000400913.1:c.2685C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3161C>G
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26889
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro974Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

1-6528213-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528213
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528213
    reference: chr 1
allele count: 2
allele frequency: 2.363172322525759e-5
allele num: 84632
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2683C>G
  hgvsp: ENSP00000366957.3:p.Pro895Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2890C>G
  hgvsp: ENSP00000441445.1:p.Pro964Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2683C>G
  hgvsp: ENSP00000366954.1:p.Pro895Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3159C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-260C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1885C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2914C>G
  hgvsp: ENSP00000366977.1:p.Pro972Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2794C>G
  hgvsp: ENSP00000366961.1:p.Pro932Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2683C>G
  hgvsp: ENSP00000383704.1:p.Pro895Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2683C>G
  hgvsp: ENSP00000437710.1:p.Pro895Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2851C>G
  hgvsp: ENSP00000383706.3:p.Pro951Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2683C>G
  hgvsp: ENSP00000366966.2:p.Pro895Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2920C>G
  hgvsp: ENSP00000439625.1:p.Pro974Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2683C>G
  hgvsp: ENSP00000344570.5:p.Pro895Ala
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro974Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD

1-6528215-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528215
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528215
    reference: chr 1
allele count: 2
allele frequency: 2.339454907006668e-5
allele num: 85490
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2792C>T
  hgvsp: ENSP00000366961.1:p.Thr931Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3157C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2681C>T
  hgvsp: ENSP00000366954.1:p.Thr894Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2681C>T
  hgvsp: ENSP00000437710.1:p.Thr894Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2681C>T
  hgvsp: ENSP00000366957.3:p.Thr894Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2681C>T
  hgvsp: ENSP00000344570.5:p.Thr894Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2681C>T
  hgvsp: ENSP00000366966.2:p.Thr894Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2849C>T
  hgvsp: ENSP00000383706.3:p.Thr950Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2918C>T
  hgvsp: ENSP00000439625.1:p.Thr973Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-262C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2888C>T
  hgvsp: ENSP00000441445.1:p.Thr963Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2912C>T
  hgvsp: ENSP00000366977.1:p.Thr971Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2681C>T
  hgvsp: ENSP00000383704.1:p.Thr894Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1883C>T
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr973Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/1-6528218-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528218
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528218
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 86550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2678G>T
  hgvsp: ENSP00000344570.5:p.Gly893Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2909G>T
  hgvsp: ENSP00000366977.1:p.Gly970Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2885G>T
  hgvsp: ENSP00000441445.1:p.Gly962Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3154G>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2846G>T
  hgvsp: ENSP00000383706.3:p.Gly949Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2915G>T
  hgvsp: ENSP00000439625.1:p.Gly972Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2678G>T
  hgvsp: ENSP00000366966.2:p.Gly893Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2678G>T
  hgvsp: ENSP00000366957.3:p.Gly893Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2789G>T
  hgvsp: ENSP00000366961.1:p.Gly930Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2678G>T
  hgvsp: ENSP00000366954.1:p.Gly893Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2678G>T
  hgvsp: ENSP00000383704.1:p.Gly893Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-265G>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2678G>T
  hgvsp: ENSP00000437710.1:p.Gly893Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1880G>T
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3927
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly972Val
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

1-6528219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528219
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528219
    reference: chr 1
allele count: 25
allele frequency: 2.877134834046863e-4
allele num: 86892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2677G>A
  hgvsp: ENSP00000344570.5:p.Gly893Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2677G>A
  hgvsp: ENSP00000383704.1:p.Gly893Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2677G>A
  hgvsp: ENSP00000366957.3:p.Gly893Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2845G>A
  hgvsp: ENSP00000383706.3:p.Gly949Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2677G>A
  hgvsp: ENSP00000437710.1:p.Gly893Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2677G>A
  hgvsp: ENSP00000366954.1:p.Gly893Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2908G>A
  hgvsp: ENSP00000366977.1:p.Gly970Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2914G>A
  hgvsp: ENSP00000439625.1:p.Gly972Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2788G>A
  hgvsp: ENSP00000366961.1:p.Gly930Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-266G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3153G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2884G>A
  hgvsp: ENSP00000441445.1:p.Gly962Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2677G>A
  hgvsp: ENSP00000366966.2:p.Gly893Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1879G>A
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12749
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7615
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27723
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Gly972Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

1-6528220-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528220
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528220
    reference: chr 1
allele count: 1
allele frequency: 1.14510809820447e-5
allele num: 87328
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2913T>C
  hgvsp: ENST00000537245.1:c.2913T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3152T>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2676T>C
  hgvsp: ENST00000400913.1:c.2676T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2676T>C
  hgvsp: ENST00000377737.2:c.2676T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2676T>C
  hgvsp: ENST00000340850.5:c.2676T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2787T>C
  hgvsp: ENST00000377732.1:c.2787T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2907T>C
  hgvsp: ENST00000377748.1:c.2907T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2676T>C
  hgvsp: ENST00000377725.1:c.2676T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2676T>C
  hgvsp: ENST00000377728.3:c.2676T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-267T>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2844T>C
  hgvsp: ENST00000400915.3:c.2844T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2883T>C
  hgvsp: ENST00000535355.1:c.2883T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1878T>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2676T>C
  hgvsp: ENST00000544978.1:c.2676T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3883
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His971His
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

1-6528227-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528227
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528227
    reference: chr 1
allele count: 1
allele frequency: 1.123570256848161e-5
allele num: 89002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2669G>C
  hgvsp: ENSP00000383704.1:p.Gly890Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2900G>C
  hgvsp: ENSP00000366977.1:p.Gly967Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2669G>C
  hgvsp: ENSP00000344570.5:p.Gly890Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-274G>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2906G>C
  hgvsp: ENSP00000439625.1:p.Gly969Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2669G>C
  hgvsp: ENSP00000366954.1:p.Gly890Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2669G>C
  hgvsp: ENSP00000366966.2:p.Gly890Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2876G>C
  hgvsp: ENSP00000441445.1:p.Gly959Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2669G>C
  hgvsp: ENSP00000366957.3:p.Gly890Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2780G>C
  hgvsp: ENSP00000366961.1:p.Gly927Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2669G>C
  hgvsp: ENSP00000437710.1:p.Gly890Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2837G>C
  hgvsp: ENSP00000383706.3:p.Gly946Ala
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3145G>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1871G>C
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28063
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly969Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

1-6528233-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528233
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528233
    reference: chr 1
allele count: 1
allele frequency: 1.088399834563225e-5
allele num: 91878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2663G>A
  hgvsp: ENSP00000344570.5:p.Gly888Glu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2663G>A
  hgvsp: ENSP00000366954.1:p.Gly888Glu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2900G>A
  hgvsp: ENSP00000439625.1:p.Gly967Glu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2894G>A
  hgvsp: ENSP00000366977.1:p.Gly965Glu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-280G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2774G>A
  hgvsp: ENSP00000366961.1:p.Gly925Glu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1865G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2663G>A
  hgvsp: ENSP00000366957.3:p.Gly888Glu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2870G>A
  hgvsp: ENSP00000441445.1:p.Gly957Glu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2831G>A
  hgvsp: ENSP00000383706.3:p.Gly944Glu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3139G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2663G>A
  hgvsp: ENSP00000366966.2:p.Gly888Glu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2663G>A
  hgvsp: ENSP00000383704.1:p.Gly888Glu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2663G>A
  hgvsp: ENSP00000437710.1:p.Gly888Glu
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly967Glu
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

1-6528254-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528254
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528254
    reference: chr 1
allele count: 2
allele frequency: 2.052545155993432e-5
allele num: 97440
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2849G>A
  hgvsp: ENSP00000441445.1:p.Ser950Asn
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2642G>A
  hgvsp: ENSP00000366957.3:p.Ser881Asn
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1844G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2642G>A
  hgvsp: ENSP00000437710.1:p.Ser881Asn
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-301G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2810G>A
  hgvsp: ENSP00000383706.3:p.Ser937Asn
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2642G>A
  hgvsp: ENSP00000344570.5:p.Ser881Asn
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2642G>A
  hgvsp: ENSP00000383704.1:p.Ser881Asn
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2879G>A
  hgvsp: ENSP00000439625.1:p.Ser960Asn
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3118G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2642G>A
  hgvsp: ENSP00000366954.1:p.Ser881Asn
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2873G>A
  hgvsp: ENSP00000366977.1:p.Ser958Asn
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2753G>A
  hgvsp: ENSP00000366961.1:p.Ser918Asn
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2642G>A
  hgvsp: ENSP00000366966.2:p.Ser881Asn
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser960Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

1-6528255-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528255
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528255
    reference: chr 1
allele count: 2
allele frequency: 2.046287012216334e-5
allele num: 97738
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2878A>G
  hgvsp: ENSP00000439625.1:p.Ser960Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2641A>G
  hgvsp: ENSP00000344570.5:p.Ser881Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2641A>G
  hgvsp: ENSP00000383704.1:p.Ser881Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1843A>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2848A>G
  hgvsp: ENSP00000441445.1:p.Ser950Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2872A>G
  hgvsp: ENSP00000366977.1:p.Ser958Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2809A>G
  hgvsp: ENSP00000383706.3:p.Ser937Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2641A>G
  hgvsp: ENSP00000437710.1:p.Ser881Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-302A>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2641A>G
  hgvsp: ENSP00000366957.3:p.Ser881Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2752A>G
  hgvsp: ENSP00000366961.1:p.Ser918Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3117A>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2641A>G
  hgvsp: ENSP00000366966.2:p.Ser881Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2641A>G
  hgvsp: ENSP00000366954.1:p.Ser881Gly
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8831
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10779
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser960Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

1-6528261-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528261
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528261
    reference: chr 1
allele count: 3
allele frequency: 3.04062271953296e-5
allele num: 98664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2635G>A
  hgvsp: ENSP00000344570.5:p.Glu879Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2842G>A
  hgvsp: ENSP00000441445.1:p.Glu948Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2872G>A
  hgvsp: ENSP00000439625.1:p.Glu958Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1837G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2866G>A
  hgvsp: ENSP00000366977.1:p.Glu956Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2803G>A
  hgvsp: ENSP00000383706.3:p.Glu935Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2746G>A
  hgvsp: ENSP00000366961.1:p.Glu916Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2635G>A
  hgvsp: ENSP00000383704.1:p.Glu879Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3111G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2635G>A
  hgvsp: ENSP00000366957.3:p.Glu879Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2635G>A
  hgvsp: ENSP00000366966.2:p.Glu879Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2635G>A
  hgvsp: ENSP00000366954.1:p.Glu879Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2635G>A
  hgvsp: ENSP00000437710.1:p.Glu879Lys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-308G>A
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu958Lys
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

1-6528262-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528262
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528262
    reference: chr 1
allele count: 32
allele frequency: 3.23454493995876e-4
allele num: 98932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2634C>T
  hgvsp: ENST00000377728.3:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2634C>T
  hgvsp: ENST00000377725.1:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-309C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2634C>T
  hgvsp: ENST00000377737.2:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1836C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2634C>T
  hgvsp: ENST00000400913.1:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2634C>T
  hgvsp: ENST00000544978.1:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2841C>T
  hgvsp: ENST00000535355.1:c.2841C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2634C>T
  hgvsp: ENST00000340850.5:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2871C>T
  hgvsp: ENST00000537245.1:c.2871C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2745C>T
  hgvsp: ENST00000377732.1:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2865C>T
  hgvsp: ENST00000377748.1:c.2865C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2802C>T
  hgvsp: ENST00000400915.3:c.2802C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3110C>T
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11035
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8484
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 32912
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser957Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

1-6528262-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528262
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528262
    reference: chr 1
allele count: 1
allele frequency: 1.010795293737112e-5
allele num: 98932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2865C>A
  hgvsp: ENST00000377748.1:c.2865C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2634C>A
  hgvsp: ENST00000400913.1:c.2634C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2634C>A
  hgvsp: ENST00000544978.1:c.2634C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2634C>A
  hgvsp: ENST00000377725.1:c.2634C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2802C>A
  hgvsp: ENST00000400915.3:c.2802C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2634C>A
  hgvsp: ENST00000340850.5:c.2634C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2634C>A
  hgvsp: ENST00000377737.2:c.2634C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2871C>A
  hgvsp: ENST00000537245.1:c.2871C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3110C>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2745C>A
  hgvsp: ENST00000377732.1:c.2745C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2634C>A
  hgvsp: ENST00000377728.3:c.2634C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2841C>A
  hgvsp: ENST00000535355.1:c.2841C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-309C>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1836C>A
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11035
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser957Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

1-6528282-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528282
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528282
    reference: chr 1
allele count: 5
allele frequency: 4.992810353091548e-5
allele num: 100144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2821C>T
  hgvsp: ENSP00000441445.1:p.His941Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3090C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1816C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2614C>T
  hgvsp: ENSP00000383704.1:p.His872Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-329C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2614C>T
  hgvsp: ENSP00000366966.2:p.His872Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2614C>T
  hgvsp: ENSP00000366957.3:p.His872Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2725C>T
  hgvsp: ENSP00000366961.1:p.His909Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2851C>T
  hgvsp: ENSP00000439625.1:p.His951Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2614C>T
  hgvsp: ENSP00000344570.5:p.His872Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2614C>T
  hgvsp: ENSP00000437710.1:p.His872Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2782C>T
  hgvsp: ENSP00000383706.3:p.His928Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2845C>T
  hgvsp: ENSP00000366977.1:p.His949Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2614C>T
  hgvsp: ENSP00000366954.1:p.His872Tyr
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8485
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His951Tyr
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-6528286-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528286
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528286
    reference: chr 1
allele count: 10
allele frequency: 9.991207737191271e-5
allele num: 100088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2778G>A
  hgvsp: ENST00000400915.3:c.2778G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2721G>A
  hgvsp: ENST00000377732.1:c.2721G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1812G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2847G>A
  hgvsp: ENST00000537245.1:c.2847G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2610G>A
  hgvsp: ENST00000400913.1:c.2610G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2610G>A
  hgvsp: ENST00000377737.2:c.2610G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2610G>A
  hgvsp: ENST00000377725.1:c.2610G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2817G>A
  hgvsp: ENST00000535355.1:c.2817G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2610G>A
  hgvsp: ENST00000340850.5:c.2610G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-333G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2610G>A
  hgvsp: ENST00000377728.3:c.2610G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2610G>A
  hgvsp: ENST00000544978.1:c.2610G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2841G>A
  hgvsp: ENST00000377748.1:c.2841G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3086G>A
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31213
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Pro949Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

1-6528287-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528287
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528287
    reference: chr 1
allele count: 5
allele frequency: 4.980178888025658e-5
allele num: 100398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2777C>T
  hgvsp: ENSP00000383706.3:p.Pro926Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2609C>T
  hgvsp: ENSP00000366957.3:p.Pro870Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3085C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1811C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2609C>T
  hgvsp: ENSP00000344570.5:p.Pro870Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2816C>T
  hgvsp: ENSP00000441445.1:p.Pro939Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2840C>T
  hgvsp: ENSP00000366977.1:p.Pro947Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2609C>T
  hgvsp: ENSP00000383704.1:p.Pro870Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2609C>T
  hgvsp: ENSP00000366954.1:p.Pro870Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2846C>T
  hgvsp: ENSP00000439625.1:p.Pro949Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2720C>T
  hgvsp: ENSP00000366961.1:p.Pro907Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2609C>T
  hgvsp: ENSP00000366966.2:p.Pro870Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-334C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2609C>T
  hgvsp: ENSP00000437710.1:p.Pro870Leu
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11490
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31190
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro949Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

1-6528298-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528298
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528298
    reference: chr 1
allele count: 2
allele frequency: 1.981296560469171e-5
allele num: 100944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2598G>A
  hgvsp: ENST00000377737.2:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2598G>A
  hgvsp: ENST00000377725.1:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2766G>A
  hgvsp: ENST00000400915.3:c.2766G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2598G>A
  hgvsp: ENST00000544978.1:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2829G>A
  hgvsp: ENST00000377748.1:c.2829G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2598G>A
  hgvsp: ENST00000340850.5:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2709G>A
  hgvsp: ENST00000377732.1:c.2709G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2598G>A
  hgvsp: ENST00000377728.3:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-345G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3074G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2805G>A
  hgvsp: ENST00000535355.1:c.2805G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1800G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2835G>A
  hgvsp: ENST00000537245.1:c.2835G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2598G>A
  hgvsp: ENST00000400913.1:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5164
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu945Leu
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD

1-6528302-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528302
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528302
    reference: chr 1
allele count: 501
allele frequency: 4.97181644966656e-3
allele num: 100768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2705A>G
  hgvsp: ENSP00000366961.1:p.Gln902Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2594A>G
  hgvsp: ENSP00000344570.5:p.Gln865Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2762A>G
  hgvsp: ENSP00000383706.3:p.Gln921Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2594A>G
  hgvsp: ENSP00000366957.3:p.Gln865Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2594A>G
  hgvsp: ENSP00000366966.2:p.Gln865Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2594A>G
  hgvsp: ENSP00000383704.1:p.Gln865Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2825A>G
  hgvsp: ENSP00000366977.1:p.Gln942Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2594A>G
  hgvsp: ENSP00000366954.1:p.Gln865Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2801A>G
  hgvsp: ENSP00000441445.1:p.Gln934Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2594A>G
  hgvsp: ENSP00000437710.1:p.Gln865Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1796A>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-349A>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3070A>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2831A>G
  hgvsp: ENSP00000439625.1:p.Gln944Arg
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 1.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 3.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 3.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 11519
  bin: 2.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 8394
  bin: 7.5e0
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 28559
  bin: 2.25e1
  variant carriers: 56
genotype quality: GenotypeQuality
hgvs: p.Gln944Arg
num of homozygotes: 13
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ

1-6528314-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528314
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528314
    reference: chr 1
allele count: 6
allele frequency: 6.02918123718799e-5
allele num: 99516
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2582G>A
  hgvsp: ENSP00000437710.1:p.Arg861His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2750G>A
  hgvsp: ENSP00000383706.3:p.Arg917His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2582G>A
  hgvsp: ENSP00000383704.1:p.Arg861His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2813G>A
  hgvsp: ENSP00000366977.1:p.Arg938His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2789G>A
  hgvsp: ENSP00000441445.1:p.Arg930His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2582G>A
  hgvsp: ENSP00000366957.3:p.Arg861His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2582G>A
  hgvsp: ENSP00000366954.1:p.Arg861His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-361G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3058G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2582G>A
  hgvsp: ENSP00000366966.2:p.Arg861His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2693G>A
  hgvsp: ENSP00000366961.1:p.Arg898His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2819G>A
  hgvsp: ENSP00000439625.1:p.Arg940His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2582G>A
  hgvsp: ENSP00000344570.5:p.Arg861His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1784G>A
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8066
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25900
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg940His
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

1-6528315-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528315
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528315
    reference: chr 1
allele count: 129
allele frequency: 1.286680364659179e-3
allele num: 100258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2581C>T
  hgvsp: ENSP00000366957.3:p.Arg861Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2581C>T
  hgvsp: ENSP00000344570.5:p.Arg861Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2692C>T
  hgvsp: ENSP00000366961.1:p.Arg898Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3057C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2581C>T
  hgvsp: ENSP00000437710.1:p.Arg861Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2818C>T
  hgvsp: ENSP00000439625.1:p.Arg940Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2581C>T
  hgvsp: ENSP00000366954.1:p.Arg861Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2749C>T
  hgvsp: ENSP00000383706.3:p.Arg917Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2812C>T
  hgvsp: ENSP00000366977.1:p.Arg938Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2581C>T
  hgvsp: ENSP00000383704.1:p.Arg861Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1783C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2788C>T
  hgvsp: ENSP00000441445.1:p.Arg930Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2581C>T
  hgvsp: ENSP00000366966.2:p.Arg861Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-362C>T
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25930
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8145
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8511
  bin: 7.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
hgvs: p.Arg940Cys
num of homozygotes: 3
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

1-6528317-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528317
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528317
    reference: chr 1
allele count: 1
allele frequency: 1.00727250750418e-5
allele num: 99278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-364G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3055G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2786G>A
  hgvsp: ENSP00000441445.1:p.Arg929His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2810G>A
  hgvsp: ENSP00000366977.1:p.Arg937His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2690G>A
  hgvsp: ENSP00000366961.1:p.Arg897His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1781G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2579G>A
  hgvsp: ENSP00000366957.3:p.Arg860His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2579G>A
  hgvsp: ENSP00000383704.1:p.Arg860His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2579G>A
  hgvsp: ENSP00000366966.2:p.Arg860His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2579G>A
  hgvsp: ENSP00000366954.1:p.Arg860His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2579G>A
  hgvsp: ENSP00000344570.5:p.Arg860His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2579G>A
  hgvsp: ENSP00000437710.1:p.Arg860His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2747G>A
  hgvsp: ENSP00000383706.3:p.Arg916His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2816G>A
  hgvsp: ENSP00000439625.1:p.Arg939His
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg939His
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

1-6528318-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528318
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528318
    reference: chr 1
allele count: 4
allele frequency: 4.007212983370066e-5
allele num: 99820
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2815C>T
  hgvsp: ENSP00000439625.1:p.Arg939Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2809C>T
  hgvsp: ENSP00000366977.1:p.Arg937Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2746C>T
  hgvsp: ENSP00000383706.3:p.Arg916Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2785C>T
  hgvsp: ENSP00000441445.1:p.Arg929Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-365C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2689C>T
  hgvsp: ENSP00000366961.1:p.Arg897Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2578C>T
  hgvsp: ENSP00000366954.1:p.Arg860Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2578C>T
  hgvsp: ENSP00000366957.3:p.Arg860Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1780C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2578C>T
  hgvsp: ENSP00000383704.1:p.Arg860Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2578C>T
  hgvsp: ENSP00000366966.2:p.Arg860Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3054C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2578C>T
  hgvsp: ENSP00000344570.5:p.Arg860Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2578C>T
  hgvsp: ENSP00000437710.1:p.Arg860Cys
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg939Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

1-6528319-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528319
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528319
    reference: chr 1
allele count: 3
allele frequency: 2.999820010799352e-5
allele num: 100006
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1779C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3053C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2814C>T
  hgvsp: ENST00000537245.1:c.2814C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2577C>T
  hgvsp: ENST00000340850.5:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2577C>T
  hgvsp: ENST00000400913.1:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2577C>T
  hgvsp: ENST00000377737.2:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2688C>T
  hgvsp: ENST00000377732.1:c.2688C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2577C>T
  hgvsp: ENST00000377728.3:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2808C>T
  hgvsp: ENST00000377748.1:c.2808C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2577C>T
  hgvsp: ENST00000544978.1:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2745C>T
  hgvsp: ENST00000400915.3:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-366C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2577C>T
  hgvsp: ENST00000377725.1:c.2577C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2784C>T
  hgvsp: ENST00000535355.1:c.2784C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg938Arg
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-6528320-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528320
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528320
    reference: chr 1
allele count: 804
allele frequency: 8.051433034909572e-3
allele num: 99858
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2576G>A
  hgvsp: ENSP00000437710.1:p.Arg859His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2576G>A
  hgvsp: ENSP00000366957.3:p.Arg859His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2744G>A
  hgvsp: ENSP00000383706.3:p.Arg915His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2807G>A
  hgvsp: ENSP00000366977.1:p.Arg936His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2813G>A
  hgvsp: ENSP00000439625.1:p.Arg938His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1778G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2576G>A
  hgvsp: ENSP00000344570.5:p.Arg859His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2576G>A
  hgvsp: ENSP00000366954.1:p.Arg859His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2687G>A
  hgvsp: ENSP00000366961.1:p.Arg896His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2576G>A
  hgvsp: ENSP00000383704.1:p.Arg859His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3052G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-367G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2783G>A
  hgvsp: ENSP00000441445.1:p.Arg928His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2576G>A
  hgvsp: ENSP00000366966.2:p.Arg859His
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24819
  bin: 2.25e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 1.75e1
  variant carriers: 124
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 3.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8423
  bin: 7.5e0
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 10486
  bin: 2.75e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
hgvs: p.Arg938His
num of homozygotes: 35
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-6528321-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528321
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528321
    reference: chr 1
allele count: 32
allele frequency: 3.192147317598707e-4
allele num: 100246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2575C>T
  hgvsp: ENSP00000366966.2:p.Arg859Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3051C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2575C>T
  hgvsp: ENSP00000383704.1:p.Arg859Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2812C>T
  hgvsp: ENSP00000439625.1:p.Arg938Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2806C>T
  hgvsp: ENSP00000366977.1:p.Arg936Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2782C>T
  hgvsp: ENSP00000441445.1:p.Arg928Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2686C>T
  hgvsp: ENSP00000366961.1:p.Arg896Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2575C>T
  hgvsp: ENSP00000437710.1:p.Arg859Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2575C>T
  hgvsp: ENSP00000366957.3:p.Arg859Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2575C>T
  hgvsp: ENSP00000344570.5:p.Arg859Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2575C>T
  hgvsp: ENSP00000366954.1:p.Arg859Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-368C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1777C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2743C>T
  hgvsp: ENSP00000383706.3:p.Arg915Cys
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8447
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10452
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9477
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24606
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Arg938Cys
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-6528322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528322
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528322
    reference: chr 1
allele count: 1
allele frequency: 1.005550639530207e-5
allele num: 99448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2805C>T
  hgvsp: ENST00000377748.1:c.2805C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2685C>T
  hgvsp: ENST00000377732.1:c.2685C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2574C>T
  hgvsp: ENST00000544978.1:c.2574C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2781C>T
  hgvsp: ENST00000535355.1:c.2781C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2574C>T
  hgvsp: ENST00000400913.1:c.2574C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2574C>T
  hgvsp: ENST00000377725.1:c.2574C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2574C>T
  hgvsp: ENST00000377728.3:c.2574C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1776C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2574C>T
  hgvsp: ENST00000340850.5:c.2574C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2742C>T
  hgvsp: ENST00000400915.3:c.2742C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-369C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3050C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2811C>T
  hgvsp: ENST00000537245.1:c.2811C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2574C>T
  hgvsp: ENST00000377737.2:c.2574C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4523
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu937Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-6528326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528326
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528326
    reference: chr 1
allele count: 4
allele frequency: 4.025116728385123e-5
allele num: 99376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2570G>A
  hgvsp: ENSP00000383704.1:p.Arg857His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2570G>A
  hgvsp: ENSP00000437710.1:p.Arg857His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2807G>A
  hgvsp: ENSP00000439625.1:p.Arg936His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2570G>A
  hgvsp: ENSP00000366957.3:p.Arg857His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2570G>A
  hgvsp: ENSP00000344570.5:p.Arg857His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2570G>A
  hgvsp: ENSP00000366954.1:p.Arg857His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2570G>A
  hgvsp: ENSP00000366966.2:p.Arg857His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2738G>A
  hgvsp: ENSP00000383706.3:p.Arg913His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2801G>A
  hgvsp: ENSP00000366977.1:p.Arg934His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3046G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2681G>A
  hgvsp: ENSP00000366961.1:p.Arg894His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1772G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2777G>A
  hgvsp: ENSP00000441445.1:p.Arg926His
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-373G>A
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23606
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9810
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg936His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD

1-6528327-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528327
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528327
    reference: chr 1
allele count: 3
allele frequency: 3.019627579265224e-5
allele num: 99350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2800C>T
  hgvsp: ENSP00000366977.1:p.Arg934Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2680C>T
  hgvsp: ENSP00000366961.1:p.Arg894Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2806C>T
  hgvsp: ENSP00000439625.1:p.Arg936Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-374C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2776C>T
  hgvsp: ENSP00000441445.1:p.Arg926Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2569C>T
  hgvsp: ENSP00000383704.1:p.Arg857Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2569C>T
  hgvsp: ENSP00000366957.3:p.Arg857Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2569C>T
  hgvsp: ENSP00000366954.1:p.Arg857Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3045C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2569C>T
  hgvsp: ENSP00000437710.1:p.Arg857Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2569C>T
  hgvsp: ENSP00000344570.5:p.Arg857Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2569C>T
  hgvsp: ENSP00000366966.2:p.Arg857Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1771C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2737C>T
  hgvsp: ENSP00000383706.3:p.Arg913Cys
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8703
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg936Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

1-6528327-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528327
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528327
    reference: chr 1
allele count: 2
allele frequency: 2.013085052843483e-5
allele num: 99350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2800C>G
  hgvsp: ENSP00000366977.1:p.Arg934Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2737C>G
  hgvsp: ENSP00000383706.3:p.Arg913Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2569C>G
  hgvsp: ENSP00000366966.2:p.Arg857Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3045C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2680C>G
  hgvsp: ENSP00000366961.1:p.Arg894Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2569C>G
  hgvsp: ENSP00000383704.1:p.Arg857Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2776C>G
  hgvsp: ENSP00000441445.1:p.Arg926Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-374C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2569C>G
  hgvsp: ENSP00000366957.3:p.Arg857Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2569C>G
  hgvsp: ENSP00000366954.1:p.Arg857Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1771C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2806C>G
  hgvsp: ENSP00000439625.1:p.Arg936Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2569C>G
  hgvsp: ENSP00000437710.1:p.Arg857Gly
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2569C>G
  hgvsp: ENSP00000344570.5:p.Arg857Gly
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg936Gly
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-6528327-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528327
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528327
    reference: chr 1
allele count: 2
allele frequency: 2.013085052843483e-5
allele num: 99350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2680C>A
  hgvsp: ENSP00000366961.1:p.Arg894Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2569C>A
  hgvsp: ENSP00000366966.2:p.Arg857Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2737C>A
  hgvsp: ENSP00000383706.3:p.Arg913Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2800C>A
  hgvsp: ENSP00000366977.1:p.Arg934Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2569C>A
  hgvsp: ENSP00000437710.1:p.Arg857Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2569C>A
  hgvsp: ENSP00000383704.1:p.Arg857Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2569C>A
  hgvsp: ENSP00000366957.3:p.Arg857Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2569C>A
  hgvsp: ENSP00000366954.1:p.Arg857Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2806C>A
  hgvsp: ENSP00000439625.1:p.Arg936Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1771C>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2569C>A
  hgvsp: ENSP00000344570.5:p.Arg857Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3045C>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-374C>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2776C>A
  hgvsp: ENSP00000441445.1:p.Arg926Ser
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8703
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg936Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-6528331-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528331
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528331
    reference: chr 1
allele count: 1
allele frequency: 1.010958793319584e-5
allele num: 98916
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2802G>A
  hgvsp: ENST00000537245.1:c.2802G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2565G>A
  hgvsp: ENST00000400913.1:c.2565G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2565G>A
  hgvsp: ENST00000340850.5:c.2565G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2565G>A
  hgvsp: ENST00000377725.1:c.2565G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2796G>A
  hgvsp: ENST00000377748.1:c.2796G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2565G>A
  hgvsp: ENST00000377728.3:c.2565G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2772G>A
  hgvsp: ENST00000535355.1:c.2772G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2676G>A
  hgvsp: ENST00000377732.1:c.2676G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1767G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-378G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2565G>A
  hgvsp: ENST00000377737.2:c.2565G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3041G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2733G>A
  hgvsp: ENST00000400915.3:c.2733G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2565G>A
  hgvsp: ENST00000544978.1:c.2565G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9050
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser934Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

1-6528332-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528332
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528332
    reference: chr 1
allele count: 4
allele frequency: 4.040730564085986e-5
allele num: 98992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2564C>T
  hgvsp: ENSP00000366954.1:p.Ser855Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2675C>T
  hgvsp: ENSP00000366961.1:p.Ser892Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2564C>T
  hgvsp: ENSP00000383704.1:p.Ser855Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2795C>T
  hgvsp: ENSP00000366977.1:p.Ser932Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2564C>T
  hgvsp: ENSP00000366966.2:p.Ser855Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2801C>T
  hgvsp: ENSP00000439625.1:p.Ser934Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-379C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2771C>T
  hgvsp: ENSP00000441445.1:p.Ser924Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2732C>T
  hgvsp: ENSP00000383706.3:p.Ser911Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1766C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2564C>T
  hgvsp: ENSP00000366957.3:p.Ser855Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2564C>T
  hgvsp: ENSP00000344570.5:p.Ser855Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3040C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2564C>T
  hgvsp: ENSP00000437710.1:p.Ser855Leu
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11135
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23002
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser934Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

1-6528338-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528338
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528338
    reference: chr 1
allele count: 1
allele frequency: 1.011101898849366e-5
allele num: 98902
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3034C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2558C>G
  hgvsp: ENSP00000383704.1:p.Pro853Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2726C>G
  hgvsp: ENSP00000383706.3:p.Pro909Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2558C>G
  hgvsp: ENSP00000366957.3:p.Pro853Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2789C>G
  hgvsp: ENSP00000366977.1:p.Pro930Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1760C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2558C>G
  hgvsp: ENSP00000437710.1:p.Pro853Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2795C>G
  hgvsp: ENSP00000439625.1:p.Pro932Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2765C>G
  hgvsp: ENSP00000441445.1:p.Pro922Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2558C>G
  hgvsp: ENSP00000366966.2:p.Pro853Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2558C>G
  hgvsp: ENSP00000344570.5:p.Pro853Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2558C>G
  hgvsp: ENSP00000366954.1:p.Pro853Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-385C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2669C>G
  hgvsp: ENSP00000366961.1:p.Pro890Arg
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11749
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro932Arg
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-6528353-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528353
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528353
    reference: chr 1
allele count: 10
allele frequency: 1.025535842477695e-4
allele num: 97510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2543G>A
  hgvsp: ENSP00000344570.5:p.Arg848Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2711G>A
  hgvsp: ENSP00000383706.3:p.Arg904Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2543G>A
  hgvsp: ENSP00000383704.1:p.Arg848Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2780G>A
  hgvsp: ENSP00000439625.1:p.Arg927Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2543G>A
  hgvsp: ENSP00000366957.3:p.Arg848Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1745G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2543G>A
  hgvsp: ENSP00000366954.1:p.Arg848Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2543G>A
  hgvsp: ENSP00000437710.1:p.Arg848Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2750G>A
  hgvsp: ENSP00000441445.1:p.Arg917Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2774G>A
  hgvsp: ENSP00000366977.1:p.Arg925Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2654G>A
  hgvsp: ENSP00000366961.1:p.Arg885Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-400G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3019G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2543G>A
  hgvsp: ENSP00000366966.2:p.Arg848Gln
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6588
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19956
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13365
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg927Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-6528354-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528354
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528354
    reference: chr 1
allele count: 1
allele frequency: 1.021450459652707e-5
allele num: 97900
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2779C>T
  hgvsp: ENSP00000439625.1:p.Arg927Ter
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2749C>T
  hgvsp: ENSP00000441445.1:p.Arg917Ter
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2542C>T
  hgvsp: ENSP00000437710.1:p.Arg848Ter
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3018C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2542C>T
  hgvsp: ENSP00000366966.2:p.Arg848Ter
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2542C>T
  hgvsp: ENSP00000383704.1:p.Arg848Ter
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2542C>T
  hgvsp: ENSP00000366954.1:p.Arg848Ter
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2773C>T
  hgvsp: ENSP00000366977.1:p.Arg925Ter
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2542C>T
  hgvsp: ENSP00000366957.3:p.Arg848Ter
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2653C>T
  hgvsp: ENSP00000366961.1:p.Arg885Ter
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2542C>T
  hgvsp: ENSP00000344570.5:p.Arg848Ter
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-401C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1744C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2710C>T
  hgvsp: ENSP00000383706.3:p.Arg904Ter
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9194
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg927Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD

1-6528358-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528358
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528358
    reference: chr 1
allele count: 3
allele frequency: 3.081220985169057e-5
allele num: 97364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2538C>A
  hgvsp: ENST00000377725.1:c.2538C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2538C>A
  hgvsp: ENST00000377737.2:c.2538C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2538C>A
  hgvsp: ENST00000544978.1:c.2538C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2538C>A
  hgvsp: ENST00000400913.1:c.2538C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3014C>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2538C>A
  hgvsp: ENST00000377728.3:c.2538C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2769C>A
  hgvsp: ENST00000377748.1:c.2769C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2538C>A
  hgvsp: ENST00000340850.5:c.2538C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2775C>A
  hgvsp: ENST00000537245.1:c.2775C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2706C>A
  hgvsp: ENST00000400915.3:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2649C>A
  hgvsp: ENST00000377732.1:c.2649C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-405C>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2745C>A
  hgvsp: ENST00000535355.1:c.2745C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1740C>A
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13895
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9397
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19353
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser925Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

1-6528365-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528365
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528365
    reference: chr 1
allele count: 1
allele frequency: 1.034404286571363e-5
allele num: 96674
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2531C>T
  hgvsp: ENSP00000366966.2:p.Pro844Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1733C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2768C>T
  hgvsp: ENSP00000439625.1:p.Pro923Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2699C>T
  hgvsp: ENSP00000383706.3:p.Pro900Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2531C>T
  hgvsp: ENSP00000437710.1:p.Pro844Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2738C>T
  hgvsp: ENSP00000441445.1:p.Pro913Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2762C>T
  hgvsp: ENSP00000366977.1:p.Pro921Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2531C>T
  hgvsp: ENSP00000366957.3:p.Pro844Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2642C>T
  hgvsp: ENSP00000366961.1:p.Pro881Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2531C>T
  hgvsp: ENSP00000344570.5:p.Pro844Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2531C>T
  hgvsp: ENSP00000383704.1:p.Pro844Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2531C>T
  hgvsp: ENSP00000366954.1:p.Pro844Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-412C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3007C>T
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro923Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

1-6528371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528371
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528371
    reference: chr 1
allele count: 20
allele frequency: 2.085897248701529e-4
allele num: 95882
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2693G>A
  hgvsp: ENSP00000383706.3:p.Arg898Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2525G>A
  hgvsp: ENSP00000366954.1:p.Arg842Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2525G>A
  hgvsp: ENSP00000383704.1:p.Arg842Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2756G>A
  hgvsp: ENSP00000366977.1:p.Arg919Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2732G>A
  hgvsp: ENSP00000441445.1:p.Arg911Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1727G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2762G>A
  hgvsp: ENSP00000439625.1:p.Arg921Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2636G>A
  hgvsp: ENSP00000366961.1:p.Arg879Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2525G>A
  hgvsp: ENSP00000366957.3:p.Arg842Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2525G>A
  hgvsp: ENSP00000437710.1:p.Arg842Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-418G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2525G>A
  hgvsp: ENSP00000344570.5:p.Arg842Gln
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.3001G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2525G>A
  hgvsp: ENSP00000366966.2:p.Arg842Gln
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7059
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18689
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9836
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg921Gln
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum

1-6528390-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528390
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528390
    reference: chr 1
allele count: 1
allele frequency: 1.043166218105193e-5
allele num: 95862
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2743A>G
  hgvsp: ENSP00000439625.1:p.Met915Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2506A>G
  hgvsp: ENSP00000344570.5:p.Met836Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2674A>G
  hgvsp: ENSP00000383706.3:p.Met892Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-437A>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2737A>G
  hgvsp: ENSP00000366977.1:p.Met913Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2506A>G
  hgvsp: ENSP00000366954.1:p.Met836Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1708A>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2506A>G
  hgvsp: ENSP00000366966.2:p.Met836Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2617A>G
  hgvsp: ENSP00000366961.1:p.Met873Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2506A>G
  hgvsp: ENSP00000383704.1:p.Met836Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2506A>G
  hgvsp: ENSP00000437710.1:p.Met836Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2506A>G
  hgvsp: ENSP00000366957.3:p.Met836Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2713A>G
  hgvsp: ENSP00000441445.1:p.Met905Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2982A>G
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met915Val
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

1-6528391-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528391
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528391
    reference: chr 1
allele count: 4
allele frequency: 4.172229639519359e-5
allele num: 95872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2505A>T
  hgvsp: ENST00000340850.5:c.2505A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2616A>T
  hgvsp: ENST00000377732.1:c.2616A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2712A>T
  hgvsp: ENST00000535355.1:c.2712A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1707A>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2505A>T
  hgvsp: ENST00000377725.1:c.2505A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2673A>T
  hgvsp: ENST00000400915.3:c.2673A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-438A>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2505A>T
  hgvsp: ENST00000400913.1:c.2505A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2736A>T
  hgvsp: ENST00000377748.1:c.2736A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2505A>T
  hgvsp: ENST00000377728.3:c.2505A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2505A>T
  hgvsp: ENST00000377737.2:c.2505A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2505A>T
  hgvsp: ENST00000544978.1:c.2505A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2742A>T
  hgvsp: ENST00000537245.1:c.2742A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2981A>T
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15477
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro914Pro
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/1-6528407-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528407
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528407
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 95402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2489T>G
  hgvsp: ENSP00000366954.1:p.Phe830Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2489T>G
  hgvsp: ENSP00000344570.5:p.Phe830Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2726T>G
  hgvsp: ENSP00000439625.1:p.Phe909Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2489T>G
  hgvsp: ENSP00000383704.1:p.Phe830Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2965T>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-454T>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2696T>G
  hgvsp: ENSP00000441445.1:p.Phe899Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2489T>G
  hgvsp: ENSP00000366957.3:p.Phe830Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2720T>G
  hgvsp: ENSP00000366977.1:p.Phe907Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2489T>G
  hgvsp: ENSP00000366966.2:p.Phe830Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2657T>G
  hgvsp: ENSP00000383706.3:p.Phe886Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2489T>G
  hgvsp: ENSP00000437710.1:p.Phe830Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2600T>G
  hgvsp: ENSP00000366961.1:p.Phe867Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1691T>G
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10695
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe909Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

1-6528407-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528407
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528407
    reference: chr 1
allele count: 1
allele frequency: 1.04819605459005e-5
allele num: 95402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2489T>C
  hgvsp: ENSP00000366966.2:p.Phe830Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2720T>C
  hgvsp: ENSP00000366977.1:p.Phe907Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2489T>C
  hgvsp: ENSP00000344570.5:p.Phe830Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2489T>C
  hgvsp: ENSP00000366957.3:p.Phe830Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2489T>C
  hgvsp: ENSP00000383704.1:p.Phe830Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2726T>C
  hgvsp: ENSP00000439625.1:p.Phe909Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2965T>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2489T>C
  hgvsp: ENSP00000366954.1:p.Phe830Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2657T>C
  hgvsp: ENSP00000383706.3:p.Phe886Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-454T>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2600T>C
  hgvsp: ENSP00000366961.1:p.Phe867Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2696T>C
  hgvsp: ENSP00000441445.1:p.Phe899Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1691T>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2489T>C
  hgvsp: ENSP00000437710.1:p.Phe830Ser
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe909Ser
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS

http://identifiers.org/exac.variant/1-6528411-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528411
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528411
    reference: chr 1
allele count: 36
allele frequency: 3.777148253068933e-4
allele num: 95310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2653G>T
  hgvsp: ENSP00000383706.3:p.Asp885Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2485G>T
  hgvsp: ENSP00000437710.1:p.Asp829Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2485G>T
  hgvsp: ENSP00000344570.5:p.Asp829Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2961G>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2716G>T
  hgvsp: ENSP00000366977.1:p.Asp906Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2485G>T
  hgvsp: ENSP00000383704.1:p.Asp829Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2692G>T
  hgvsp: ENSP00000441445.1:p.Asp898Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2485G>T
  hgvsp: ENSP00000366954.1:p.Asp829Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2596G>T
  hgvsp: ENSP00000366961.1:p.Asp866Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2485G>T
  hgvsp: ENSP00000366966.2:p.Asp829Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2722G>T
  hgvsp: ENSP00000439625.1:p.Asp908Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2485G>T
  hgvsp: ENSP00000366957.3:p.Asp829Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-458G>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1687G>T
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8486
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16712
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10742
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp908Tyr
num of homozygotes: 1
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

1-6528433-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528433
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528433
    reference: chr 1
allele count: 2
allele frequency: 2.078699565551791e-5
allele num: 96214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1665C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2574C>G
  hgvsp: ENST00000377732.1:c.2574C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2694C>G
  hgvsp: ENST00000377748.1:c.2694C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2463C>G
  hgvsp: ENST00000544978.1:c.2463C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2463C>G
  hgvsp: ENST00000377725.1:c.2463C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2463C>G
  hgvsp: ENST00000377737.2:c.2463C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2700C>G
  hgvsp: ENST00000537245.1:c.2700C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2939C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2463C>G
  hgvsp: ENST00000377728.3:c.2463C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2463C>G
  hgvsp: ENST00000340850.5:c.2463C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2463C>G
  hgvsp: ENST00000400913.1:c.2463C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2670C>G
  hgvsp: ENST00000535355.1:c.2670C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2631C>G
  hgvsp: ENST00000400915.3:c.2631C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-480C>G
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14923
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8724
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr900Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-6528434-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528434
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528434
    reference: chr 1
allele count: 1
allele frequency: 1.036957152930441e-5
allele num: 96436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2462C>T
  hgvsp: ENSP00000344570.5:p.Thr821Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2630C>T
  hgvsp: ENSP00000383706.3:p.Thr877Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1664C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2938C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2573C>T
  hgvsp: ENSP00000366961.1:p.Thr858Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2693C>T
  hgvsp: ENSP00000366977.1:p.Thr898Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2462C>T
  hgvsp: ENSP00000366954.1:p.Thr821Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2462C>T
  hgvsp: ENSP00000366957.3:p.Thr821Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2462C>T
  hgvsp: ENSP00000383704.1:p.Thr821Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2699C>T
  hgvsp: ENSP00000439625.1:p.Thr900Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2462C>T
  hgvsp: ENSP00000366966.2:p.Thr821Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2462C>T
  hgvsp: ENSP00000437710.1:p.Thr821Ile
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-481C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2669C>T
  hgvsp: ENSP00000441445.1:p.Thr890Ile
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8602
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr900Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

1-6528438-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528438
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528438
    reference: chr 1
allele count: 5
allele frequency: 5.187260089220873e-5
allele num: 96390
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2689G>C
  hgvsp: ENSP00000366977.1:p.Gly897Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2569G>C
  hgvsp: ENSP00000366961.1:p.Gly857Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2458G>C
  hgvsp: ENSP00000437710.1:p.Gly820Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2626G>C
  hgvsp: ENSP00000383706.3:p.Gly876Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-485G>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2665G>C
  hgvsp: ENSP00000441445.1:p.Gly889Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2458G>C
  hgvsp: ENSP00000383704.1:p.Gly820Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2458G>C
  hgvsp: ENSP00000366966.2:p.Gly820Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2934G>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1660G>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2458G>C
  hgvsp: ENSP00000366957.3:p.Gly820Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2458G>C
  hgvsp: ENSP00000366954.1:p.Gly820Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2458G>C
  hgvsp: ENSP00000344570.5:p.Gly820Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2695G>C
  hgvsp: ENSP00000439625.1:p.Gly899Arg
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8505
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17699
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6106
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly899Arg
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

1-6528438-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528438
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528438
    reference: chr 1
allele count: 149
allele frequency: 1.54580350658782e-3
allele num: 96390
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2458G>A
  hgvsp: ENSP00000366954.1:p.Gly820Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2458G>A
  hgvsp: ENSP00000366957.3:p.Gly820Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1660G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-485G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2695G>A
  hgvsp: ENSP00000439625.1:p.Gly899Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2458G>A
  hgvsp: ENSP00000366966.2:p.Gly820Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2689G>A
  hgvsp: ENSP00000366977.1:p.Gly897Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2665G>A
  hgvsp: ENSP00000441445.1:p.Gly889Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2458G>A
  hgvsp: ENSP00000344570.5:p.Gly820Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2458G>A
  hgvsp: ENSP00000437710.1:p.Gly820Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2569G>A
  hgvsp: ENSP00000366961.1:p.Gly857Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2458G>A
  hgvsp: ENSP00000383704.1:p.Gly820Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2934G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2626G>A
  hgvsp: ENSP00000383706.3:p.Gly876Ser
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10447
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 17699
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 14538
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6106
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly899Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

1-6528439-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528439
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528439
    reference: chr 1
allele count: 25
allele frequency: 2.600212177313669e-4
allele num: 96146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2568C>T
  hgvsp: ENST00000377732.1:c.2568C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-486C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1659C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2664C>T
  hgvsp: ENST00000535355.1:c.2664C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2457C>T
  hgvsp: ENST00000544978.1:c.2457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2457C>T
  hgvsp: ENST00000340850.5:c.2457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2688C>T
  hgvsp: ENST00000377748.1:c.2688C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2457C>T
  hgvsp: ENST00000377725.1:c.2457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2933C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2457C>T
  hgvsp: ENST00000377728.3:c.2457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2457C>T
  hgvsp: ENST00000377737.2:c.2457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2457C>T
  hgvsp: ENST00000400913.1:c.2457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2625C>T
  hgvsp: ENST00000400915.3:c.2625C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2694C>T
  hgvsp: ENST00000537245.1:c.2694C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8422
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17817
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14348
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10396
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr898Tyr
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS

1-6528442-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528442
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528442
    reference: chr 1
allele count: 2
allele frequency: 2.052713687494868e-5
allele num: 97432
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2454C>G
  hgvsp: ENST00000377737.2:c.2454C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2622C>G
  hgvsp: ENST00000400915.3:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2454C>G
  hgvsp: ENST00000400913.1:c.2454C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2454C>G
  hgvsp: ENST00000544978.1:c.2454C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2930C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2454C>G
  hgvsp: ENST00000377728.3:c.2454C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2565C>G
  hgvsp: ENST00000377732.1:c.2565C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2685C>G
  hgvsp: ENST00000377748.1:c.2685C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1656C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2661C>G
  hgvsp: ENST00000535355.1:c.2661C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2454C>G
  hgvsp: ENST00000340850.5:c.2454C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2691C>G
  hgvsp: ENST00000537245.1:c.2691C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-489C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2454C>G
  hgvsp: ENST00000377725.1:c.2454C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18955
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala897Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

1-6528448-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528448
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528448
    reference: chr 1
allele count: 1
allele frequency: 1.017811704834606e-5
allele num: 98250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2679C>T
  hgvsp: ENST00000377748.1:c.2679C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2448C>T
  hgvsp: ENST00000377725.1:c.2448C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1650C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2655C>T
  hgvsp: ENST00000535355.1:c.2655C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2448C>T
  hgvsp: ENST00000377728.3:c.2448C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2448C>T
  hgvsp: ENST00000340850.5:c.2448C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2924C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2559C>T
  hgvsp: ENST00000377732.1:c.2559C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2448C>T
  hgvsp: ENST00000544978.1:c.2448C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2448C>T
  hgvsp: ENST00000377737.2:c.2448C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2685C>T
  hgvsp: ENST00000537245.1:c.2685C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2448C>T
  hgvsp: ENST00000400913.1:c.2448C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-495C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2616C>T
  hgvsp: ENST00000400915.3:c.2616C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp895Asp
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

1-6528453-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528453
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528453
    reference: chr 1
allele count: 1
allele frequency: 1.012617210442109e-5
allele num: 98754
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2443A>G
  hgvsp: ENSP00000366954.1:p.Met815Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2680A>G
  hgvsp: ENSP00000439625.1:p.Met894Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2443A>G
  hgvsp: ENSP00000344570.5:p.Met815Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2443A>G
  hgvsp: ENSP00000366966.2:p.Met815Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2443A>G
  hgvsp: ENSP00000437710.1:p.Met815Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2611A>G
  hgvsp: ENSP00000383706.3:p.Met871Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2674A>G
  hgvsp: ENSP00000366977.1:p.Met892Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2443A>G
  hgvsp: ENSP00000366957.3:p.Met815Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2554A>G
  hgvsp: ENSP00000366961.1:p.Met852Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2443A>G
  hgvsp: ENSP00000383704.1:p.Met815Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2919A>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-500A>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2650A>G
  hgvsp: ENSP00000441445.1:p.Met884Val
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1645A>G
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met894Val
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-6528458-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528458
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528458
    reference: chr 1
allele count: 1
allele frequency: 1.01050929668553e-5
allele num: 98960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2438G>A
  hgvsp: ENSP00000366954.1:p.Cys813Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2669G>A
  hgvsp: ENSP00000366977.1:p.Cys890Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2438G>A
  hgvsp: ENSP00000437710.1:p.Cys813Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2606G>A
  hgvsp: ENSP00000383706.3:p.Cys869Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2549G>A
  hgvsp: ENSP00000366961.1:p.Cys850Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2438G>A
  hgvsp: ENSP00000344570.5:p.Cys813Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2914G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2438G>A
  hgvsp: ENSP00000366966.2:p.Cys813Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2645G>A
  hgvsp: ENSP00000441445.1:p.Cys882Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2438G>A
  hgvsp: ENSP00000383704.1:p.Cys813Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2438G>A
  hgvsp: ENSP00000366957.3:p.Cys813Tyr
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1640G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-505G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2675G>A
  hgvsp: ENSP00000439625.1:p.Cys892Tyr
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys892Tyr
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

1-6528461-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528461
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528461
    reference: chr 1
allele count: 2
allele frequency: 2.005374403401115e-5
allele num: 99732
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2435C>T
  hgvsp: ENSP00000366957.3:p.Ser812Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2435C>T
  hgvsp: ENSP00000366954.1:p.Ser812Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2435C>T
  hgvsp: ENSP00000344570.5:p.Ser812Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2911C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2672C>T
  hgvsp: ENSP00000439625.1:p.Ser891Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2666C>T
  hgvsp: ENSP00000366977.1:p.Ser889Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2642C>T
  hgvsp: ENSP00000441445.1:p.Ser881Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2435C>T
  hgvsp: ENSP00000383704.1:p.Ser812Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2546C>T
  hgvsp: ENSP00000366961.1:p.Ser849Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2603C>T
  hgvsp: ENSP00000383706.3:p.Ser868Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2435C>T
  hgvsp: ENSP00000366966.2:p.Ser812Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1637C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2435C>T
  hgvsp: ENSP00000437710.1:p.Ser812Phe
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-508C>T
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9407
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21363
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser891Phe
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

1-6528463-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528463
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528463
    reference: chr 1
allele count: 1
allele frequency: 9.992006394884094e-6
allele num: 100080
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2433C>G
  hgvsp: ENST00000544978.1:c.2433C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2601C>G
  hgvsp: ENST00000400915.3:c.2601C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2433C>G
  hgvsp: ENST00000377725.1:c.2433C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2909C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2433C>G
  hgvsp: ENST00000377737.2:c.2433C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2433C>G
  hgvsp: ENST00000377728.3:c.2433C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1635C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2664C>G
  hgvsp: ENST00000377748.1:c.2664C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-510C>G
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2544C>G
  hgvsp: ENST00000377732.1:c.2544C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2433C>G
  hgvsp: ENST00000400913.1:c.2433C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2670C>G
  hgvsp: ENST00000537245.1:c.2670C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2640C>G
  hgvsp: ENST00000535355.1:c.2640C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2433C>G
  hgvsp: ENST00000340850.5:c.2433C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21724
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg890Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

1-6528465-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528465
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528465
    reference: chr 1
allele count: 29
allele frequency: 2.88333432758655e-4
allele num: 100578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-512C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2907C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2431C>T
  hgvsp: ENSP00000366957.3:p.Arg811Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2599C>T
  hgvsp: ENSP00000383706.3:p.Arg867Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2431C>T
  hgvsp: ENSP00000437710.1:p.Arg811Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2431C>T
  hgvsp: ENSP00000366966.2:p.Arg811Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2542C>T
  hgvsp: ENSP00000366961.1:p.Arg848Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2431C>T
  hgvsp: ENSP00000344570.5:p.Arg811Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2638C>T
  hgvsp: ENSP00000441445.1:p.Arg880Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2662C>T
  hgvsp: ENSP00000366977.1:p.Arg888Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1633C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2431C>T
  hgvsp: ENSP00000366954.1:p.Arg811Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2431C>T
  hgvsp: ENSP00000383704.1:p.Arg811Cys
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2668C>T
  hgvsp: ENSP00000439625.1:p.Arg890Cys
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22385
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11333
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8984
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8002
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6477
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Arg890Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

1-6528468-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528468
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528468
    reference: chr 1
allele count: 6353
allele frequency: 6.206768533354175e-2
allele num: 102356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2635G>A
  hgvsp: ENSP00000441445.1:p.Gly879Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2539G>A
  hgvsp: ENSP00000366961.1:p.Gly847Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2665G>A
  hgvsp: ENSP00000439625.1:p.Gly889Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2428G>A
  hgvsp: ENSP00000383704.1:p.Gly810Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2659G>A
  hgvsp: ENSP00000366977.1:p.Gly887Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2428G>A
  hgvsp: ENSP00000344570.5:p.Gly810Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2428G>A
  hgvsp: ENSP00000366957.3:p.Gly810Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2904G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-515G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2428G>A
  hgvsp: ENSP00000366954.1:p.Gly810Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1630G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2428G>A
  hgvsp: ENSP00000366966.2:p.Gly810Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2596G>A
  hgvsp: ENSP00000383706.3:p.Gly866Ser
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2428G>A
  hgvsp: ENSP00000437710.1:p.Gly810Ser
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 7972
  bin: 7.5e0
  variant carriers: 225
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 8450
  bin: 2.75e1
  variant carriers: 944
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 366
genotype depth: GenotypeDepth
  all individuals: 10434
  bin: 1.25e1
  variant carriers: 839
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 6822
  bin: 1.75e1
  variant carriers: 1337
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 21972
  bin: 2.25e1
  variant carriers: 1328
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
hgvs: p.Gly889Ser
num of homozygotes: 213
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-6528469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528469
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528469
    reference: chr 1
allele count: 14
allele frequency: 1.356615438283688e-4
allele num: 103198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2903C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2427C>T
  hgvsp: ENST00000377725.1:c.2427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2664C>T
  hgvsp: ENST00000537245.1:c.2664C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-516C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2427C>T
  hgvsp: ENST00000340850.5:c.2427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2658C>T
  hgvsp: ENST00000377748.1:c.2658C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1629C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2427C>T
  hgvsp: ENST00000544978.1:c.2427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2427C>T
  hgvsp: ENST00000400913.1:c.2427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2538C>T
  hgvsp: ENST00000377732.1:c.2538C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2595C>T
  hgvsp: ENST00000400915.3:c.2595C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2427C>T
  hgvsp: ENST00000377737.2:c.2427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2634C>T
  hgvsp: ENST00000535355.1:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2427C>T
  hgvsp: ENST00000377728.3:c.2427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10027
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22738
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8818
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp888Asp
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-6528472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528472
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528472
    reference: chr 1
allele count: 7
allele frequency: 6.732063858434315e-5
allele num: 103980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2535G>A
  hgvsp: ENST00000377732.1:c.2535G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2661G>A
  hgvsp: ENST00000537245.1:c.2661G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2424G>A
  hgvsp: ENST00000377728.3:c.2424G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1626G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2655G>A
  hgvsp: ENST00000377748.1:c.2655G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-519G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2424G>A
  hgvsp: ENST00000544978.1:c.2424G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2424G>A
  hgvsp: ENST00000400913.1:c.2424G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2424G>A
  hgvsp: ENST00000377737.2:c.2424G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2424G>A
  hgvsp: ENST00000340850.5:c.2424G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2424G>A
  hgvsp: ENST00000377725.1:c.2424G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2631G>A
  hgvsp: ENST00000535355.1:c.2631G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2592G>A
  hgvsp: ENST00000400915.3:c.2592G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2900G>A
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5897
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23710
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val887Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-6528475-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528475
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528475
    reference: chr 1
allele count: 2
allele frequency: 1.916112590775834e-5
allele num: 104378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2421G>C
  hgvsp: ENST00000340850.5:c.2421G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2421G>C
  hgvsp: ENST00000400913.1:c.2421G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2421G>C
  hgvsp: ENST00000377728.3:c.2421G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2652G>C
  hgvsp: ENST00000377748.1:c.2652G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2421G>C
  hgvsp: ENST00000377725.1:c.2421G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2532G>C
  hgvsp: ENST00000377732.1:c.2532G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2628G>C
  hgvsp: ENST00000535355.1:c.2628G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2421G>C
  hgvsp: ENST00000377737.2:c.2421G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2589G>C
  hgvsp: ENST00000400915.3:c.2589G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-522G>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2897G>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2421G>C
  hgvsp: ENST00000544978.1:c.2421G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2658G>C
  hgvsp: ENST00000537245.1:c.2658G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1623G>C
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8825
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro886Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum

1-6528475-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528475
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528475
    reference: chr 1
allele count: 2
allele frequency: 1.916112590775834e-5
allele num: 104378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2628G>A
  hgvsp: ENST00000535355.1:c.2628G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2421G>A
  hgvsp: ENST00000400913.1:c.2421G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2421G>A
  hgvsp: ENST00000377725.1:c.2421G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2652G>A
  hgvsp: ENST00000377748.1:c.2652G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2421G>A
  hgvsp: ENST00000377737.2:c.2421G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2897G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1623G>A
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2532G>A
  hgvsp: ENST00000377732.1:c.2532G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2658G>A
  hgvsp: ENST00000537245.1:c.2658G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2421G>A
  hgvsp: ENST00000340850.5:c.2421G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2421G>A
  hgvsp: ENST00000377728.3:c.2421G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2421G>A
  hgvsp: ENST00000544978.1:c.2421G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2589G>A
  hgvsp: ENST00000400915.3:c.2589G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-522G>A
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro886Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-6528476-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528476
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528476
    reference: chr 1
allele count: 1
allele frequency: 9.533251982916412e-6
allele num: 104896
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2588C>T
  hgvsp: ENSP00000383706.3:p.Pro863Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2420C>T
  hgvsp: ENSP00000366957.3:p.Pro807Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1622C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2531C>T
  hgvsp: ENSP00000366961.1:p.Pro844Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2420C>T
  hgvsp: ENSP00000344570.5:p.Pro807Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2420C>T
  hgvsp: ENSP00000383704.1:p.Pro807Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2420C>T
  hgvsp: ENSP00000366954.1:p.Pro807Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2896C>T
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2657C>T
  hgvsp: ENSP00000439625.1:p.Pro886Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2420C>T
  hgvsp: ENSP00000366966.2:p.Pro807Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2651C>T
  hgvsp: ENSP00000366977.1:p.Pro884Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2627C>T
  hgvsp: ENSP00000441445.1:p.Pro876Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2420C>T
  hgvsp: ENSP00000437710.1:p.Pro807Leu
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-523C>T
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9623
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro886Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

1-6528496-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528496
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528496
    reference: chr 1
allele count: 1
allele frequency: 9.098518761145685e-6
allele num: 109908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2607T>C
  hgvsp: ENST00000535355.1:c.2607T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2876T>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2400T>C
  hgvsp: ENST00000400913.1:c.2400T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2631T>C
  hgvsp: ENST00000377748.1:c.2631T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2568T>C
  hgvsp: ENST00000400915.3:c.2568T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2400T>C
  hgvsp: ENST00000377737.2:c.2400T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2400T>C
  hgvsp: ENST00000544978.1:c.2400T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-543T>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2400T>C
  hgvsp: ENST00000377725.1:c.2400T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2400T>C
  hgvsp: ENST00000377728.3:c.2400T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2511T>C
  hgvsp: ENST00000377732.1:c.2511T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1602T>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2400T>C
  hgvsp: ENST00000340850.5:c.2400T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2637T>C
  hgvsp: ENST00000537245.1:c.2637T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser879Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

1-6528498-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6528498
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 6528498
    reference: chr 1
allele count: 1
allele frequency: 9.073586788857636e-6
allele num: 110210
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000439625
  ensembl transcript: ENST00000537245
  gene symbol: PLEKHG5
  hgvsc: ENST00000537245.1:c.2635A>C
  hgvsp: ENSP00000439625.1:p.Ser879Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000344570
  ensembl transcript: ENST00000340850
  gene symbol: PLEKHG5
  hgvsc: ENST00000340850.5:c.2398A>C
  hgvsp: ENSP00000344570.5:p.Ser800Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366954
  ensembl transcript: ENST00000377725
  gene symbol: PLEKHG5
  hgvsc: ENST00000377725.1:c.2398A>C
  hgvsp: ENSP00000366954.1:p.Ser800Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366969
  ensembl transcript: ENST00000377740
  gene symbol: PLEKHG5
  hgvsc: ENST00000377740.3:c.2481-545A>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000489097
  gene symbol: PLEKHG5
  hgvsc: ENST00000489097.1:n.2874A>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366977
  ensembl transcript: ENST00000377748
  gene symbol: PLEKHG5
  hgvsc: ENST00000377748.1:c.2629A>C
  hgvsp: ENSP00000366977.1:p.Ser877Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366961
  ensembl transcript: ENST00000377732
  gene symbol: PLEKHG5
  hgvsc: ENST00000377732.1:c.2509A>C
  hgvsp: ENSP00000366961.1:p.Ser837Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000441445
  ensembl transcript: ENST00000535355
  gene symbol: PLEKHG5
  hgvsc: ENST00000535355.1:c.2605A>C
  hgvsp: ENSP00000441445.1:p.Ser869Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171680
  ensembl transcript: ENST00000487949
  gene symbol: PLEKHG5
  hgvsc: ENST00000487949.1:n.1600A>C
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366957
  ensembl transcript: ENST00000377728
  gene symbol: PLEKHG5
  hgvsc: ENST00000377728.3:c.2398A>C
  hgvsp: ENSP00000366957.3:p.Ser800Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383706
  ensembl transcript: ENST00000400915
  gene symbol: PLEKHG5
  hgvsc: ENST00000400915.3:c.2566A>C
  hgvsp: ENSP00000383706.3:p.Ser856Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000366966
  ensembl transcript: ENST00000377737
  gene symbol: PLEKHG5
  hgvsc: ENST00000377737.2:c.2398A>C
  hgvsp: ENSP00000366966.2:p.Ser800Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000383704
  ensembl transcript: ENST00000400913
  gene symbol: PLEKHG5
  hgvsc: ENST00000400913.1:c.2398A>C
  hgvsp: ENSP00000383704.1:p.Ser800Arg
  variant of: http://identifiers.org/hgnc/29105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171680
  ensembl protein: ENSP00000437710
  ensembl transcript: ENST00000544978
  gene symbol: PLEKHG5
  hgvsc: ENST00000544978.1:c.2398A>C
  hgvsp: ENSP00000437710.1:p.Ser800Arg
  variant of: http://identifiers.org/hgnc/29105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4849
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser879Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS

GenotypeDepth
all individuals: 2716
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3801
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 137
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24350
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18410
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1928
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4239
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1929
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.380071763731714e-4
allele num: 7246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45760
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.413627367825841e-4
allele num: 7074
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e-1

FS
type: SiteQuality
SIO_000300: 1.008e0

QD
type: SiteQuality
SIO_000300: 1.061e1

DP
type: SiteQuality
SIO_000300: 9.48743e5

GenotypeDepth
all individuals: 24762
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 973
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1721
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27109
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1176
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15973
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4261
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7926
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.076239514990449e-5
allele num: 48164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3422
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.16e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.67e0

MQ
type: SiteQuality
SIO_000300: 5.674e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

FS
type: SiteQuality
SIO_000300: 8.486000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

DP
type: SiteQuality
SIO_000300: 9.89889e5

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2102
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30178
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1566
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4161
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14672
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.995928306255239e-5
allele num: 50102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6978
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.025489e6

FS
type: SiteQuality
SIO_000300: 5.454e0

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.876e0

QD
type: SiteQuality
SIO_000300: 1.579e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2215
bin: 1.75e1
variant carriers: 2

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4149
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 978
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2537
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14170
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1545
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30147
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.961965134706815e-5
allele num: 50480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7054
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8718
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.226e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.183e0

DP
type: SiteQuality
SIO_000300: 1.030687e6

FS
type: SiteQuality
SIO_000300: 1.491e0

MQRankSum
type: SiteQuality
SIO_000300: -2.41e-1

QD
type: SiteQuality
SIO_000300: 8.35e0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2314
bin: 1.75e1
variant carriers: 2

GenotypeDepth
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1506
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 474
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 661
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13630
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30070
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7126
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.081664098613251e-4
allele num: 6490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3772
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.152e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

VQSLOD
type: SiteQuality
SIO_000300: 8.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

DP
type: SiteQuality
SIO_000300: 1.039652e6

GenotypeDepth
all individuals: 2206
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1110
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7536
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12899
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4067
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30657
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12922
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 125
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9064
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.446e1

DP
type: SiteQuality
SIO_000300: 1.05109e6

GenotypeDepth
all individuals: 3900
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1406
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1515
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 928
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2785
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12875
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 31163
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 22
allele frequency: 3.322259136212625e-3
allele num: 6622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.881384878124515e-5
allele num: 51528
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.096010521701008e-4
allele num: 9124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.305e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-3

DP
type: SiteQuality
SIO_000300: 1.055647e6

VQSLOD
type: SiteQuality
SIO_000300: 2.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.169e1

GenotypeDepth
all individuals: 5
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12556
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1376
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12791
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2808
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31671
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4028
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7968
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.504211793020457e-4
allele num: 6648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51744
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.001e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 1.059584e6

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 3.393e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.35e-1

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 931
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2850
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30806
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3820
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1398
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11225
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.895518993100311e-5
allele num: 52756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

MQ
type: SiteQuality
SIO_000300: 5.889e1

VQSLOD
type: SiteQuality
SIO_000300: -6.997e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.51e-1

DP
type: SiteQuality
SIO_000300: 1.079974e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

QD
type: SiteQuality
SIO_000300: 9.94e0

GenotypeDepth
all individuals: 140
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9328
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1634
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3475
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3044
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11394
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34633
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1086
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8222
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.417233560090703e-4
allele num: 7056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.115052e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

QD
type: SiteQuality
SIO_000300: 1.487e1

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

GenotypeDepth
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1526
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32218
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38650
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2737
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 336
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7994
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.521870817778404e-5
allele num: 56788
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.21e-1

QD
type: SiteQuality
SIO_000300: 1.091e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

FS
type: SiteQuality
SIO_000300: 1.0845e1

VQSLOD
type: SiteQuality
SIO_000300: -1.101e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.81e-1

DP
type: SiteQuality
SIO_000300: 1.182564e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.215e0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 10
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9234
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39007
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2680
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3385
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 563
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4936
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.250312578144536e-4
allele num: 7998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.75617294791191e-5
allele num: 56942
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10580
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.22e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 1.184678e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

QD
type: SiteQuality
SIO_000300: 1.123e1

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 825
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3445
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39526
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8924
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.808462834675154e-4
allele num: 10682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5056
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9234
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.197392e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

QD
type: SiteQuality
SIO_000300: 1.251e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.67e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 1.514e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 11
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 806
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 228
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 550
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39902
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 630
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2416
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9066
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 165
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 320
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 7
allele frequency: 7.530120481927711e-4
allele num: 9296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8096
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.916042501306393e-4
allele num: 57410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5062
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 1.026502426278462e-3
allele num: 10716
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.904216553878188e-4
allele num: 7684
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.1e0

QD
type: SiteQuality
SIO_000300: 1.164e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

FS
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 1.200827e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 8484
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 806
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2416
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9066
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39902
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.741856819369448e-5
allele num: 57410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 1.200827e6

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.164e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.1e0

GenotypeDepth
all individuals: 4034
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 31
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 29
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1757
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 240
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38105
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9817
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3460
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.75e1
variant carriers: 5

African
type: Population
allele count: 5
allele frequency: 6.353240152477764e-4
allele num: 7870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

DP
type: SiteQuality
SIO_000300: 1.203146e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.862e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

QD
type: SiteQuality
SIO_000300: 1.013e1

GenotypeDepth
all individuals: 1668
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11454
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38092
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1724
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 362
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9861
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3441
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.462963604252519e-5
allele num: 57754
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.230012300123001e-4
allele num: 8130
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.340556697179151e-5
allele num: 10706
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 7.62970498474059e-4
allele num: 7864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.081e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

DP
type: SiteQuality
SIO_000300: 1.20412e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

FS
type: SiteQuality
SIO_000300: 1.143e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1611
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10041
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38225
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 509
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3459
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8132
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.27000254000508e-4
allele num: 7874
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.971220185294697e-4
allele num: 10146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.460207612456748e-5
allele num: 57800
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.206e0

QD
type: SiteQuality
SIO_000300: 1.262e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.1e0

DP
type: SiteQuality
SIO_000300: 1.204915e6

MQ
type: SiteQuality
SIO_000300: 5.862e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.86e-1

GenotypeDepth
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30327
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1521
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1378
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10582
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3442
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37739
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.457336467985064e-5
allele num: 57848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10658
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.097e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.201936e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.505e0

FS
type: SiteQuality
SIO_000300: 6.59e-1

QD
type: SiteQuality
SIO_000300: 1.168e1

GenotypeDepth
all individuals: 51
bin: 5.25e1
variant carriers: 22

GenotypeDepth
all individuals: 20
bin: 6.75e1
variant carriers: 15

GenotypeDepth
all individuals: 1421
bin: 2.5e0
variant carriers: 3

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 7

GenotypeDepth
all individuals: 7
bin: 8.25e1
variant carriers: 6

GenotypeDepth
all individuals: 18
bin: 9.75e1
variant carriers: 13

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 11

GenotypeDepth
all individuals: 2304
bin: 1.75e1
variant carriers: 60

GenotypeQuality
all individuals: 696
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 427
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 281
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11066
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 35546
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 451
bin: 7.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1531
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 890
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1612
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3281
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1698
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 142
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 478
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 508
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 351
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 606
bin: 9.75e1
variant carriers: 478

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10942
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.233162587744261e-3
allele num: 10542
num of homozygotes: 0

African
type: Population
allele count: 484
allele frequency: 6.084988684938396e-2
allele num: 7954
num of homozygotes: 13

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8052
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.457725947521866e-3
allele num: 686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4988
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.207971668634123e-5
allele num: 57604
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

DP
type: SiteQuality
SIO_000300: 1.194515e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

QD
type: SiteQuality
SIO_000300: 1.276e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 3
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1560
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1724
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3034
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12030
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2357
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1773
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 871
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31762
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4806
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.055611729019212e-4
allele num: 7912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.761121482159839e-5
allele num: 56782
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.289324394017535e-4
allele num: 7756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

QD
type: SiteQuality
SIO_000300: 1.197e1

FS
type: SiteQuality
SIO_000300: 6.889e0

DP
type: SiteQuality
SIO_000300: 1.15705e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

GenotypeDepth
all individuals: 1697
bin: 3.25e1
variant carriers: 11

GenotypeDepth
all individuals: 6
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 3
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10990
bin: 2.75e1
variant carriers: 30

GenotypeDepth
all individuals: 10
bin: 6.75e1
variant carriers: 3

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 660
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12209
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 541
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 245
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2389
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3131
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1380
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1723
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 654
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 438
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2419
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 9.75e1
variant carriers: 123

GenotypeQuality
all individuals: 32360
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.437394532568343e-5
allele num: 11852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

African
type: Population
allele count: 121
allele frequency: 1.5504869297796e-2
allele num: 7804
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.026666198222253e-5
allele num: 56926
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.922837100545596e-4
allele num: 10264
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 5.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.397e1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

DP
type: SiteQuality
SIO_000300: 1.15765e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 8608
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1588
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30035
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1792
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2697
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12400
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2968
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1568
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2709
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 833
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4746
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.773364071643909e-5
allele num: 56390
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

QD
type: SiteQuality
SIO_000300: 1.247e1

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: 5.08e-1

DP
type: SiteQuality
SIO_000300: 1.140232e6

GenotypeDepth
all individuals: 7
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24942
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1667
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1592
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1599
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 912
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2736
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1774
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30115
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3069
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2773
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12495
bin: 2.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4756
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.859988168014199e-5
allele num: 10142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.316886431305827e-5
allele num: 56424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.179e0

DP
type: SiteQuality
SIO_000300: 1.139013e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.12e0

FS
type: SiteQuality
SIO_000300: 1.159e1

QD
type: SiteQuality
SIO_000300: 1.162e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

GenotypeDepth
all individuals: 6
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3802
bin: 1.75e1
variant carriers: 2

GenotypeDepth
all individuals: 9073
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25045
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1779
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 590
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 809
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3055
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12572
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7870
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.539697709815581e-5
allele num: 56502
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.111615833874107e-5
allele num: 12328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.3277e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.13e-1

QD
type: SiteQuality
SIO_000300: 9.52e0

VQSLOD
type: SiteQuality
SIO_000300: -1.789e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

DP
type: SiteQuality
SIO_000300: 1.139658e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.452e0

GenotypeDepth
all individuals: 1713
bin: 3.25e1
variant carriers: 74

GenotypeDepth
all individuals: 1568
bin: 2.5e0
variant carriers: 3

GenotypeDepth
all individuals: 56
bin: 4.75e1
variant carriers: 31

GenotypeDepth
all individuals: 68
bin: 5.25e1
variant carriers: 36

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3
bin: 8.25e1
variant carriers: 2

GenotypeDepth
all individuals: 9128
bin: 1.25e1
variant carriers: 113

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 15

GenotypeQuality
all individuals: 1774
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 332
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2700
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 416
bin: 7.75e1
variant carriers: 12

GenotypeQuality
all individuals: 345
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 9.25e1
variant carriers: 12

GenotypeQuality
all individuals: 800
bin: 4.75e1
variant carriers: 11

GenotypeQuality
all individuals: 619
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 12358
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 30552
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 2919
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 580
bin: 1.75e1
variant carriers: 8

GenotypeQuality
all individuals: 453
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 852
bin: 9.75e1
variant carriers: 715

GenotypeQuality
all individuals: 1523
bin: 3.75e1
variant carriers: 7

GenotypeQuality
all individuals: 133
bin: 8.25e1
variant carriers: 10

GenotypeQuality
all individuals: 629
bin: 7.25e1
variant carriers: 9

GenotypeQuality
all individuals: 752
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 2684
bin: 3.25e1
variant carriers: 7

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4738
num of homozygotes: 0

Latino
type: Population
allele count: 51
allele frequency: 5.061532354108773e-3
allele num: 10076
num of homozygotes: 1

Other
type: Population
allele count: 3
allele frequency: 4.411764705882353e-3
allele num: 680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.721820501914079e-4
allele num: 56424
num of homozygotes: 0

African
type: Population
allele count: 722
allele frequency: 9.265913757700206e-2
allele num: 7792
num of homozygotes: 34

South Asian
type: Population
allele count: 7
allele frequency: 5.694760820045558e-4
allele num: 12292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.06e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.207e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 1.351e1

DP
type: SiteQuality
SIO_000300: 1.148489e6

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3912
bin: 1.75e1
variant carriers: 7

GenotypeDepth
all individuals: 5
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12753
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3076
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30517
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 9.75e1
variant carriers: 31

GenotypeQuality
all individuals: 50
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 511
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 7.75e1
variant carriers: 1

African
type: Population
allele count: 4
allele frequency: 5.161290322580645e-4
allele num: 7750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 3.365452741958339e-4
allele num: 56456
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.949852507374631e-3
allele num: 678
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.872775940796725e-5
allele num: 12702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4728
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.955926146515784e-4
allele num: 10074
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.136875e6

FS
type: SiteQuality
SIO_000300: 1.144e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-1

QD
type: SiteQuality
SIO_000300: 1.265e1

GenotypeDepth
all individuals: 9911
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1682
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1796
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27349
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2769
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12982
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 136
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.78788528927984e-5
allele num: 55932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

FS
type: SiteQuality
SIO_000300: 2.836e0

QD
type: SiteQuality
SIO_000300: 9.130000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.41e0

VQSLOD
type: SiteQuality
SIO_000300: 8.1e-2

DP
type: SiteQuality
SIO_000300: 1.118137e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.567e0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1690
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1691
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1828
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 414
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13058
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 28520
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2704
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3177
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3166
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.582945180938732e-5
allele num: 55820
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7772
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12898
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.012477359629704e-4
allele num: 9938
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

FS
type: SiteQuality
SIO_000300: 5.825e0

DP
type: SiteQuality
SIO_000300: 1.118846e6

QD
type: SiteQuality
SIO_000300: 8.99e0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1653
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9450
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 159
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 652
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1901
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1923
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27423
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13257
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2714
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.795977011494253e-5
allele num: 55680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4602
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.583311805734952e-4
allele num: 7742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13140
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.68e-2

FS
type: SiteQuality
SIO_000300: 8.5e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

DP
type: SiteQuality
SIO_000300: 1.110348e6

VQSLOD
type: SiteQuality
SIO_000300: 3.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

QD
type: SiteQuality
SIO_000300: 1.278e1

GenotypeDepth
all individuals: 8703
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10601
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1653
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 21
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13257
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1901
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27423
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1923
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7742
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55680
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.5220700152207e-4
allele num: 13140
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

VQSLOD
type: SiteQuality
SIO_000300: 3.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.68e-2

MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
SIO_000300: 8.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 1.110348e6

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23244
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 177
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13257
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27423
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1901
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1923
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.021427127552052e-4
allele num: 9894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55680
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

DP
type: SiteQuality
SIO_000300: 1.110348e6

QD
type: SiteQuality
SIO_000300: 1.278e1

VQSLOD
type: SiteQuality
SIO_000300: 3.6e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
SIO_000300: 8.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.68e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

GenotypeDepth
all individuals: 5029
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2637
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3463
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13428
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 850
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26757
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.808056700658132e-5
allele num: 55308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7560
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.139e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

DP
type: SiteQuality
SIO_000300: 1.101701e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

FS
type: SiteQuality
SIO_000300: 3.309e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 8.869999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 5.44e-1

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8824
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5222
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3594
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2087
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13516
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1904
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3542
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.322051824431518e-4
allele num: 7564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.811791136717759e-5
allele num: 55194
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.307873397855088e-4
allele num: 7646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.022494887525562e-4
allele num: 9780
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

DP
type: SiteQuality
SIO_000300: 1.094849e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.694e0

MQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

FS
type: SiteQuality
SIO_000300: 6.860000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.19e-1

QD
type: SiteQuality
SIO_000300: 1.643e1

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8907
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5610
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3725
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2223
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14013
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3834
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1098
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2873
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.315097317201473e-4
allele num: 7604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.59e-1

FS
type: SiteQuality
SIO_000300: 7.404e0

DP
type: SiteQuality
SIO_000300: 1.083489e6

VQSLOD
type: SiteQuality
SIO_000300: -1.853e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

MQ
type: SiteQuality
SIO_000300: 5.805e1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1454
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4333
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21875
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4264
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14843
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 723
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2658
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.078981441519206e-4
allele num: 9268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.482579688658265e-4
allele num: 53960
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.895600606812854e-5
allele num: 14502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.125e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

FS
type: SiteQuality
SIO_000300: 2.608e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

DP
type: SiteQuality
SIO_000300: 1.051939e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.026e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-2

GenotypeDepth
all individuals: 20073
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 200
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 793
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4237
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22824
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4299
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2584
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2064
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 95
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15089
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.847063169560399e-5
allele num: 54140
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7342
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1494e1

VQSLOD
type: SiteQuality
SIO_000300: -1.602e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.197e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.053555e6

MQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

QD
type: SiteQuality
SIO_000300: 9.66e0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6947
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1372
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20852
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4504
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2468
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4482
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2108
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.71540033438603e-5
allele num: 53830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7542
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.089087344805053e-4
allele num: 9182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.508e0

QD
type: SiteQuality
SIO_000300: 1.148e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.038675e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.75e-1

GenotypeDepth
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 214
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4660
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19494
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15360
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4696
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2406
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7552
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.819421713038734e-5
allele num: 14664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.317e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

DP
type: SiteQuality
SIO_000300: 1.027014e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

FS
type: SiteQuality
SIO_000300: 1.478e0

VQSLOD
type: SiteQuality
SIO_000300: -5.057e-1

QD
type: SiteQuality
SIO_000300: 7.56e0

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6658
bin: 2.75e1
variant carriers: 3

GenotypeDepth
all individuals: 14483
bin: 1.25e1
variant carriers: 4

GenotypeDepth
all individuals: 7
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 720
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 641
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4659
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2372
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2855
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2261
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 295
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4692
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15585
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 19719
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.336541031809677e-4
allele num: 7482
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.123090745732255e-4
allele num: 8904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.454590083456063e-4
allele num: 4074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7114
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14674
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 3.20912145580851e-4
allele num: 52974
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.021812e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

QD
type: SiteQuality
SIO_000300: 1.248e1

FS
type: SiteQuality
SIO_000300: 2.574e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.45e-1

GenotypeDepth
all individuals: 1963
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5092
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3078
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4989
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18949
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16448
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 111
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.885725061286065e-5
allele num: 53030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7046
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4082
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7566
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

FS
type: SiteQuality
SIO_000300: 1.596e0

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

DP
type: SiteQuality
SIO_000300: 1.005144e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.781e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 1303
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 10280
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 217
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6326
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2391
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 675
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18789
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5015
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16471
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53018
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 5.272871078302136e-4
allele num: 7586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7056
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.003676e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.119e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.87e0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15654
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5518
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16284
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1208
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16450
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5205
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2336
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6980
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8682
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

DP
type: SiteQuality
SIO_000300: 9.88341e5

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

GenotypeDepth
all individuals: 15654
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10695
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1283
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16450
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 706
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5205
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5518
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16284
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2336
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.894800666969835e-5
allele num: 52776
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

VQSLOD
type: SiteQuality
SIO_000300: 6.0e-2

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

DP
type: SiteQuality
SIO_000300: 9.88341e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 15552
bin: 1.25e1
variant carriers: 8

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 6.75e1
variant carriers: 2

GenotypeDepth
all individuals: 78
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 8
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3431
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1522
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5164
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 132
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 630
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16723
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17226
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 707
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5470
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2005
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 9.75e1
variant carriers: 31

GenotypeQuality
all individuals: 1210
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 392
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 667
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 9
allele frequency: 6.161007667031764e-4
allele num: 14608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8686
num of homozygotes: 0

East Asian
type: Population
allele count: 26
allele frequency: 3.733486502010339e-3
allele num: 6964
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.896813353566009e-5
allele num: 52720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7596
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.90892e5

MQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

QD
type: SiteQuality
SIO_000300: 1.068e1

GenotypeDepth
all individuals: 17215
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1385
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 265
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16247
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1599
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5432
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1485
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16922
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2570
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53278
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.871088142405972e-4
allele num: 6966
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.556e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

DP
type: SiteQuality
SIO_000300: 1.008108e6

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

FS
type: SiteQuality
SIO_000300: 1.485e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

GenotypeDepth
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 237
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2607
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1575
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17610
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16331
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3518
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5080
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5404
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.872799460633755e-5
allele num: 53396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8750
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4198
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.416e0

QD
type: SiteQuality
SIO_000300: 1.801e1

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.064e0

DP
type: SiteQuality
SIO_000300: 1.010492e6

VQSLOD
type: SiteQuality
SIO_000300: -3.979e-1

FS
type: SiteQuality
SIO_000300: 2.302e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1477
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 14538
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5271
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17439
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4953
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 798
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16005
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7774
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 7.140816909454442e-4
allele num: 7002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4194
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.023997e6

VQSLOD
type: SiteQuality
SIO_000300: 5.33e0

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.49e-2

QD
type: SiteQuality
SIO_000300: 1.288e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

GenotypeDepth
all individuals: 13
bin: 7.75e1
variant carriers: 9

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 5

GenotypeDepth
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8505
bin: 1.75e1
variant carriers: 28

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 18

GenotypeDepth
all individuals: 41
bin: 4.75e1
variant carriers: 3

GenotypeDepth
all individuals: 22
bin: 5.75e1
variant carriers: 3

GenotypeDepth
all individuals: 7
bin: 8.25e1
variant carriers: 6

GenotypeDepth
all individuals: 3
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 7

GenotypeDepth
all individuals: 234
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3480
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16005
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 9.75e1
variant carriers: 146

GenotypeQuality
all individuals: 928
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4953
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17439
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5271
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 748
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1340
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 4.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.873992728908212e-5
allele num: 53362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4194
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.466275659824047e-3
allele num: 682
num of homozygotes: 0

South Asian
type: Population
allele count: 146
allele frequency: 9.956355701036552e-3
allele num: 14664
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.28633907898122e-4
allele num: 7774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7002
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.288e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.49e-2

DP
type: SiteQuality
SIO_000300: 1.023997e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 15
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6311
bin: 2.75e1
variant carriers: 4

GenotypeDepth
all individuals: 6
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 14
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1530
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4853
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17549
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15879
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3435
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 447
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 758
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.479289940828402e-3
allele num: 676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.386634844868735e-4
allele num: 4190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 3.007971123477215e-4
allele num: 53192
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.869440459110473e-4
allele num: 6970
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.405994550408719e-4
allele num: 14680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8666
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.030617e6

VQSLOD
type: SiteQuality
SIO_000300: 3.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 6464
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1212
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19661
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4995
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1374
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 149
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15952
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4686
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1438
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2899
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8824
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.853980496125181e-5
allele num: 53938
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4264
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.268391679350583e-4
allele num: 7884
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.37e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

DP
type: SiteQuality
SIO_000300: 1.041685e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.237e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.103e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.285e0

GenotypeDepth
all individuals: 7171
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 239
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4756
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20967
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3009
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4425
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1082
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1014
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15474
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7936
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54350
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.720430107526882e-5
allele num: 14880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.659e0

QD
type: SiteQuality
SIO_000300: 1.063e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: 7.37e-1

DP
type: SiteQuality
SIO_000300: 1.058676e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.275e0

GenotypeDepth
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4626
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4273
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14956
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 578
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21421
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2956
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.700616456714018e-5
allele num: 14924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9044
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: -6.731e-1

QD
type: SiteQuality
SIO_000300: 9.77e0

DP
type: SiteQuality
SIO_000300: 1.071482e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.277e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

GenotypeDepth
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7354
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19318
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4609
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2072
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4241
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1970
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3168
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14204
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.82768578425997e-5
allele num: 54714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7172
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.805e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.317e0

DP
type: SiteQuality
SIO_000300: 1.081624e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.264e1

MQRankSum
type: SiteQuality
SIO_000300: 1.82e0

VQSLOD
type: SiteQuality
SIO_000300: -1.521e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

GenotypeDepth
all individuals: 7017
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11971
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7530
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2910
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4409
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3330
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14026
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4083
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1082
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1860
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.631477648255075e-5
allele num: 55074
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15030
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.09274e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.586e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.246e0

QD
type: SiteQuality
SIO_000300: 9.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.28e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 1.219e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

GenotypeDepth
all individuals: 7584
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6863
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11792
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1684
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4015
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1830
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3397
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 128
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2894
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13878
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4364
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9242
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.630420368651372e-5
allele num: 15082
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.6e-2

FS
type: SiteQuality
SIO_000300: 9.268000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.62e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.097537e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.423e0

QD
type: SiteQuality
SIO_000300: 1.359e1

GenotypeDepth
all individuals: 26
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 10
bin: 9.25e1
variant carriers: 4

GenotypeDepth
all individuals: 7
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 20
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 15
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3607
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22991
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1670
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3797
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4093
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2742
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 9.75e1
variant carriers: 29

GenotypeQuality
all individuals: 1297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.372495196266813e-4
allele num: 7286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.600230414746544e-5
allele num: 55552
num of homozygotes: 0

South Asian
type: Population
allele count: 26
allele frequency: 1.721854304635762e-3
allele num: 15100
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

FS
type: SiteQuality
SIO_000300: 1.216e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

QD
type: SiteQuality
SIO_000300: 1.241e1

MQ
type: SiteQuality
SIO_000300: 5.986e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

DP
type: SiteQuality
SIO_000300: 1.114866e6

GenotypeDepth
all individuals: 51
bin: 9.25e1
variant carriers: 45

GenotypeDepth
all individuals: 54
bin: 8.25e1
variant carriers: 47

GenotypeDepth
all individuals: 540
bin: 3.75e1
variant carriers: 259

GenotypeDepth
all individuals: 739
bin: 2.5e0
variant carriers: 10

GenotypeDepth
all individuals: 2488
bin: 3.25e1
variant carriers: 539

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 33

GenotypeDepth
all individuals: 67
bin: 7.25e1
variant carriers: 56

GenotypeDepth
all individuals: 50
bin: 6.75e1
variant carriers: 32

GenotypeQuality
all individuals: 493
bin: 1.75e1
variant carriers: 19

GenotypeQuality
all individuals: 1104
bin: 7.25e1
variant carriers: 40

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 43

GenotypeQuality
all individuals: 1141
bin: 5.25e1
variant carriers: 25

GenotypeQuality
all individuals: 3259
bin: 2.75e1
variant carriers: 12

GenotypeQuality
all individuals: 11538
bin: 2.25e1
variant carriers: 18

GenotypeQuality
all individuals: 208
bin: 8.75e1
variant carriers: 53

GenotypeQuality
all individuals: 3483
bin: 3.25e1
variant carriers: 22

GenotypeQuality
all individuals: 354
bin: 1.25e1
variant carriers: 8

GenotypeQuality
all individuals: 2279
bin: 3.75e1
variant carriers: 25

GenotypeQuality
all individuals: 916
bin: 7.5e0
variant carriers: 9

GenotypeQuality
all individuals: 423
bin: 2.5e0
variant carriers: 11

GenotypeQuality
all individuals: 21269
bin: 6.25e1
variant carriers: 39

GenotypeQuality
all individuals: 6125
bin: 9.75e1
variant carriers: 5862

GenotypeQuality
all individuals: 1361
bin: 4.75e1
variant carriers: 32

GenotypeQuality
all individuals: 1001
bin: 4.25e1
variant carriers: 18

GenotypeQuality
all individuals: 3440
bin: 6.75e1
variant carriers: 40

GenotypeQuality
all individuals: 561
bin: 5.75e1
variant carriers: 26

GenotypeQuality
all individuals: 483
bin: 8.25e1
variant carriers: 51

GenotypeQuality
all individuals: 1026
bin: 7.75e1
variant carriers: 46

South Asian
type: Population
allele count: 1047
allele frequency: 6.850300968332897e-2
allele num: 15284
num of homozygotes: 51

Latino
type: Population
allele count: 329
allele frequency: 3.459516298633018e-2
allele num: 9510
num of homozygotes: 5

Other
type: Population
allele count: 57
allele frequency: 7.744565217391304e-2
allele num: 736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 495
allele frequency: 1.056338028169014e-1
allele num: 4686
num of homozygotes: 14

East Asian
type: Population
allele count: 38
allele frequency: 5.191256830601093e-3
allele num: 7320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4216
allele frequency: 7.450342828868312e-2
allele num: 56588
num of homozygotes: 141

African
type: Population
allele count: 171
allele frequency: 2.077259475218659e-2
allele num: 8232
num of homozygotes: 2

VQSLOD
type: SiteQuality
SIO_000300: 6.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.482e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.20733e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

GenotypeDepth
all individuals: 36
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 582
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6365
bin: 1.75e1
variant carriers: 3

GenotypeDepth
all individuals: 170
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 269
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3635
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4212
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23864
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1310
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 3324
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1408
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11749
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.456743761625662e-4
allele num: 56986
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

FS
type: SiteQuality
SIO_000300: 1.228e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

DP
type: SiteQuality
SIO_000300: 1.183707e6

QD
type: SiteQuality
SIO_000300: 1.461e1

GenotypeDepth
all individuals: 9448
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2713
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 60
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 46
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1527
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11229
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2433
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 695
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4401
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24704
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7450
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 8.359207069500836e-4
allele num: 8374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57398
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

FS
type: SiteQuality
SIO_000300: 1.172e0

DP
type: SiteQuality
SIO_000300: 1.198991e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

QD
type: SiteQuality
SIO_000300: 1.325e1

GenotypeDepth
all individuals: 689
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9448
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10746
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25920
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1435
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2962
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4486
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2301
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 291
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.471378484396153e-5
allele num: 57614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15454
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.309e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

QD
type: SiteQuality
SIO_000300: 8.08e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 3.694e0

DP
type: SiteQuality
SIO_000300: 1.216168e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.018e0

GenotypeDepth
all individuals: 36
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5454
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9448
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 223
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2962
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1435
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1184
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25920
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10746
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2301
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4486
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.471378484396153e-5
allele num: 57614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.216168e6

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

FS
type: SiteQuality
SIO_000300: 3.694e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

VQSLOD
type: SiteQuality
SIO_000300: -5.309e-1

QD
type: SiteQuality
SIO_000300: 8.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.018e0

GenotypeDepth
all individuals: 24913
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8526
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1542
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 727
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10424
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4616
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3088
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2242
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2867
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.730343300110742e-5
allele num: 57792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4918
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.711e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.989e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.223735e6

GenotypeDepth
all individuals: 46
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4990
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 301
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1903
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5816
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7006
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1866
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 228
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32916
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10656
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.251877816725087e-4
allele num: 7988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60316
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.278e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

DP
type: SiteQuality
SIO_000300: 1.326113e6

GenotypeDepth
all individuals: 61
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 177
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29916
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 710
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6713
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32467
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5880
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1938
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.294058408862034e-5
allele num: 15888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10706
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.333388e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.805e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e0

FS
type: SiteQuality
SIO_000300: 1.861e0