3-73433072-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433072
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433072
    reference: chr 3
allele count: 1
allele frequency: 8.475294516484449e-6
allele num: 117990
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-116G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1616G>A
  hgvsp: ENSP00000418484.1:p.Ser539Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2645G>A
  hgvsp: ENSP00000263666.4:p.Ser882Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1796G>A
  hgvsp: ENSP00000418624.1:p.Ser599Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1616G>A
  hgvsp: ENSP00000418168.2:p.Ser539Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1811G>A
  hgvsp: ENSP00000442026.1:p.Ser604Asn
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10930
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27424
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser882Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

3-73433078-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433078
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433078
    reference: chr 3
allele count: 1
allele frequency: 8.502678343678259e-6
allele num: 117610
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1790A>G
  hgvsp: ENSP00000418624.1:p.Tyr597Cys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1610A>G
  hgvsp: ENSP00000418484.1:p.Tyr537Cys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1610A>G
  hgvsp: ENSP00000418168.2:p.Tyr537Cys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1805A>G
  hgvsp: ENSP00000442026.1:p.Tyr602Cys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2639A>G
  hgvsp: ENSP00000263666.4:p.Tyr880Cys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-122A>G
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5072
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2410
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2946
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 509
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genotype quality: GenotypeQuality
  all individuals: 26
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genotype quality: GenotypeQuality
  all individuals: 591
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genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr880Cys
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

3-73433081-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433081
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433081
    reference: chr 3
allele count: 2
allele frequency: 1.706193482340897e-5
allele num: 117220
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1787A>G
  hgvsp: ENSP00000418624.1:p.His596Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1607A>G
  hgvsp: ENSP00000418484.1:p.His536Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1802A>G
  hgvsp: ENSP00000442026.1:p.His601Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2636A>G
  hgvsp: ENSP00000263666.4:p.His879Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1607A>G
  hgvsp: ENSP00000418168.2:p.His536Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-125A>G
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10178
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His879Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-73433084-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433084
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433084
    reference: chr 3
allele count: 2
allele frequency: 1.707708596605075e-5
allele num: 117116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1604A>G
  hgvsp: ENSP00000418168.2:p.Gln535Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1799A>G
  hgvsp: ENSP00000442026.1:p.Gln600Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1604A>G
  hgvsp: ENSP00000418484.1:p.Gln535Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2633A>G
  hgvsp: ENSP00000263666.4:p.Gln878Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-128A>G
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1784A>G
  hgvsp: ENSP00000418624.1:p.Gln595Arg
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3087
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4368
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3224
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln878Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

3-73433085-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433085
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433085
    reference: chr 3
allele count: 1
allele frequency: 8.543211564091173e-6
allele num: 117052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-129C>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1603C>A
  hgvsp: ENSP00000418484.1:p.Gln535Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1798C>A
  hgvsp: ENSP00000442026.1:p.Gln600Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1783C>A
  hgvsp: ENSP00000418624.1:p.Gln595Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1603C>A
  hgvsp: ENSP00000418168.2:p.Gln535Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2632C>A
  hgvsp: ENSP00000263666.4:p.Gln878Lys
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10246
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2402
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27425
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln878Lys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-73433086-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433086
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433086
    reference: chr 3
allele count: 2
allele frequency: 1.710776179152481e-5
allele num: 116906
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2631C>T
  hgvsp: ENST00000263666.4:c.2631C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1602C>T
  hgvsp: ENST00000462146.2:c.1602C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-130C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1602C>T
  hgvsp: ENST00000466780.1:c.1602C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1782C>T
  hgvsp: ENST00000479530.1:c.1782C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1797C>T
  hgvsp: ENST00000535920.1:c.1797C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6608
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27427
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3205
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4366
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala877Ala
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ

3-73433086-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433086
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433086
    reference: chr 3
allele count: 1
allele frequency: 8.553880895762407e-6
allele num: 116906
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-130C>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1797C>A
  hgvsp: ENST00000535920.1:c.1797C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1602C>A
  hgvsp: ENST00000462146.2:c.1602C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2631C>A
  hgvsp: ENST00000263666.4:c.2631C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1602C>A
  hgvsp: ENST00000466780.1:c.1602C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1782C>A
  hgvsp: ENST00000479530.1:c.1782C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3086
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4366
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala877Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

3-73433088-C-CGTGCGCCGGGAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433088
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433100
    reference: chr 3
allele count: 3
allele frequency: 2.569725210717467e-5
allele num: 116744
alternate allele: CGTGCGCCGGGAT
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsp: ENSP00000418168.2:p.Ile530_His533dup
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsp: ENSP00000263666.4:p.Ile873_His876dup
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsp: ENSP00000418624.1:p.Ile590_His593dup
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsp: ENSP00000442026.1:p.Ile595_His598dup
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsp: ENSP00000418484.1:p.Ile530_His533dup
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2761
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3086
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile873_His876dup
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

3-73433092-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433092
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433092
    reference: chr 3
allele count: 1
allele frequency: 8.586344278060173e-6
allele num: 116464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1791G>C
  hgvsp: ENST00000535920.1:c.1791G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1776G>C
  hgvsp: ENST00000479530.1:c.1776G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-136G>C
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2625G>C
  hgvsp: ENST00000263666.4:c.2625G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1596G>C
  hgvsp: ENST00000466780.1:c.1596G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1596G>C
  hgvsp: ENST00000462146.2:c.1596G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10126
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2391
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3084
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3296
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala875Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

3-73433092-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433092
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433092
    reference: chr 3
allele count: 1
allele frequency: 8.586344278060173e-6
allele num: 116464
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2625G>A
  hgvsp: ENST00000263666.4:c.2625G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1791G>A
  hgvsp: ENST00000535920.1:c.1791G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1596G>A
  hgvsp: ENST00000466780.1:c.1596G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1596G>A
  hgvsp: ENST00000462146.2:c.1596G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1776G>A
  hgvsp: ENST00000479530.1:c.1776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-136G>A
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27424
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3296
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala875Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

3-73433093-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433093
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433093
    reference: chr 3
allele count: 2
allele frequency: 1.718921892189219e-5
allele num: 116352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1790C>T
  hgvsp: ENSP00000442026.1:p.Ala597Val
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1595C>T
  hgvsp: ENSP00000418484.1:p.Ala532Val
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1775C>T
  hgvsp: ENSP00000418624.1:p.Ala592Val
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-137C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1595C>T
  hgvsp: ENSP00000418168.2:p.Ala532Val
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2624C>T
  hgvsp: ENSP00000263666.4:p.Ala875Val
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3086
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala875Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-73433094-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433094
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433094
    reference: chr 3
allele count: 1
allele frequency: 8.595643727758772e-6
allele num: 116338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1594G>T
  hgvsp: ENSP00000418484.1:p.Ala532Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2623G>T
  hgvsp: ENSP00000263666.4:p.Ala875Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-138G>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1774G>T
  hgvsp: ENSP00000418624.1:p.Ala592Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1789G>T
  hgvsp: ENSP00000442026.1:p.Ala597Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1594G>T
  hgvsp: ENSP00000418168.2:p.Ala532Ser
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27423
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4351
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10046
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3289
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala875Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

3-73433096-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433096
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433096
    reference: chr 3
allele count: 1
allele frequency: 8.607926178425094e-6
allele num: 116172
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2621C>T
  hgvsp: ENSP00000263666.4:p.Pro874Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1787C>T
  hgvsp: ENSP00000442026.1:p.Pro596Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1592C>T
  hgvsp: ENSP00000418484.1:p.Pro531Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-140C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1592C>T
  hgvsp: ENSP00000418168.2:p.Pro531Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1772C>T
  hgvsp: ENSP00000418624.1:p.Pro591Leu
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3086
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10118
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro874Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

3-73433098-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433098
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433098
    reference: chr 3
allele count: 2
allele frequency: 1.723157513828339e-5
allele num: 116066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1785C>T
  hgvsp: ENST00000535920.1:c.1785C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2619C>T
  hgvsp: ENST00000263666.4:c.2619C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1590C>T
  hgvsp: ENST00000466780.1:c.1590C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1590C>T
  hgvsp: ENST00000462146.2:c.1590C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-142C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1770C>T
  hgvsp: ENST00000479530.1:c.1770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3089
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4351
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3350
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27423
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile873Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

3-73433098-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433098
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433098
    reference: chr 3
allele count: 1
allele frequency: 8.615787569141696e-6
allele num: 116066
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1590C>G
  hgvsp: ENSP00000418484.1:p.Ile530Met
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1590C>G
  hgvsp: ENSP00000418168.2:p.Ile530Met
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1785C>G
  hgvsp: ENSP00000442026.1:p.Ile595Met
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1770C>G
  hgvsp: ENSP00000418624.1:p.Ile590Met
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2619C>G
  hgvsp: ENSP00000263666.4:p.Ile873Met
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-142C>G
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27423
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3350
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4351
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile873Met
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

3-73433101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433101
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433101
    reference: chr 3
allele count: 1
allele frequency: 8.630361612151549e-6
allele num: 115870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1782C>T
  hgvsp: ENST00000535920.1:c.1782C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1767C>T
  hgvsp: ENST00000479530.1:c.1767C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1587C>T
  hgvsp: ENST00000462146.2:c.1587C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1587C>T
  hgvsp: ENST00000466780.1:c.1587C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-145C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2616C>T
  hgvsp: ENST00000263666.4:c.2616C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10048
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27423
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His872His
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

3-73433101-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433101
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433101
    reference: chr 3
allele count: 1
allele frequency: 8.630361612151549e-6
allele num: 115870
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1782C>G
  hgvsp: ENSP00000442026.1:p.His594Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1587C>G
  hgvsp: ENSP00000418168.2:p.His529Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2616C>G
  hgvsp: ENSP00000263666.4:p.His872Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1767C>G
  hgvsp: ENSP00000418624.1:p.His589Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1587C>G
  hgvsp: ENSP00000418484.1:p.His529Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-145C>G
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27423
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His872Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

3-73433103-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433103
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433103
    reference: chr 3
allele count: 2
allele frequency: 1.728907330567082e-5
allele num: 115680
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1585C>T
  hgvsp: ENSP00000418168.2:p.His529Tyr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1585C>T
  hgvsp: ENSP00000418484.1:p.His529Tyr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-147C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1765C>T
  hgvsp: ENSP00000418624.1:p.His589Tyr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2614C>T
  hgvsp: ENSP00000263666.4:p.His872Tyr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1780C>T
  hgvsp: ENSP00000442026.1:p.His594Tyr
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5947
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3088
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4342
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9988
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His872Tyr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

3-73433106-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433106
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433106
    reference: chr 3
allele count: 1
allele frequency: 8.664159836420662e-6
allele num: 115418
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2611G>A
  hgvsp: ENSP00000263666.4:p.Ala871Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-150G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1762G>A
  hgvsp: ENSP00000418624.1:p.Ala588Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1777G>A
  hgvsp: ENSP00000442026.1:p.Ala593Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1582G>A
  hgvsp: ENSP00000418168.2:p.Ala528Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1582G>A
  hgvsp: ENSP00000418484.1:p.Ala528Thr
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5947
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3319
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3085
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27421
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10010
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala871Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-73433107-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433107
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433107
    reference: chr 3
allele count: 1
allele frequency: 8.670770831526923e-6
allele num: 115330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1581C>A
  hgvsp: ENSP00000418168.2:p.His527Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1581C>A
  hgvsp: ENSP00000418484.1:p.His527Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2610C>A
  hgvsp: ENSP00000263666.4:p.His870Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1761C>A
  hgvsp: ENSP00000418624.1:p.His587Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1776C>A
  hgvsp: ENSP00000442026.1:p.His592Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-151C>A
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9968
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2378
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His870Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

3-73433112-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433112
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433112
    reference: chr 3
allele count: 12
allele frequency: 1.042191381077278e-4
allele num: 115142
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2605A>G
  hgvsp: ENSP00000263666.4:p.Lys869Glu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1576A>G
  hgvsp: ENSP00000418168.2:p.Lys526Glu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1771A>G
  hgvsp: ENSP00000442026.1:p.Lys591Glu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1756A>G
  hgvsp: ENSP00000418624.1:p.Lys586Glu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-156A>G
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1576A>G
  hgvsp: ENSP00000418484.1:p.Lys526Glu
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2761
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9964
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys869Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

3-73433115-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433115
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433115
    reference: chr 3
allele count: 1
allele frequency: 8.690362388111584e-6
allele num: 115070
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2602T>A
  hgvsp: ENSP00000263666.4:p.Tyr868Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1573T>A
  hgvsp: ENSP00000418168.2:p.Tyr525Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-159T>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1573T>A
  hgvsp: ENSP00000418484.1:p.Tyr525Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1753T>A
  hgvsp: ENSP00000418624.1:p.Tyr585Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1768T>A
  hgvsp: ENSP00000442026.1:p.Tyr590Asn
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9955
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2761
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Tyr868Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-73433117-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433117
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433117
    reference: chr 3
allele count: 20
allele frequency: 1.739644764539081e-4
allele num: 114966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1571C>T
  hgvsp: ENSP00000418484.1:p.Pro524Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2600C>T
  hgvsp: ENSP00000263666.4:p.Pro867Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1751C>T
  hgvsp: ENSP00000418624.1:p.Pro584Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1571C>T
  hgvsp: ENSP00000418168.2:p.Pro524Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-161C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1766C>T
  hgvsp: ENSP00000442026.1:p.Pro589Leu
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6599
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27431
  bin: 9.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2940
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3459
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro867Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

3-73433118-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433118
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433118
    reference: chr 3
allele count: 1
allele frequency: 8.698223822695406e-6
allele num: 114966
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2599C>T
  hgvsp: ENSP00000263666.4:p.Pro867Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1750C>T
  hgvsp: ENSP00000418624.1:p.Pro584Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-162C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1570C>T
  hgvsp: ENSP00000418168.2:p.Pro524Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1570C>T
  hgvsp: ENSP00000418484.1:p.Pro524Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1765C>T
  hgvsp: ENSP00000442026.1:p.Pro589Ser
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3501
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro867Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

3-73433121-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433121
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433121
    reference: chr 3
allele count: 1
allele frequency: 8.708677326087714e-6
allele num: 114828
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1762T>C
  hgvsp: ENSP00000442026.1:p.Ser588Pro
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1567T>C
  hgvsp: ENSP00000418168.2:p.Ser523Pro
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1567T>C
  hgvsp: ENSP00000418484.1:p.Ser523Pro
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2596T>C
  hgvsp: ENSP00000263666.4:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1747T>C
  hgvsp: ENSP00000418624.1:p.Ser583Pro
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-165T>C
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2383
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3471
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9849
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4311
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser866Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

3-73433122-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433122
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433122
    reference: chr 3
allele count: 4
allele frequency: 3.483288921399585e-5
allele num: 114834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1746C>T
  hgvsp: ENST00000479530.1:c.1746C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-166C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1761C>T
  hgvsp: ENST00000535920.1:c.1761C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1566C>T
  hgvsp: ENST00000466780.1:c.1566C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1566C>T
  hgvsp: ENST00000462146.2:c.1566C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2595C>T
  hgvsp: ENST00000263666.4:c.2595C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27417
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3487
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His865His
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

3-73433123-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433123
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433123
    reference: chr 3
allele count: 5
allele frequency: 4.357222532069158e-5
allele num: 114752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1565A>T
  hgvsp: ENSP00000418168.2:p.His522Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1760A>T
  hgvsp: ENSP00000442026.1:p.His587Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-167A>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1565A>T
  hgvsp: ENSP00000418484.1:p.His522Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1745A>T
  hgvsp: ENSP00000418624.1:p.His582Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2594A>T
  hgvsp: ENSP00000263666.4:p.His865Leu
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27419
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2380
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4312
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His865Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-73433123-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433123
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433123
    reference: chr 3
allele count: 19
allele frequency: 1.65574456218628e-4
allele num: 114752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1565A>C
  hgvsp: ENSP00000418484.1:p.His522Pro
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-167A>C
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1745A>C
  hgvsp: ENSP00000418624.1:p.His582Pro
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1760A>C
  hgvsp: ENSP00000442026.1:p.His587Pro
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1565A>C
  hgvsp: ENSP00000418168.2:p.His522Pro
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2594A>C
  hgvsp: ENSP00000263666.4:p.His865Pro
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27419
  bin: 9.75e1
  variant carriers: 19
hgvs: p.His865Pro
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP

3-73433127-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433127
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433127
    reference: chr 3
allele count: 1
allele frequency: 8.719460091031163e-6
allele num: 114686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1756C>T
  hgvsp: ENSP00000442026.1:p.His586Tyr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2590C>T
  hgvsp: ENSP00000263666.4:p.His864Tyr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1561C>T
  hgvsp: ENSP00000418168.2:p.His521Tyr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1561C>T
  hgvsp: ENSP00000418484.1:p.His521Tyr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-171C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1741C>T
  hgvsp: ENSP00000418624.1:p.His581Tyr
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4295
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3071
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27416
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His864Tyr
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD

3-73433129-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433129
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433129
    reference: chr 3
allele count: 1
allele frequency: 8.723567590201689e-6
allele num: 114632
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1559A>G
  hgvsp: ENSP00000418484.1:p.Tyr520Cys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2588A>G
  hgvsp: ENSP00000263666.4:p.Tyr863Cys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1754A>G
  hgvsp: ENSP00000442026.1:p.Tyr585Cys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1739A>G
  hgvsp: ENSP00000418624.1:p.Tyr580Cys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1559A>G
  hgvsp: ENSP00000418168.2:p.Tyr520Cys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-173A>G
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9752
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3071
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr863Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ

3-73433134-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433134
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433134
    reference: chr 3
allele count: 62
allele frequency: 5.417307423458688e-4
allele num: 114448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1554C>T
  hgvsp: ENST00000466780.1:c.1554C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2583C>T
  hgvsp: ENST00000263666.4:c.2583C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1749C>T
  hgvsp: ENST00000535920.1:c.1749C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1554C>T
  hgvsp: ENST00000462146.2:c.1554C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1734C>T
  hgvsp: ENST00000479530.1:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-178C>T
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7177
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9540
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27435
  bin: 9.75e1
  variant carriers: 62
hgvs: p.Pro861Pro
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

3-73433136-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433136
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433136
    reference: chr 3
allele count: 1
allele frequency: 8.751050126015123e-6
allele num: 114272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1732C>A
  hgvsp: ENSP00000418624.1:p.Pro578Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1552C>A
  hgvsp: ENSP00000418484.1:p.Pro518Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1747C>A
  hgvsp: ENSP00000442026.1:p.Pro583Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2581C>A
  hgvsp: ENSP00000263666.4:p.Pro861Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-180C>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1552C>A
  hgvsp: ENSP00000418168.2:p.Pro518Thr
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27405
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9295
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3065
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro861Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

3-73433137-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433137
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433137
    reference: chr 3
allele count: 9
allele frequency: 7.88187693762808e-5
allele num: 114186
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1551G>A
  hgvsp: ENST00000466780.1:c.1551G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1746G>A
  hgvsp: ENST00000535920.1:c.1746G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1551G>A
  hgvsp: ENST00000462146.2:c.1551G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-181G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1731G>A
  hgvsp: ENST00000479530.1:c.1731G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2580G>A
  hgvsp: ENST00000263666.4:c.2580G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9331
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2363
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4258
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu860Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

3-73433146-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433146
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433146
    reference: chr 3
allele count: 1
allele frequency: 8.781944322472995e-6
allele num: 113870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-190C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2571C>T
  hgvsp: ENST00000263666.4:c.2571C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1542C>T
  hgvsp: ENST00000466780.1:c.1542C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1542C>T
  hgvsp: ENST00000462146.2:c.1542C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1737C>T
  hgvsp: ENST00000535920.1:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1722C>T
  hgvsp: ENST00000479530.1:c.1722C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27404
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2355
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2938
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser857Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

3-73433146-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433146
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433146
    reference: chr 3
allele count: 2
allele frequency: 1.756388864494599e-5
allele num: 113870
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2571C>A
  hgvsp: ENSP00000263666.4:p.Ser857Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1722C>A
  hgvsp: ENSP00000418624.1:p.Ser574Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1542C>A
  hgvsp: ENSP00000418168.2:p.Ser514Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1737C>A
  hgvsp: ENSP00000442026.1:p.Ser579Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-190C>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1542C>A
  hgvsp: ENSP00000418484.1:p.Ser514Arg
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2938
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3057
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser857Arg
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

3-73433147-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433147
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433147
    reference: chr 3
allele count: 1
allele frequency: 8.780247954202227e-6
allele num: 113892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1541G>A
  hgvsp: ENSP00000418168.2:p.Ser514Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1721G>A
  hgvsp: ENSP00000418624.1:p.Ser574Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2570G>A
  hgvsp: ENSP00000263666.4:p.Ser857Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-191G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1541G>A
  hgvsp: ENSP00000418484.1:p.Ser514Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1736G>A
  hgvsp: ENSP00000442026.1:p.Ser579Asn
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3639
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2354
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser857Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

3-73433149-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433149
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433149
    reference: chr 3
allele count: 1
allele frequency: 8.783641346356545e-6
allele num: 113848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1539C>A
  hgvsp: ENST00000466780.1:c.1539C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2568C>A
  hgvsp: ENST00000263666.4:c.2568C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-193C>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1734C>A
  hgvsp: ENST00000535920.1:c.1734C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1719C>A
  hgvsp: ENST00000479530.1:c.1719C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1539C>A
  hgvsp: ENST00000462146.2:c.1539C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3716
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27402
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2938
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2354
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4215
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly856Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-73433159-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433159
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433159
    reference: chr 3
allele count: 3
allele frequency: 2.63866167080057e-5
allele num: 113694
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2558A>G
  hgvsp: ENSP00000263666.4:p.Gln853Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1724A>G
  hgvsp: ENSP00000442026.1:p.Gln575Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-203A>G
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1529A>G
  hgvsp: ENSP00000418168.2:p.Gln510Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1529A>G
  hgvsp: ENSP00000418484.1:p.Gln510Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1709A>G
  hgvsp: ENSP00000418624.1:p.Gln570Arg
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3030
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8633
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27402
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4167
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln853Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

3-73433163-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433163
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433163
    reference: chr 3
allele count: 2
allele frequency: 1.758241758241758e-5
allele num: 113750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-207A>G
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1525A>G
  hgvsp: ENSP00000418484.1:p.Ser509Gly
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1705A>G
  hgvsp: ENSP00000418624.1:p.Ser569Gly
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1525A>G
  hgvsp: ENSP00000418168.2:p.Ser509Gly
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2554A>G
  hgvsp: ENSP00000263666.4:p.Ser852Gly
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1720A>G
  hgvsp: ENSP00000442026.1:p.Ser574Gly
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2932
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3048
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8819
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3693
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser852Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

3-73433166-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433166
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433166
    reference: chr 3
allele count: 1
allele frequency: 8.795229467536807e-6
allele num: 113698
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1522C>T
  hgvsp: ENSP00000418484.1:p.Pro508Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1522C>T
  hgvsp: ENSP00000418168.2:p.Pro508Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2551C>T
  hgvsp: ENSP00000263666.4:p.Pro851Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-210C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1717C>T
  hgvsp: ENSP00000442026.1:p.Pro573Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1702C>T
  hgvsp: ENSP00000418624.1:p.Pro568Ser
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27401
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3050
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro851Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP

3-73433167-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433167
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433167
    reference: chr 3
allele count: 1
allele frequency: 8.814611099358297e-6
allele num: 113448
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1701G>A
  hgvsp: ENST00000479530.1:c.1701G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1521G>A
  hgvsp: ENST00000466780.1:c.1521G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1521G>A
  hgvsp: ENST00000462146.2:c.1521G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1716G>A
  hgvsp: ENST00000535920.1:c.1716G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2550G>A
  hgvsp: ENST00000263666.4:c.2550G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-211G>A
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3334
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2932
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4113
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr850Thr
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS

3-73433167-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433167
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433167
    reference: chr 3
allele count: 5
allele frequency: 4.407305549679148e-5
allele num: 113448
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1521G>C
  hgvsp: ENST00000466780.1:c.1521G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1521G>C
  hgvsp: ENST00000462146.2:c.1521G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1701G>C
  hgvsp: ENST00000479530.1:c.1701G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2550G>C
  hgvsp: ENST00000263666.4:c.2550G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1716G>C
  hgvsp: ENST00000535920.1:c.1716G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-211G>C
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4113
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2932
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3047
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3334
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr850Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

3-73433168-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433168
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433168
    reference: chr 3
allele count: 1
allele frequency: 8.79445597495339e-6
allele num: 113708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1700C>T
  hgvsp: ENSP00000418624.1:p.Thr567Met
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1520C>T
  hgvsp: ENSP00000418484.1:p.Thr507Met
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-212C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1520C>T
  hgvsp: ENSP00000418168.2:p.Thr507Met
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2549C>T
  hgvsp: ENSP00000263666.4:p.Thr850Met
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1715C>T
  hgvsp: ENSP00000442026.1:p.Thr572Met
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8578
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3596
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2933
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr850Met
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

3-73433168-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433168
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433168
    reference: chr 3
allele count: 7
allele frequency: 6.156119182467373e-5
allele num: 113708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1520C>A
  hgvsp: ENSP00000418484.1:p.Thr507Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1520C>A
  hgvsp: ENSP00000418168.2:p.Thr507Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1700C>A
  hgvsp: ENSP00000418624.1:p.Thr567Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-212C>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1715C>A
  hgvsp: ENSP00000442026.1:p.Thr572Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2549C>A
  hgvsp: ENSP00000263666.4:p.Thr850Lys
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4125
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3596
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2933
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr850Lys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-73433171-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433171
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433171
    reference: chr 3
allele count: 11
allele frequency: 9.670669737836935e-5
allele num: 113746
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2546C>T
  hgvsp: ENSP00000263666.4:p.Pro849Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1517C>T
  hgvsp: ENSP00000418168.2:p.Pro506Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1712C>T
  hgvsp: ENSP00000442026.1:p.Pro571Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-215C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1517C>T
  hgvsp: ENSP00000418484.1:p.Pro506Leu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1697C>T
  hgvsp: ENSP00000418624.1:p.Pro566Leu
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4122
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8697
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro849Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

3-73433173-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433173
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433173
    reference: chr 3
allele count: 2
allele frequency: 1.759169671914856e-5
allele num: 113690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1710C>T
  hgvsp: ENST00000535920.1:c.1710C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1515C>T
  hgvsp: ENST00000462146.2:c.1515C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1515C>T
  hgvsp: ENST00000466780.1:c.1515C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2544C>T
  hgvsp: ENST00000263666.4:c.2544C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-217C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1695C>T
  hgvsp: ENST00000479530.1:c.1695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3563
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2935
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27397
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8508
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser848Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

3-73433173-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433173
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433173
    reference: chr 3
allele count: 1
allele frequency: 8.795848359574281e-6
allele num: 113690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1695C>G
  hgvsp: ENSP00000418624.1:p.Ser565Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-217C>G
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2544C>G
  hgvsp: ENSP00000263666.4:p.Ser848Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1515C>G
  hgvsp: ENSP00000418484.1:p.Ser505Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1515C>G
  hgvsp: ENSP00000418168.2:p.Ser505Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1710C>G
  hgvsp: ENSP00000442026.1:p.Ser570Arg
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8508
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3563
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27397
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser848Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

3-73433173-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433173
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433173
    reference: chr 3
allele count: 1
allele frequency: 8.795848359574281e-6
allele num: 113690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1515C>A
  hgvsp: ENSP00000418484.1:p.Ser505Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2544C>A
  hgvsp: ENSP00000263666.4:p.Ser848Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1515C>A
  hgvsp: ENSP00000418168.2:p.Ser505Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1710C>A
  hgvsp: ENSP00000442026.1:p.Ser570Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1695C>A
  hgvsp: ENSP00000418624.1:p.Ser565Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-217C>A
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2935
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8508
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3563
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27397
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser848Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/3-73433174-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433174
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433174
    reference: chr 3
allele count: 2
allele frequency: 1.761121482159839e-5
allele num: 113564
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2543G>T
  hgvsp: ENSP00000263666.4:p.Ser848Ile
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1694G>T
  hgvsp: ENSP00000418624.1:p.Ser565Ile
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1514G>T
  hgvsp: ENSP00000418168.2:p.Ser505Ile
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1709G>T
  hgvsp: ENSP00000442026.1:p.Ser570Ile
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-218G>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1514G>T
  hgvsp: ENSP00000418484.1:p.Ser505Ile
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27396
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ser848Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

3-73433177-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433177
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433177
    reference: chr 3
allele count: 3
allele frequency: 2.640659108513485e-5
allele num: 113608
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2540G>A
  hgvsp: ENSP00000263666.4:p.Arg847Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1511G>A
  hgvsp: ENSP00000418484.1:p.Arg504Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1706G>A
  hgvsp: ENSP00000442026.1:p.Arg569Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-221G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1511G>A
  hgvsp: ENSP00000418168.2:p.Arg504Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1691G>A
  hgvsp: ENSP00000418624.1:p.Arg564Gln
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27397
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3478
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4086
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg847Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

3-73433178-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433178
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433178
    reference: chr 3
allele count: 4
allele frequency: 3.516607177395249e-5
allele num: 113746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1705C>T
  hgvsp: ENSP00000442026.1:p.Arg569Trp
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1510C>T
  hgvsp: ENSP00000418484.1:p.Arg504Trp
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-222C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1510C>T
  hgvsp: ENSP00000418168.2:p.Arg504Trp
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1690C>T
  hgvsp: ENSP00000418624.1:p.Arg564Trp
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2539C>T
  hgvsp: ENSP00000263666.4:p.Arg847Trp
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27396
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3644
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg847Trp
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

3-73433184-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433184
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433184
    reference: chr 3
allele count: 1
allele frequency: 8.779322938614974e-6
allele num: 113904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1504G>A
  hgvsp: ENSP00000418168.2:p.Gly502Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-228G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1699G>A
  hgvsp: ENSP00000442026.1:p.Gly567Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2533G>A
  hgvsp: ENSP00000263666.4:p.Gly845Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1504G>A
  hgvsp: ENSP00000418484.1:p.Gly502Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1684G>A
  hgvsp: ENSP00000418624.1:p.Gly562Arg
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3738
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3052
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8657
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly845Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

3-73433185-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433185
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433185
    reference: chr 3
allele count: 5
allele frequency: 4.383427138674101e-5
allele num: 114066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-229C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1698C>T
  hgvsp: ENST00000535920.1:c.1698C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1503C>T
  hgvsp: ENST00000466780.1:c.1503C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1503C>T
  hgvsp: ENST00000462146.2:c.1503C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1683C>T
  hgvsp: ENST00000479530.1:c.1683C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2532C>T
  hgvsp: ENST00000263666.4:c.2532C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6569
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2939
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3785
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp844Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

3-73433188-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433188
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433188
    reference: chr 3
allele count: 4
allele frequency: 3.503179135065072e-5
allele num: 114182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1500C>T
  hgvsp: ENST00000466780.1:c.1500C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1695C>T
  hgvsp: ENST00000535920.1:c.1695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2529C>T
  hgvsp: ENST00000263666.4:c.2529C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1500C>T
  hgvsp: ENST00000462146.2:c.1500C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1680C>T
  hgvsp: ENST00000479530.1:c.1680C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-232C>T
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3053
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27395
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8884
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4143
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser843Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

3-73433188-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433188
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433188
    reference: chr 3
allele count: 1
allele frequency: 8.757947837662679e-6
allele num: 114182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1500C>G
  hgvsp: ENSP00000418168.2:p.Ser500Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2529C>G
  hgvsp: ENSP00000263666.4:p.Ser843Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1500C>G
  hgvsp: ENSP00000418484.1:p.Ser500Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-232C>G
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1680C>G
  hgvsp: ENSP00000418624.1:p.Ser560Arg
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1695C>G
  hgvsp: ENSP00000442026.1:p.Ser565Arg
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7034
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3053
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27395
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8884
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser843Arg
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

3-73433191-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433191
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433191
    reference: chr 3
allele count: 1
allele frequency: 8.741105924721597e-6
allele num: 114402
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2526C>T
  hgvsp: ENST00000263666.4:c.2526C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1497C>T
  hgvsp: ENST00000462146.2:c.1497C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1677C>T
  hgvsp: ENST00000479530.1:c.1677C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-235C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1692C>T
  hgvsp: ENST00000535920.1:c.1692C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1497C>T
  hgvsp: ENST00000466780.1:c.1497C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3058
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3845
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala842Ala
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

3-73433193-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433193
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433193
    reference: chr 3
allele count: 1
allele frequency: 8.735608085678845e-6
allele num: 114474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1495G>A
  hgvsp: ENSP00000418168.2:p.Ala499Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1675G>A
  hgvsp: ENSP00000418624.1:p.Ala559Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2524G>A
  hgvsp: ENSP00000263666.4:p.Ala842Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-237G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1495G>A
  hgvsp: ENSP00000418484.1:p.Ala499Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1690G>A
  hgvsp: ENSP00000442026.1:p.Ala564Thr
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3770
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8999
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2358
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala842Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

3-73433195-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433195
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433195
    reference: chr 3
allele count: 2
allele frequency: 1.743648759393908e-5
allele num: 114702
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-239G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1493G>A
  hgvsp: ENSP00000418484.1:p.Arg498Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1688G>A
  hgvsp: ENSP00000442026.1:p.Arg563Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2522G>A
  hgvsp: ENSP00000263666.4:p.Arg841Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1493G>A
  hgvsp: ENSP00000418168.2:p.Arg498Lys
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1673G>A
  hgvsp: ENSP00000418624.1:p.Arg558Lys
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2057
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27394
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg841Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum

3-73433198-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433198
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433198
    reference: chr 3
allele count: 3
allele frequency: 2.613559144843448e-5
allele num: 114786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-242G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1685G>A
  hgvsp: ENSP00000442026.1:p.Arg562Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1670G>A
  hgvsp: ENSP00000418624.1:p.Arg557Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2519G>A
  hgvsp: ENSP00000263666.4:p.Arg840Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1490G>A
  hgvsp: ENSP00000418484.1:p.Arg497Gln
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1490G>A
  hgvsp: ENSP00000418168.2:p.Arg497Gln
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3693
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9293
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2363
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg840Gln
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

3-73433199-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433199
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433199
    reference: chr 3
allele count: 1
allele frequency: 8.702008423544154e-6
allele num: 114916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-243C>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1489C>A
  hgvsp: ENST00000462146.2:c.1489C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1489C>A
  hgvsp: ENST00000466780.1:c.1489C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1684C>A
  hgvsp: ENST00000535920.1:c.1684C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1669C>A
  hgvsp: ENST00000479530.1:c.1669C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2518C>A
  hgvsp: ENST00000263666.4:c.2518C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3072
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2057
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2955
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg840Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS

3-73433201-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433201
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433201
    reference: chr 3
allele count: 1
allele frequency: 8.682967490969713e-6
allele num: 115168
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1487A>G
  hgvsp: ENSP00000418168.2:p.Glu496Gly
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1487A>G
  hgvsp: ENSP00000418484.1:p.Glu496Gly
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-245A>G
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1682A>G
  hgvsp: ENSP00000442026.1:p.Glu561Gly
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1667A>G
  hgvsp: ENSP00000418624.1:p.Glu556Gly
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2516A>G
  hgvsp: ENSP00000263666.4:p.Glu839Gly
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9603
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3078
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu839Gly
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

3-73433203-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433203
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433203
    reference: chr 3
allele count: 1
allele frequency: 8.668966832532898e-6
allele num: 115354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1665A>C
  hgvsp: ENSP00000418624.1:p.Lys555Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1680A>C
  hgvsp: ENSP00000442026.1:p.Lys560Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-247A>C
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2514A>C
  hgvsp: ENSP00000263666.4:p.Lys838Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1485A>C
  hgvsp: ENSP00000418168.2:p.Lys495Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1485A>C
  hgvsp: ENSP00000418484.1:p.Lys495Asn
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4252
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2380
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9792
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys838Asn
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

3-73433205-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433205
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433205
    reference: chr 3
allele count: 1
allele frequency: 8.660558086363084e-6
allele num: 115466
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-249A>G
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1663A>G
  hgvsp: ENSP00000418624.1:p.Lys555Glu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2512A>G
  hgvsp: ENSP00000263666.4:p.Lys838Glu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1678A>G
  hgvsp: ENSP00000442026.1:p.Lys560Glu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1483A>G
  hgvsp: ENSP00000418484.1:p.Lys495Glu
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1483A>G
  hgvsp: ENSP00000418168.2:p.Lys495Glu
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3443
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2060
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2959
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys838Glu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

3-73433207-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433207
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433207
    reference: chr 3
allele count: 1
allele frequency: 8.658008658008657e-6
allele num: 115500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1481G>A
  hgvsp: ENSP00000418484.1:p.Ser494Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1661G>A
  hgvsp: ENSP00000418624.1:p.Ser554Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2510G>A
  hgvsp: ENSP00000263666.4:p.Ser837Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-251G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1481G>A
  hgvsp: ENSP00000418168.2:p.Ser494Asn
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1676G>A
  hgvsp: ENSP00000442026.1:p.Ser559Asn
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9990
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2959
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4253
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser837Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

3-73433218-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433218
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433218
    reference: chr 3
allele count: 1
allele frequency: 8.589589417625837e-6
allele num: 116420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1650G>A
  hgvsp: ENST00000479530.1:c.1650G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2499G>A
  hgvsp: ENST00000263666.4:c.2499G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1470G>A
  hgvsp: ENST00000466780.1:c.1470G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1665G>A
  hgvsp: ENST00000535920.1:c.1665G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-262G>A
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1470G>A
  hgvsp: ENST00000462146.2:c.1470G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27392
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2962
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10385
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln833Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

3-73433222-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433222
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433222
    reference: chr 3
allele count: 1
allele frequency: 8.553441905022582e-6
allele num: 116912
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1646A>G
  hgvsp: ENSP00000418624.1:p.Asn549Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1466A>G
  hgvsp: ENSP00000418484.1:p.Asn489Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1466A>G
  hgvsp: ENSP00000418168.2:p.Asn489Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2495A>G
  hgvsp: ENSP00000263666.4:p.Asn832Ser
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-266A>G
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1661A>G
  hgvsp: ENSP00000442026.1:p.Asn554Ser
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27386
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2062
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3109
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn832Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-73433223-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433223
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433223
    reference: chr 3
allele count: 1
allele frequency: 8.539563799081142e-6
allele num: 117102
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1465A>G
  hgvsp: ENSP00000418168.2:p.Asn489Asp
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1660A>G
  hgvsp: ENSP00000442026.1:p.Asn554Asp
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1645A>G
  hgvsp: ENSP00000418624.1:p.Asn549Asp
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2494A>G
  hgvsp: ENSP00000263666.4:p.Asn832Asp
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1465A>G
  hgvsp: ENSP00000418484.1:p.Asn489Asp
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-267A>G
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2973
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3135
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn832Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

3-73433226-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433226
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433226
    reference: chr 3
allele count: 1
allele frequency: 8.516146613980106e-6
allele num: 117424
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2491C>G
  hgvsp: ENSP00000263666.4:p.Pro831Ala
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-270C>G
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1657C>G
  hgvsp: ENSP00000442026.1:p.Pro553Ala
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1462C>G
  hgvsp: ENSP00000418168.2:p.Pro488Ala
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1642C>G
  hgvsp: ENSP00000418624.1:p.Pro548Ala
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1462C>G
  hgvsp: ENSP00000418484.1:p.Pro488Ala
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27394
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2765
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro831Ala
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

3-73433226-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433226
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433226
    reference: chr 3
allele count: 1
allele frequency: 8.516146613980106e-6
allele num: 117424
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1642C>A
  hgvsp: ENSP00000418624.1:p.Pro548Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1462C>A
  hgvsp: ENSP00000418168.2:p.Pro488Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1657C>A
  hgvsp: ENSP00000442026.1:p.Pro553Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1462C>A
  hgvsp: ENSP00000418484.1:p.Pro488Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2491C>A
  hgvsp: ENSP00000263666.4:p.Pro831Thr
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-270C>A
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27394
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4488
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2765
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2978
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro831Thr
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

3-73433227-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433227
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433227
    reference: chr 3
allele count: 1
allele frequency: 8.510783162266591e-6
allele num: 117498
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2490C>T
  hgvsp: ENST00000263666.4:c.2490C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1461C>T
  hgvsp: ENST00000462146.2:c.1461C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-271C>T
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1461C>T
  hgvsp: ENST00000466780.1:c.1461C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1641C>T
  hgvsp: ENST00000479530.1:c.1641C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1656C>T
  hgvsp: ENST00000535920.1:c.1656C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2979
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2276
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp830Asp
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-73433234-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433234
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433234
    reference: chr 3
allele count: 1
allele frequency: 8.442808415791428e-6
allele num: 118444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1454A>C
  hgvsp: ENSP00000418168.2:p.Glu485Ala
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1454A>C
  hgvsp: ENSP00000418484.1:p.Glu485Ala
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1649A>C
  hgvsp: ENSP00000442026.1:p.Glu550Ala
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-278A>C
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2483A>C
  hgvsp: ENSP00000263666.4:p.Glu828Ala
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1634A>C
  hgvsp: ENSP00000418624.1:p.Glu545Ala
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27393
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1734
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3012
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu828Ala
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

3-73433234-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433234
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433234
    reference: chr 3
allele count: 1
allele frequency: 8.442808415791428e-6
allele num: 118444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1634A>T
  hgvsp: ENSP00000418624.1:p.Glu545Val
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2483A>T
  hgvsp: ENSP00000263666.4:p.Glu828Val
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1454A>T
  hgvsp: ENSP00000418168.2:p.Glu485Val
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1454A>T
  hgvsp: ENSP00000418484.1:p.Glu485Val
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1649A>T
  hgvsp: ENSP00000442026.1:p.Glu550Val
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-278A>T
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4632
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu828Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum

3-73433241-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73433241
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 73433241
    reference: chr 3
allele count: 4
allele frequency: 3.353004291845494e-5
allele num: 119296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418624
  ensembl transcript: ENST00000479530
  gene symbol: PDZRN3
  hgvsc: ENST00000479530.1:c.1627C>T
  hgvsp: ENST00000479530.1:c.1627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418484
  ensembl transcript: ENST00000466780
  gene symbol: PDZRN3
  hgvsc: ENST00000466780.1:c.1447C>T
  hgvsp: ENST00000466780.1:c.1447C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000418168
  ensembl transcript: ENST00000462146
  gene symbol: PDZRN3
  hgvsc: ENST00000462146.2:c.1447C>T
  hgvsp: ENST00000462146.2:c.1447C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000263666
  ensembl transcript: ENST00000263666
  gene symbol: PDZRN3
  hgvsc: ENST00000263666.4:c.2476C>T
  hgvsp: ENST00000263666.4:c.2476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000442026
  ensembl transcript: ENST00000535920
  gene symbol: PDZRN3
  hgvsc: ENST00000535920.1:c.1642C>T
  hgvsp: ENST00000535920.1:c.1642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121440
  ensembl protein: ENSP00000419095
  ensembl transcript: ENST00000494559
  gene symbol: PDZRN3
  hgvsc: ENST00000494559.1:c.708-285C>T
  variant of: http://identifiers.org/hgnc/17704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6768
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7276
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu826Leu
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 2055
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3094
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2946
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2413
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4427
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522672594938636e-5
allele num: 65674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

QD
type: SiteQuality
SIO_000300: 1.139e1

FS
type: SiteQuality
SIO_000300: 6.291e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.876e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.51e-1

DP
type: SiteQuality
SIO_000300: 2.481439e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.359e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.39e-1

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10614
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4405
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27426
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2054
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.128599942971201e-5
allele num: 14028
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.617e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e0

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 3.444e0

QD
type: SiteQuality
SIO_000300: 1.194e1

DP
type: SiteQuality
SIO_000300: 2.475884e6

VQSLOD
type: SiteQuality
SIO_000300: 3.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.03e0

GenotypeQuality
all individuals: 3118
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2946
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27425
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2054
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.274843590862796e-5
allele num: 13746
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.471393e6

VQSLOD
type: SiteQuality
SIO_000300: -5.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.238e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.618e0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2945
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27425
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2055
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10269
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527697149317119e-5
allele num: 65458
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.317430118542368e-5
allele num: 13666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

DP
type: SiteQuality
SIO_000300: 2.470409e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.25e-1

FS
type: SiteQuality
SIO_000300: 4.397e0

MQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

GenotypeQuality
all individuals: 256
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3230
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4372
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3085
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528210770829513e-5
allele num: 65436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e0

DP
type: SiteQuality
SIO_000300: 2.470084e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.81e-1

FS
type: SiteQuality
SIO_000300: 1.814e0

QD
type: SiteQuality
SIO_000300: 1.364e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.41e-1

GenotypeQuality
all individuals: 107
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3086
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2398
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2945
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10080
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31535077564251e-4
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65402
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.027e0

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

DP
type: SiteQuality
SIO_000300: 2.468661e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

FS
type: SiteQuality
SIO_000300: 2.474e0

QD
type: SiteQuality
SIO_000300: 1.239e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10080
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27427
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3205
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2398
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529005229197884e-5
allele num: 65402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e-1

FS
type: SiteQuality
SIO_000300: 2.474e0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.027e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 2.468661e6

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

QD
type: SiteQuality
SIO_000300: 1.239e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2946
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4359
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27425
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 10145
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.590103736344442e-5
allele num: 65358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.593e-1

MQ
type: SiteQuality
SIO_000300: 5.379e1

DP
type: SiteQuality
SIO_000300: 2.468415e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 9.79e-1

QD
type: SiteQuality
SIO_000300: 3.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.074e0

MQRankSum
type: SiteQuality
SIO_000300: -5.161e0

GenotypeQuality
all individuals: 199
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27424
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531862745098039e-5
allele num: 65280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

MQRankSum
type: SiteQuality
SIO_000300: 7.13e-1

DP
type: SiteQuality
SIO_000300: 2.466731e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65280
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.328e1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 2.466731e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

FS
type: SiteQuality
SIO_000300: 4.67e-1

MQRankSum
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SIO_000300: 7.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.064852274120387e-5
allele num: 65256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13120
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: -4.179e0

DP
type: SiteQuality
SIO_000300: 2.465011e6

FS
type: SiteQuality
SIO_000300: 2.5507e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.159999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

QD
type: SiteQuality
SIO_000300: 1.193e1

MQ
type: SiteQuality
SIO_000300: 5.984e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2391
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532426137060194e-5
allele num: 65256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13106
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.298e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.472e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.912e1

MQRankSum
type: SiteQuality
SIO_000300: -1.161e0

VQSLOD
type: SiteQuality
SIO_000300: -4.783e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 1.468e0

DP
type: SiteQuality
SIO_000300: 2.464826e6

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13002
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533695285420693e-5
allele num: 65202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e-1

DP
type: SiteQuality
SIO_000300: 2.464541e6

FS
type: SiteQuality
SIO_000300: 2.521e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e0

MQRankSum
type: SiteQuality
SIO_000300: -7.32e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

MQ
type: SiteQuality
SIO_000300: 5.91e1

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2387
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.068049334233295e-5
allele num: 65188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12922
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.463255e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQ
type: SiteQuality
SIO_000300: 5.947e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.892e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.68e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

MQRankSum
type: SiteQuality
SIO_000300: -4.08e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10077
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variant carriers: 0

GenotypeQuality
all individuals: 2054
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.682416731216112e-5
allele num: 10328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.331e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.68e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.892e0

DP
type: SiteQuality
SIO_000300: 2.463255e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.05e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.382e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

DP
type: SiteQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12786
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.382e0

FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.704968944099378e-5
allele num: 10304
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.536287101333497e-5
allele num: 65092
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-3

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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FS
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MQ
type: SiteQuality
SIO_000300: 5.908e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2380
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2947
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537562655678219e-5
allele num: 65038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.909999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

VQSLOD
type: SiteQuality
SIO_000300: 3.45e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

DP
type: SiteQuality
SIO_000300: 2.459977e6

QD
type: SiteQuality
SIO_000300: 1.087e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.68e-1

GenotypeQuality
all individuals: 173
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 2.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 4335
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2761
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537751806858373e-5
allele num: 65030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12410
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.07e0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.458972e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.901e1

VQSLOD
type: SiteQuality
SIO_000300: -1.516e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.109e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 12

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 3078
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.077188230949157e-4
allele num: 64984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12278
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.187648456057007e-3
allele num: 842
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.725734292939116e-5
allele num: 10282
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.605071205279611e-4
allele num: 11516
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

DP
type: SiteQuality
SIO_000300: 2.457886e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.277e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 3080
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 27419
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variant carriers: 1

GenotypeQuality
all individuals: 2941
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.72951936174353e-5
allele num: 10278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.53e-1

DP
type: SiteQuality
SIO_000300: 2.456603e6

FS
type: SiteQuality
SIO_000300: 3.066e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.085e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.73e-1

GenotypeQuality
all individuals: 2377
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 550
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 8.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64940
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.642845408247084e-3
allele num: 12174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.283e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.344e0

DP
type: SiteQuality
SIO_000300: 2.456338e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 3.19e0

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

GenotypeQuality
all individuals: 439
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3077
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GenotypeQuality
all individuals: 27417
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64936
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.220979940808945e-5
allele num: 12164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.92e-1

QD
type: SiteQuality
SIO_000300: 1.44e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.16e-1

DP
type: SiteQuality
SIO_000300: 2.455645e6

MQRankSum
type: SiteQuality
SIO_000300: 5.82e-1

FS
type: SiteQuality
SIO_000300: 8.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.942e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.52e-1

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 556
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 147
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variant carriers: 0

GenotypeQuality
all individuals: 3075
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540927021696253e-5
allele num: 64896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.602e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.21e0

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.57e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.57e-1

FS
type: SiteQuality
SIO_000300: 7.621e0

DP
type: SiteQuality
SIO_000300: 2.454317e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.25e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2945
bin: 8.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.622211265869592e-5
allele num: 64904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.199040767386091e-3
allele num: 834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.19e0

DP
type: SiteQuality
SIO_000300: 2.453911e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

QD
type: SiteQuality
SIO_000300: 1.139e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 3074
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.706060045619876e-5
allele num: 64884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.23e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 5.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.409e1

DP
type: SiteQuality
SIO_000300: 2.454716e6

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 2760
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 1.65045170257123e-3
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12040
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

QD
type: SiteQuality
SIO_000300: 1.409e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 5.24e-1

DP
type: SiteQuality
SIO_000300: 2.454716e6

GenotypeQuality
all individuals: 255
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
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variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3527
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5416872224963e-5
allele num: 64864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11990
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.139999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.51e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.919e0

DP
type: SiteQuality
SIO_000300: 2.452324e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.152e1

GenotypeQuality
all individuals: 27416
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3519
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2938
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541829843658454e-5
allele num: 64858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11952
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.55e0

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

FS
type: SiteQuality
SIO_000300: 2.0489e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

QD
type: SiteQuality
SIO_000300: 1.576e1

DP
type: SiteQuality
SIO_000300: 2.451628e6

VQSLOD
type: SiteQuality
SIO_000300: -2.736e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeQuality
all individuals: 3063
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 597
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GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 61
allele frequency: 9.411546888018021e-4
allele num: 64814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.87e-1

QD
type: SiteQuality
SIO_000300: 1.357e1

VQSLOD
type: SiteQuality
SIO_000300: 5.91e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.88e0

DP
type: SiteQuality
SIO_000300: 2.451917e6

GenotypeQuality
all individuals: 291
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2938
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544163063619518e-5
allele num: 64760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

QD
type: SiteQuality
SIO_000300: 1.162e1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-3

FS
type: SiteQuality
SIO_000300: 6.71e-1

DP
type: SiteQuality
SIO_000300: 2.446106e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.793e0

GenotypeQuality
all individuals: 86
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27409
bin: 9.75e1
variant carriers: 8

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 60
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3064
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variant carriers: 1

GenotypeQuality
all individuals: 592
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 8
allele frequency: 6.815471119441132e-4
allele num: 11738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545069682642687e-5
allele num: 64722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.76e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.126e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.655e0

DP
type: SiteQuality
SIO_000300: 2.446342e6

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
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GenotypeQuality
all individuals: 8951
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variant carriers: 0

GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 4212
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3057
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variant carriers: 0

GenotypeQuality
all individuals: 122
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GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.577800651912849e-5
allele num: 11658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.517e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-3

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 2.441657e6

VQSLOD
type: SiteQuality
SIO_000300: 8.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

QD
type: SiteQuality
SIO_000300: 1.163e1

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8951
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 27404
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.738525730180807e-4
allele num: 11504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.441657e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQ
type: SiteQuality
SIO_000300: 5.969e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

FS
type: SiteQuality
SIO_000300: 2.517e0

VQSLOD
type: SiteQuality
SIO_000300: 8.25e-1

QD
type: SiteQuality
SIO_000300: 1.163e1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548275221403357e-5
allele num: 64588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.282e0

FS
type: SiteQuality
SIO_000300: 1.208e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

DP
type: SiteQuality
SIO_000300: 2.441266e6

QD
type: SiteQuality
SIO_000300: 1.226e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2051
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.549234678069034e-5
allele num: 64548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.57e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.882e1

QD
type: SiteQuality
SIO_000300: 4.5e0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.021e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3469
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64472
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.204819277108434e-3
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.940357852882704e-5
allele num: 10060
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.582217645039479e-5
allele num: 11652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 2.436647e6

FS
type: SiteQuality
SIO_000300: 5.679999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.265e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.524e0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 638
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2339
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11684
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.988862370723946e-4
allele num: 10056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-1

QD
type: SiteQuality
SIO_000300: 1.223e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

DP
type: SiteQuality
SIO_000300: 2.436593e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.582e0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

GenotypeQuality
all individuals: 4162
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
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GenotypeQuality
all individuals: 2756
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.566044200788077e-5
allele num: 11674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.208e0

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-1

QD
type: SiteQuality
SIO_000300: 1.378e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.97e-1

FS
type: SiteQuality
SIO_000300: 4.183e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: -6.15e-1

DP
type: SiteQuality
SIO_000300: 2.435477e6

GenotypeQuality
all individuals: 8368
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552312946289972e-5
allele num: 64420
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.434939e6

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.98e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.83e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

FS
type: SiteQuality
SIO_000300: 1.097e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.709284096847239e-5
allele num: 11482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.209251785159888e-5
allele num: 64420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

FS
type: SiteQuality
SIO_000300: 1.097e0

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

QD
type: SiteQuality
SIO_000300: 1.331e1

DP
type: SiteQuality
SIO_000300: 2.434939e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.98e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27401
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550916591705698e-5
allele num: 64478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.45e-1

FS
type: SiteQuality
SIO_000300: 3.77e0

VQSLOD
type: SiteQuality
SIO_000300: 6.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-1

QD
type: SiteQuality
SIO_000300: 1.426e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

DP
type: SiteQuality
SIO_000300: 2.435131e6

GenotypeQuality
all individuals: 170
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8578
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GenotypeQuality
all individuals: 2756
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64478
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 5.973715651135006e-4
allele num: 11718
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.435131e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

QD
type: SiteQuality
SIO_000300: 1.426e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.45e-1

GenotypeQuality
all individuals: 2336
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
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variant carriers: 0

GenotypeQuality
all individuals: 27399
bin: 9.75e1
variant carriers: 10

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3050
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.978048293753742e-5
allele num: 10022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11746
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.707767328456984e-4
allele num: 11484
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

DP
type: SiteQuality
SIO_000300: 2.435747e6

MQRankSum
type: SiteQuality
SIO_000300: 3.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.79e-1

FS
type: SiteQuality
SIO_000300: 1.102e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.432e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 1.333e1

GenotypeQuality
all individuals: 2335
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.102603083987466e-5
allele num: 64462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

QD
type: SiteQuality
SIO_000300: 1.57e1

FS
type: SiteQuality
SIO_000300: 9.433e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.012e0

DP
type: SiteQuality
SIO_000300: 2.43468e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.509189925119128e-5
allele num: 11752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64462
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.07e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 2.43468e6

FS
type: SiteQuality
SIO_000300: 9.433e0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

QD
type: SiteQuality
SIO_000300: 1.57e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 3049
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551301541993733e-5
allele num: 64462
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 2.43468e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.433e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

QD
type: SiteQuality
SIO_000300: 1.57e1

GenotypeQuality
all individuals: 711
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 4114
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GenotypeQuality
all individuals: 2935
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GenotypeQuality
all individuals: 212
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3048
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9956
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.103373366849766e-5
allele num: 64446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

QD
type: SiteQuality
SIO_000300: 1.846e1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

FS
type: SiteQuality
SIO_000300: 1.8198e1

VQSLOD
type: SiteQuality
SIO_000300: -1.373e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.216e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 2.434249e6

GenotypeQuality
all individuals: 168
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2755
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.653904625981198e-5
allele num: 64462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9920
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 3.315e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.4e-1

DP
type: SiteQuality
SIO_000300: 2.434999e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.99e-1

QD
type: SiteQuality
SIO_000300: 1.585e1

MQ
type: SiteQuality
SIO_000300: 5.932e1

MQRankSum
type: SiteQuality
SIO_000300: -4.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.55e-1

GenotypeQuality
all individuals: 2756
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 709
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variant carriers: 0

GenotypeQuality
all individuals: 4101
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11846
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.007455168245013e-4
allele num: 9926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.651451252790871e-5
allele num: 64496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.87e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.435329e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

QD
type: SiteQuality
SIO_000300: 1.489e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2757
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.007658202337767e-4
allele num: 9924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.91e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

FS
type: SiteQuality
SIO_000300: 2.248e0

VQSLOD
type: SiteQuality
SIO_000300: 1.94e-1

DP
type: SiteQuality
SIO_000300: 2.437274e6

QD
type: SiteQuality
SIO_000300: 1.209e1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 4110
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.03220611916264e-4
allele num: 9936
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12048
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.177e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.437678e6

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

FS
type: SiteQuality
SIO_000300: 1.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

GenotypeQuality
all individuals: 3886
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2349
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GenotypeQuality
all individuals: 147
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.664179104477612e-4
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12128
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9924
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

QD
type: SiteQuality
SIO_000300: 1.432e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.06e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 2.439923e6

VQSLOD
type: SiteQuality
SIO_000300: 8.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

FS
type: SiteQuality
SIO_000300: 1.752e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.81e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 80
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2942
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GenotypeQuality
all individuals: 4143
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 1.432e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.29e-1

DP
type: SiteQuality
SIO_000300: 2.439923e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.81e-1

FS
type: SiteQuality
SIO_000300: 1.752e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64684
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 8.132726089785297e-5
allele num: 12296
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.441956e6

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 6.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.652e0

MQRankSum
type: SiteQuality
SIO_000300: 8.84e-1

QD
type: SiteQuality
SIO_000300: 4.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64712
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165501165501166e-4
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 5.304e0

DP
type: SiteQuality
SIO_000300: 2.443397e6

MQ
type: SiteQuality
SIO_000300: 5.912e1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543686322939179e-5
allele num: 64780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.014104824491104e-5
allele num: 12478
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
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allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.17e-1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: 7.75e-1

DP
type: SiteQuality
SIO_000300: 2.44507e6

QD
type: SiteQuality
SIO_000300: 1.235e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.064e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4192
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GenotypeQuality
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GenotypeQuality
all individuals: 403
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27393
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 1
allele frequency: 1.009489198465576e-4
allele num: 9906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.594387755102041e-4
allele num: 12544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.187e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.654e0

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e0

FS
type: SiteQuality
SIO_000300: 2.219e0

DP
type: SiteQuality
SIO_000300: 2.447434e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.06e-1

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4213
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GenotypeQuality
all individuals: 2364
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542638528939899e-5
allele num: 64824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12662
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.572e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

QD
type: SiteQuality
SIO_000300: 1.112e1

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

DP
type: SiteQuality
SIO_000300: 2.448744e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 1.2306e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 117
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GenotypeQuality
all individuals: 2960
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540832049306625e-5
allele num: 64900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.051e0

QD
type: SiteQuality
SIO_000300: 1.152e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 5.081e0

MQRankSum
type: SiteQuality
SIO_000300: -3.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.070000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 2.451431e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.94e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3082
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GenotypeQuality
all individuals: 648
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.733952049497293e-5
allele num: 12930
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64948
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.93e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.112e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.507e0

DP
type: SiteQuality
SIO_000300: 2.453709e6

MQ
type: SiteQuality
SIO_000300: 5.912e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.69704433497537e-5
allele num: 12992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.024e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: -1.036e0

QD
type: SiteQuality
SIO_000300: 3.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.41e-1

DP
type: SiteQuality
SIO_000300: 2.455165e6

GenotypeQuality
all individuals: 368
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3316
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
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variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2059
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27391
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3081
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2378
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538840329927367e-5
allele num: 64984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.31e0

QD
type: SiteQuality
SIO_000300: 1.273e1

DP
type: SiteQuality
SIO_000300: 2.457445e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.493e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3104
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532191340054546e-5
allele num: 65266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9940
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.94e-1

DP
type: SiteQuality
SIO_000300: 2.468425e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.21e0

FS
type: SiteQuality
SIO_000300: 5.61e0

QD
type: SiteQuality
SIO_000300: 1.087e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.75e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 3.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.151029748283753e-5
allele num: 13984
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.474954e6

MQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.096e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.580000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65426
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.002807862013638e-4
allele num: 9972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.386e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.605e0

DP
type: SiteQuality
SIO_000300: 2.476344e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 134
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GenotypeQuality
all individuals: 2062
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526111772426212e-5
allele num: 65526
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.63e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.19e-1

DP
type: SiteQuality
SIO_000300: 2.479909e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 118
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2421
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variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14270
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: 1.05e-1

DP
type: SiteQuality
SIO_000300: 2.479909e6

MQRankSum
type: SiteQuality
SIO_000300: -6.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.19e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.046e1

GenotypeQuality
all individuals: 296
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11388
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4487
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2766
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27394
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3155
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65542
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.481048e6

VQSLOD
type: SiteQuality
SIO_000300: -1.405e0

FS
type: SiteQuality
SIO_000300: 8.734999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.764e0

QD
type: SiteQuality
SIO_000300: 8.130000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 8.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.694e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3182
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4632
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2075
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14930
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 5.61e0

MQRankSum
type: SiteQuality
SIO_000300: -6.45e-1

QD
type: SiteQuality
SIO_000300: 1.023e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.49305e6

GenotypeQuality
all individuals: 364
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27393
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3012
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2770
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519618271890101e-5
allele num: 65806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14930
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.45e-1

QD
type: SiteQuality
SIO_000300: 1.023e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 5.61e0

DP
type: SiteQuality
SIO_000300: 2.49305e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.71e-1