3-179047368-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047368
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047368
    reference: chr 3
allele count: 1
allele frequency: 8.288162845823595e-6
allele num: 120654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.59-38G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.59-38G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.59-38G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.59-38G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.59-38G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.59-38G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.59-38G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.235-38G>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4307
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

3-179047370-TTACTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047370
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047365
    reference: chr 3
allele count: 9
allele frequency: 7.457245127933183e-5
allele num: 120688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.235-31_235-27delGTACT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.59-31_59-27delGTACT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.59-31_59-27delGTACT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.59-31_59-27delGTACT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.59-31_59-27delGTACT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.59-31_59-27delGTACT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.59-31_59-27delGTACT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.59-31_59-27delGTACT
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10452
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3183
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: TTACTG
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

3-179047375-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047375
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047375
    reference: chr 3
allele count: 2
allele frequency: 1.656397005234214e-5
allele num: 120744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.59-31G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.59-31G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.59-31G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.59-31G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.235-31G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.59-31G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.59-31G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.59-31G>A
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8578
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10472
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3177
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3372
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

3-179047380-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047380
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047380
    reference: chr 3
allele count: 1
allele frequency: 8.276090374906894e-6
allele num: 120830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.235-26T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.59-26T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.59-26T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.59-26T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.59-26T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.59-26T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.59-26T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.59-26T>A
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP

3-179047386-ATTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047386
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047383
    reference: chr 3
allele count: 1
allele frequency: 8.269109913008963e-6
allele num: 120932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.59-17_59-15delTTT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.59-17_59-15delTTT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.59-17_59-15delTTT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.235-17_235-15delTTT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.59-17_59-15delTTT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.59-17_59-15delTTT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.59-17_59-15delTTT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.59-17_59-15delTTT
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10493
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: ATTT
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

3-179047393-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047393
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047393
    reference: chr 3
allele count: 2
allele frequency: 1.653138483410755e-5
allele num: 120982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.235-13A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.59-13A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.59-13A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.59-13A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.59-13A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.59-13A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.59-13A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.59-13A>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10496
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-179047399-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047399
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047399
    reference: chr 3
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.59-7T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.59-7T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.59-7T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.59-7T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.235-7T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.59-7T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.59-7T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.59-7T>C
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27209
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
hgvs: c.59-7T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

3-179047406-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047406
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047406
    reference: chr 3
allele count: 1
allele frequency: 8.25722920416825e-6
allele num: 121106
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.59A>G
  hgvsp: ENSP00000418628.1:p.Asp20Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.59A>G
  hgvsp: ENSP00000325634.3:p.Asp20Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.235A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.59A>G
  hgvsp: ENSP00000418870.1:p.Asp20Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.59A>G
  hgvsp: ENSP00000418766.1:p.Asp20Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.59A>G
  hgvsp: ENSP00000419650.1:p.Asp20Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.59A>G
  hgvsp: ENSP00000417740.1:p.Asp20Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.59A>G
  hgvsp: ENSP00000417232.1:p.Asp20Gly
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4308
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp20Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/3-179047409-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047409
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047409
    reference: chr 3
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.62C>A
  hgvsp: ENSP00000419650.1:p.Ser21Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.62C>A
  hgvsp: ENSP00000417740.1:p.Ser21Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.62C>A
  hgvsp: ENSP00000418628.1:p.Ser21Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.62C>A
  hgvsp: ENSP00000418870.1:p.Ser21Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.62C>A
  hgvsp: ENSP00000325634.3:p.Ser21Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.62C>A
  hgvsp: ENSP00000417232.1:p.Ser21Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.62C>A
  hgvsp: ENSP00000418766.1:p.Ser21Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.238C>A
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3380
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3171
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser21Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

3-179047410-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047410
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047410
    reference: chr 3
allele count: 1
allele frequency: 8.255865792645674e-6
allele num: 121126
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.63C>T
  hgvsp: ENST00000326361.3:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.63C>T
  hgvsp: ENST00000466264.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.239C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.63C>T
  hgvsp: ENST00000491818.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.63C>T
  hgvsp: ENST00000484866.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.63C>T
  hgvsp: ENST00000481587.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.63C>T
  hgvsp: ENST00000496856.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.63C>T
  hgvsp: ENST00000494234.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16244
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8573
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser21Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

3-179047412-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047412
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047412
    reference: chr 3
allele count: 1
allele frequency: 8.255865792645674e-6
allele num: 121126
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.65C>G
  hgvsp: ENSP00000417740.1:p.Ser22Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.65C>G
  hgvsp: ENSP00000418766.1:p.Ser22Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.65C>G
  hgvsp: ENSP00000417232.1:p.Ser22Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.65C>G
  hgvsp: ENSP00000325634.3:p.Ser22Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.65C>G
  hgvsp: ENSP00000418628.1:p.Ser22Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.65C>G
  hgvsp: ENSP00000418870.1:p.Ser22Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.65C>G
  hgvsp: ENSP00000419650.1:p.Ser22Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.241C>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27283
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser22Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP

3-179047417-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047417
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047417
    reference: chr 3
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.246A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.70A>G
  hgvsp: ENSP00000418870.1:p.Ile24Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.70A>G
  hgvsp: ENSP00000417740.1:p.Ile24Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.70A>G
  hgvsp: ENSP00000419650.1:p.Ile24Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.70A>G
  hgvsp: ENSP00000325634.3:p.Ile24Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.70A>G
  hgvsp: ENSP00000418766.1:p.Ile24Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.70A>G
  hgvsp: ENSP00000418628.1:p.Ile24Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.70A>G
  hgvsp: ENSP00000417232.1:p.Ile24Val
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10503
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8572
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ile24Val
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

3-179047427-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047427
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047427
    reference: chr 3
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.80T>C
  hgvsp: ENSP00000417232.1:p.Ile27Thr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.80T>C
  hgvsp: ENSP00000417740.1:p.Ile27Thr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.80T>C
  hgvsp: ENSP00000325634.3:p.Ile27Thr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.80T>C
  hgvsp: ENSP00000418766.1:p.Ile27Thr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.80T>C
  hgvsp: ENSP00000419650.1:p.Ile27Thr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.80T>C
  hgvsp: ENSP00000418870.1:p.Ile27Thr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.80T>C
  hgvsp: ENSP00000418628.1:p.Ile27Thr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.256T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.6T>C
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4310
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile27Thr
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

3-179047471-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047471
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047471
    reference: chr 3
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.124G>A
  hgvsp: ENSP00000325634.3:p.Val42Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.124G>A
  hgvsp: ENSP00000418628.1:p.Val42Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.124G>A
  hgvsp: ENSP00000418766.1:p.Val42Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.124G>A
  hgvsp: ENSP00000417232.1:p.Val42Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.124G>A
  hgvsp: ENSP00000417740.1:p.Val42Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.50G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.124G>A
  hgvsp: ENSP00000418870.1:p.Val42Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.124G>A
  hgvsp: ENSP00000419650.1:p.Val42Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.300G>A
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val42Ile
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-179047478-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047478
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047478
    reference: chr 3
allele count: 1
allele frequency: 8.252731654177533e-6
allele num: 121172
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.131C>G
  hgvsp: ENSP00000417232.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.131C>G
  hgvsp: ENSP00000418628.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.57C>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.307C>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.131C>G
  hgvsp: ENSP00000325634.3:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.131C>G
  hgvsp: ENSP00000419650.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.131C>G
  hgvsp: ENSP00000418870.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.131C>G
  hgvsp: ENSP00000417740.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.131C>G
  hgvsp: ENSP00000418766.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10512
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3383
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser44Cys
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

3-179047480-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047480
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047480
    reference: chr 3
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.133A>G
  hgvsp: ENSP00000417740.1:p.Met45Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.133A>G
  hgvsp: ENSP00000418628.1:p.Met45Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.133A>G
  hgvsp: ENSP00000419650.1:p.Met45Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.133A>G
  hgvsp: ENSP00000325634.3:p.Met45Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.59A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.133A>G
  hgvsp: ENSP00000418766.1:p.Met45Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.133A>G
  hgvsp: ENSP00000417232.1:p.Met45Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.133A>G
  hgvsp: ENSP00000418870.1:p.Met45Val
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.309A>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3172
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met45Val
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

3-179047493-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047493
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047493
    reference: chr 3
allele count: 2
allele frequency: 1.65174589541145e-5
allele num: 121084
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.146A>G
  hgvsp: ENSP00000417232.1:p.Asp49Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.72A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.322A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.146A>G
  hgvsp: ENSP00000418628.1:p.Asp49Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.146A>G
  hgvsp: ENSP00000417740.1:p.Asp49Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.146A>G
  hgvsp: ENSP00000325634.3:p.Asp49Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.146A>G
  hgvsp: ENSP00000418766.1:p.Asp49Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.146A>G
  hgvsp: ENSP00000419650.1:p.Asp49Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.146A>G
  hgvsp: ENSP00000418870.1:p.Asp49Gly
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27161
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10503
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp49Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

3-179047507-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047507
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047507
    reference: chr 3
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.86G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.160G>A
  hgvsp: ENSP00000418870.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.160G>A
  hgvsp: ENSP00000418628.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.160G>A
  hgvsp: ENSP00000417232.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.160G>A
  hgvsp: ENSP00000419650.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.336G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.160G>A
  hgvsp: ENSP00000417740.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.160G>A
  hgvsp: ENSP00000325634.3:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.160G>A
  hgvsp: ENSP00000418766.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10493
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27072
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8568
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asp54Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

3-179047508-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047508
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047508
    reference: chr 3
allele count: 2
allele frequency: 1.652947204866277e-5
allele num: 120996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.87A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.161A>G
  hgvsp: ENSP00000418870.1:p.Asp54Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.161A>G
  hgvsp: ENSP00000418766.1:p.Asp54Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.337A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.161A>G
  hgvsp: ENSP00000419650.1:p.Asp54Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.161A>G
  hgvsp: ENSP00000417740.1:p.Asp54Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.161A>G
  hgvsp: ENSP00000417232.1:p.Asp54Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.161A>G
  hgvsp: ENSP00000418628.1:p.Asp54Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.161A>G
  hgvsp: ENSP00000325634.3:p.Asp54Gly
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18264
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10500
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp54Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

3-179047510-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047510
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047510
    reference: chr 3
allele count: 1
allele frequency: 8.266922390132602e-6
allele num: 120964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.89A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.163A>G
  hgvsp: ENSP00000418766.1:p.Asn55Asp
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.163A>G
  hgvsp: ENSP00000418870.1:p.Asn55Asp
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.163A>G
  hgvsp: ENSP00000419650.1:p.Asn55Asp
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.163A>G
  hgvsp: ENSP00000325634.3:p.Asn55Asp
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.163A>G
  hgvsp: ENSP00000418628.1:p.Asn55Asp
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.163A>G
  hgvsp: ENSP00000417232.1:p.Asn55Asp
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.339A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.163A>G
  hgvsp: ENSP00000417740.1:p.Asn55Asp
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn55Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

3-179047524-T-TAACTTATACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047524
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047534
    reference: chr 3
allele count: 1
allele frequency: 8.287063893262618e-6
allele num: 120670
alternate allele: TAACTTATACA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6647
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10392
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3360
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-179047525-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047525
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047525
    reference: chr 3
allele count: 9
allele frequency: 7.461944085165656e-5
allele num: 120612
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.169+9A>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.169+9A>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.169+9A>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.169+9A>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.95+9A>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.169+9A>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.169+9A>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.345+9A>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.169+9A>C
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3356
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26509
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

3-179047525-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047525
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047525
    reference: chr 3
allele count: 3
allele frequency: 2.487314695055218e-5
allele num: 120612
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.169+9A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.169+9A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.95+9A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.345+9A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.169+9A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.169+9A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.169+9A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.169+9A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.169+9A>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8566
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

3-179047526-A-ACT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047526
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047528
    reference: chr 3
allele count: 1
allele frequency: 8.290361625574107e-6
allele num: 120622
alternate allele: ACT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.95+10_95+11insCT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.169+10_169+11insCT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.169+10_169+11insCT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.169+10_169+11insCT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.345+10_345+11insCT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.169+10_169+11insCT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.169+10_169+11insCT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.169+10_169+11insCT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.169+10_169+11insCT
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18092
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8557
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

3-179047526-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047526
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047526
    reference: chr 3
allele count: 3
allele frequency: 2.487108487672232e-5
allele num: 120622
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.169+10A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.169+10A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.169+10A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.95+10A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.169+10A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.345+10A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.169+10A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.169+10A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.169+10A>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10389
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

3-179047530-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047530
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047530
    reference: chr 3
allele count: 6
allele frequency: 4.980823828261195e-5
allele num: 120462
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.169+14T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.169+14T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.345+14T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.169+14T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.95+14T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.169+14T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.169+14T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.169+14T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.169+14T>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26361
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4287
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-179047533-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047533
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047533
    reference: chr 3
allele count: 4
allele frequency: 3.323142363418849e-5
allele num: 120368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.95+17C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.169+17C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.169+17C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.169+17C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.169+17C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.169+17C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.169+17C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.345+17C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.169+17C>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4004
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6305
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4273
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum

3-179047534-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047534
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047534
    reference: chr 3
allele count: 9
allele frequency: 7.486150621350502e-5
allele num: 120222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.345+18G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.169+18G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.169+18G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.169+18G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.169+18G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.169+18G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.95+18G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.169+18G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.169+18G>A
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17881
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25812
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10256
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

3-179047537-AAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047537
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047535
    reference: chr 3
allele count: 1
allele frequency: 8.326256015719971e-6
allele num: 120102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.169+24_169+25delAT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.169+24_169+25delAT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.169+24_169+25delAT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.169+24_169+25delAT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.169+24_169+25delAT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.95+24_95+25delAT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.169+24_169+25delAT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.169+24_169+25delAT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.345+24_345+25delAT
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15928
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: AAT
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

3-179047541-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047541
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047541
    reference: chr 3
allele count: 1
allele frequency: 8.343206127250579e-6
allele num: 119858
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.169+25T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.169+25T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.95+25T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.345+25T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.169+25T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.169+25T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.169+25T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.169+25T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.169+25T>C
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9951
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

3-179047554-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179047554
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179047554
    reference: chr 3
allele count: 6
allele frequency: 5.04702141619421e-5
allele num: 118882
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.169+38T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.169+38T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.169+38T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.345+38T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.169+38T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.169+38T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.169+38T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.169+38T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.95+38T>A
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4308
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6843
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12694
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17328
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3057
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD

3-179050727-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050727
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050727
    reference: chr 3
allele count: 15
allele frequency: 9.18105031215571e-4
allele num: 16338
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.346-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.170-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.170-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.170-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.170-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.170-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.170-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.170-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.218-50A>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 19483
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8878
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

3-179050739-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050739
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050739
    reference: chr 3
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.346-38T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.170-38T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.170-38T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.170-38T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.218-38T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.170-38T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.170-38T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.170-38T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.170-38T>C
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7156
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

3-179050754-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050754
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050754
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 17334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.218-23T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.170-23T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.170-23T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.170-23T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.170-23T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.170-23T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.170-23T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.346-23T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.170-23T>C
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23328
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4199
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

3-179050755-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050755
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050755
    reference: chr 3
allele count: 1
allele frequency: 5.74052812858783e-5
allele num: 17420
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.170-22T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.170-22T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.170-22T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.170-22T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.170-22T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.218-22T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.170-22T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.170-22T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.346-22T>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23676
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19439
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

3-179050779-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050779
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050779
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 20978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.220G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.172G>A
  hgvsp: ENSP00000418628.1:p.Asp58Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.172G>A
  hgvsp: ENSP00000417740.1:p.Asp58Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.172G>A
  hgvsp: ENSP00000418766.1:p.Asp58Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.172G>A
  hgvsp: ENSP00000417232.1:p.Asp58Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.348G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.172G>A
  hgvsp: ENSP00000325634.3:p.Asp58Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.172G>A
  hgvsp: ENSP00000419650.1:p.Asp58Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.172G>A
  hgvsp: ENSP00000418870.1:p.Asp58Asn
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31607
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp58Asn
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-179050793-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050793
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050793
    reference: chr 3
allele count: 10
allele frequency: 4.553734061930783e-4
allele num: 21960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.362C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.186C>T
  hgvsp: ENST00000481587.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.186C>T
  hgvsp: ENST00000326361.3:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.186C>T
  hgvsp: ENST00000491818.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.186C>T
  hgvsp: ENST00000496856.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.234C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.186C>T
  hgvsp: ENST00000466264.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.186C>T
  hgvsp: ENST00000484866.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.186C>T
  hgvsp: ENST00000494234.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32661
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8138
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6745
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr62Thr
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

3-179050798-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050798
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050798
    reference: chr 3
allele count: 1
allele frequency: 4.461099214846538e-5
allele num: 22416
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.191C>G
  hgvsp: ENSP00000419650.1:p.Thr64Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.191C>G
  hgvsp: ENSP00000325634.3:p.Thr64Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.367C>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.191C>G
  hgvsp: ENSP00000418628.1:p.Thr64Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.191C>G
  hgvsp: ENSP00000417232.1:p.Thr64Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.191C>G
  hgvsp: ENSP00000417740.1:p.Thr64Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.191C>G
  hgvsp: ENSP00000418766.1:p.Thr64Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.239C>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.191C>G
  hgvsp: ENSP00000418870.1:p.Thr64Arg
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10367
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7040
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr64Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

3-179050799-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050799
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050799
    reference: chr 3
allele count: 1
allele frequency: 4.441286196482501e-5
allele num: 22516
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.192G>A
  hgvsp: ENST00000491818.1:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.192G>A
  hgvsp: ENST00000481587.1:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.240G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.192G>A
  hgvsp: ENST00000494234.1:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.368G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.192G>A
  hgvsp: ENST00000326361.3:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.192G>A
  hgvsp: ENST00000466264.1:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.192G>A
  hgvsp: ENST00000484866.1:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.192G>A
  hgvsp: ENST00000496856.1:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31931
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10957
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr64Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-179050806-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050806
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050806
    reference: chr 3
allele count: 2
allele frequency: 8.616232982939858e-5
allele num: 23212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.247G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.199G>T
  hgvsp: ENSP00000325634.3:p.Asp67Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.199G>T
  hgvsp: ENSP00000418870.1:p.Asp67Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.199G>T
  hgvsp: ENSP00000419650.1:p.Asp67Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.199G>T
  hgvsp: ENSP00000418628.1:p.Asp67Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.199G>T
  hgvsp: ENSP00000417740.1:p.Asp67Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.199G>T
  hgvsp: ENSP00000418766.1:p.Asp67Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.199G>T
  hgvsp: ENSP00000417232.1:p.Asp67Tyr
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.375G>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29896
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14480
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp67Tyr
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

3-179050809-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050809
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050809
    reference: chr 3
allele count: 1
allele frequency: 4.254232961796988e-5
allele num: 23506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.202T>C
  hgvsp: ENST00000494234.1:c.202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.250T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.202T>C
  hgvsp: ENST00000491818.1:c.202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.202T>C
  hgvsp: ENST00000496856.1:c.202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.202T>C
  hgvsp: ENST00000326361.3:c.202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.202T>C
  hgvsp: ENST00000481587.1:c.202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.202T>C
  hgvsp: ENST00000466264.1:c.202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.378T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.202T>C
  hgvsp: ENST00000484866.1:c.202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29028
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13083
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu68Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

3-179050815-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050815
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050815
    reference: chr 3
allele count: 4
allele frequency: 1.641092967916633e-4
allele num: 24374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.208A>G
  hgvsp: ENSP00000418870.1:p.Lys70Glu
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.256A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.208A>G
  hgvsp: ENSP00000418766.1:p.Lys70Glu
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.208A>G
  hgvsp: ENSP00000418628.1:p.Lys70Glu
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.208A>G
  hgvsp: ENSP00000417740.1:p.Lys70Glu
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.208A>G
  hgvsp: ENSP00000419650.1:p.Lys70Glu
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.208A>G
  hgvsp: ENSP00000417232.1:p.Lys70Glu
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.208A>G
  hgvsp: ENSP00000325634.3:p.Lys70Glu
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.384A>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26915
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18317
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys70Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

3-179050831-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050831
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050831
    reference: chr 3
allele count: 1
allele frequency: 3.734687780101583e-5
allele num: 26776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.224T>A
  hgvsp: ENSP00000418870.1:p.Ile75Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.224T>A
  hgvsp: ENSP00000418628.1:p.Ile75Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.272T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.400T>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.224T>A
  hgvsp: ENSP00000418766.1:p.Ile75Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.224T>A
  hgvsp: ENSP00000325634.3:p.Ile75Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.224T>A
  hgvsp: ENSP00000417740.1:p.Ile75Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.224T>A
  hgvsp: ENSP00000419650.1:p.Ile75Asn
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.224T>A
  hgvsp: ENSP00000417232.1:p.Ile75Asn
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20998
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile75Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

3-179050859-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050859
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050859
    reference: chr 3
allele count: 1270
allele frequency: 3.275390725744055e-2
allele num: 38774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.252C>T
  hgvsp: ENST00000494234.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.252C>T
  hgvsp: ENST00000481587.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.300C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.252C>T
  hgvsp: ENST00000491818.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.252C>T
  hgvsp: ENST00000326361.3:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.252C>T
  hgvsp: ENST00000496856.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.252C>T
  hgvsp: ENST00000466264.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.252C>T
  hgvsp: ENST00000484866.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.428C>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 9253
  bin: 2.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 1.25e1
  variant carriers: 383
genotype depth: GenotypeDepth
  all individuals: 33601
  bin: 7.5e0
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.75e1
  variant carriers: 225
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 7.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 6.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 38
hgvs: p.Tyr84Tyr
num of homozygotes: 70
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

3-179050871-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050871
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050871
    reference: chr 3
allele count: 2
allele frequency: 4.141987325518784e-5
allele num: 48286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.264T>C
  hgvsp: ENST00000496856.1:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.264T>C
  hgvsp: ENST00000494234.1:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.264T>C
  hgvsp: ENST00000466264.1:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.264T>C
  hgvsp: ENST00000481587.1:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.264T>C
  hgvsp: ENST00000484866.1:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.312T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.440T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.264T>C
  hgvsp: ENST00000491818.1:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.264T>C
  hgvsp: ENST00000326361.3:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5209
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser88Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

3-179050874-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050874
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050874
    reference: chr 3
allele count: 3
allele frequency: 5.806526535826269e-5
allele num: 51666
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.315T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.443T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.267T>C
  hgvsp: ENST00000491818.1:c.267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.267T>C
  hgvsp: ENST00000496856.1:c.267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.267T>C
  hgvsp: ENST00000466264.1:c.267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.267T>C
  hgvsp: ENST00000326361.3:c.267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.267T>C
  hgvsp: ENST00000494234.1:c.267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.267T>C
  hgvsp: ENST00000481587.1:c.267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.267T>C
  hgvsp: ENST00000484866.1:c.267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31458
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro89Pro
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

3-179050879-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050879
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050879
    reference: chr 3
allele count: 1
allele frequency: 1.755802928679285e-5
allele num: 56954
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.272T>G
  hgvsp: ENSP00000417740.1:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.272T>G
  hgvsp: ENSP00000418628.1:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.272T>G
  hgvsp: ENSP00000325634.3:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.448T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.272T>G
  hgvsp: ENSP00000417232.1:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.320T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.272T>G
  hgvsp: ENSP00000418766.1:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.272T>G
  hgvsp: ENSP00000418870.1:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.272T>G
  hgvsp: ENSP00000419650.1:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5334
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1974
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu91Arg
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

3-179050891-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050891
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050891
    reference: chr 3
allele count: 1
allele frequency: 1.402406529604802e-5
allele num: 71306
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.284A>G
  hgvsp: ENSP00000419650.1:p.Asp95Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.284A>G
  hgvsp: ENSP00000325634.3:p.Asp95Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.284A>G
  hgvsp: ENSP00000418628.1:p.Asp95Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.284A>G
  hgvsp: ENSP00000417232.1:p.Asp95Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.332A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.284A>G
  hgvsp: ENSP00000418870.1:p.Asp95Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.284A>G
  hgvsp: ENSP00000418766.1:p.Asp95Gly
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.460A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.284A>G
  hgvsp: ENSP00000417740.1:p.Asp95Gly
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1905
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp95Gly
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

3-179050903-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050903
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050903
    reference: chr 3
allele count: 2
allele frequency: 2.261522456917997e-5
allele num: 88436
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.296T>C
  hgvsp: ENSP00000418766.1:p.Phe99Ser
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.296T>C
  hgvsp: ENSP00000418628.1:p.Phe99Ser
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.472T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.296T>C
  hgvsp: ENSP00000417232.1:p.Phe99Ser
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.296T>C
  hgvsp: ENSP00000325634.3:p.Phe99Ser
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.296T>C
  hgvsp: ENSP00000418870.1:p.Phe99Ser
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.296T>C
  hgvsp: ENSP00000417740.1:p.Phe99Ser
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.344T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.296T>C
  hgvsp: ENSP00000419650.1:p.Phe99Ser
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe99Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

3-179050907-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050907
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050907
    reference: chr 3
allele count: 1
allele frequency: 1.076959527860943e-5
allele num: 92854
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.300T>G
  hgvsp: ENST00000326361.3:c.300T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.300T>G
  hgvsp: ENST00000491818.1:c.300T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.300T>G
  hgvsp: ENST00000494234.1:c.300T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.300T>G
  hgvsp: ENST00000466264.1:c.300T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.300T>G
  hgvsp: ENST00000496856.1:c.300T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.300T>G
  hgvsp: ENST00000484866.1:c.300T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.348T>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.300T>G
  hgvsp: ENST00000481587.1:c.300T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.476T>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser100Ser
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

3-179050908-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050908
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050908
    reference: chr 3
allele count: 1
allele frequency: 1.066393669887175e-5
allele num: 93774
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.301A>G
  hgvsp: ENSP00000418870.1:p.Thr101Ala
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.301A>G
  hgvsp: ENSP00000417232.1:p.Thr101Ala
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.301A>G
  hgvsp: ENSP00000417740.1:p.Thr101Ala
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.349A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.301A>G
  hgvsp: ENSP00000418766.1:p.Thr101Ala
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.301A>G
  hgvsp: ENSP00000325634.3:p.Thr101Ala
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.301A>G
  hgvsp: ENSP00000418628.1:p.Thr101Ala
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.477A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.301A>G
  hgvsp: ENSP00000419650.1:p.Thr101Ala
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32966
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1951
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr101Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

http://identifiers.org/exac.variant/3-179050909-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050909
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050909
    reference: chr 3
allele count: 1
allele frequency: 1.054629824931449e-5
allele num: 94820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.302C>A
  hgvsp: ENSP00000417740.1:p.Thr101Lys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.302C>A
  hgvsp: ENSP00000419650.1:p.Thr101Lys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.302C>A
  hgvsp: ENSP00000418628.1:p.Thr101Lys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.302C>A
  hgvsp: ENSP00000325634.3:p.Thr101Lys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.350C>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.302C>A
  hgvsp: ENSP00000418766.1:p.Thr101Lys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.478C>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.302C>A
  hgvsp: ENSP00000418870.1:p.Thr101Lys
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.302C>A
  hgvsp: ENSP00000417232.1:p.Thr101Lys
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33380
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12919
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13630
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr101Lys
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

3-179050909-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050909
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050909
    reference: chr 3
allele count: 1
allele frequency: 1.054629824931449e-5
allele num: 94820
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.302C>T
  hgvsp: ENSP00000419650.1:p.Thr101Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.302C>T
  hgvsp: ENSP00000417740.1:p.Thr101Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.302C>T
  hgvsp: ENSP00000417232.1:p.Thr101Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.302C>T
  hgvsp: ENSP00000418628.1:p.Thr101Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.302C>T
  hgvsp: ENSP00000325634.3:p.Thr101Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.350C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.302C>T
  hgvsp: ENSP00000418766.1:p.Thr101Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.302C>T
  hgvsp: ENSP00000418870.1:p.Thr101Ile
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000483460
  gene symbol: ZNF639
  hgvsc: ENST00000483460.1:n.478C>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12919
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33380
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr101Ile
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

3-179050911-G-GAAAAATCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050911
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050919
    reference: chr 3
allele count: 1
allele frequency: 1.030226855953681e-5
allele num: 97066
alternate allele: GAAAAATCT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304_304+1insAAAAATCT
  hgvsp: ENSP00000419650.1:p.Ala105LysfsTer7
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304_304+1insAAAAATCT
  hgvsp: ENSP00000418870.1:p.Ala105LysfsTer7
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304_304+1insAAAAATCT
  hgvsp: ENSP00000417740.1:p.Ala105LysfsTer7
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304_304+1insAAAAATCT
  hgvsp: ENSP00000325634.3:p.Ala105LysfsTer7
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352_352+1insAAAAATCT
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304_304+1insAAAAATCT
  hgvsp: ENSP00000418766.1:p.Ala105LysfsTer7
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304_304+1insAAAAATCT
  hgvsp: ENSP00000417232.1:p.Ala105LysfsTer7
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304_304+1insAAAAATCT
  hgvsp: ENSP00000418628.1:p.Ala105LysfsTer7
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34209
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala105LysfsTer7
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-179050912-G-GCTGATATTGTAAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050912
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050925
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 98084
alternate allele: GCTGATATTGTAAT
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: splice donor
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11407
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34682
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12163
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 1
hgvs: c.304+1_304+2insCTGATATTGTAAT
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

3-179050916-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050916
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050916
    reference: chr 3
allele count: 1
allele frequency: 9.859793733115103e-6
allele num: 101422
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+5G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+5G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+5G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+5G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+5G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+5G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+5G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+5G>A
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9671
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
hgvs: c.304+5G>A
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

3-179050916-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050916
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050916
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 101422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+5G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+5G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+5G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+5G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+5G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+5G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+5G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+5G>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: splice region
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9671
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10448
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
hgvs: c.304+5G>T
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

3-179050917-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050917
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050917
    reference: chr 3
allele count: 3
allele frequency: 2.933755794167693e-5
allele num: 102258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+6G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+6G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+6G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+6G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+6G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+6G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+6G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+6G>A
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 3.75e1
  variant carriers: 0
hgvs: c.304+6G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-179050917-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050917
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050917
    reference: chr 3
allele count: 1
allele frequency: 9.779185980558979e-6
allele num: 102258
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+6G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+6G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+6G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+6G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+6G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+6G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+6G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+6G>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
hgvs: c.304+6G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

3-179050918-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050918
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050918
    reference: chr 3
allele count: 1
allele frequency: 9.73179181750944e-6
allele num: 102756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+7G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+7G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+7G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+7G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+7G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+7G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+7G>A
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+7G>A
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9915
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 3.75e1
  variant carriers: 0
hgvs: c.304+7G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

3-179050919-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050919
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050919
    reference: chr 3
allele count: 2
allele frequency: 1.938735944164405e-5
allele num: 103160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+8G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+8G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+8G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+8G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+8G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+8G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+8G>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+8G>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
hgvs: c.304+8G>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

3-179050941-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050941
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050941
    reference: chr 3
allele count: 1
allele frequency: 9.03570912245193e-6
allele num: 110672
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+30T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+30T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+30T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+30T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+30T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+30T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+30T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+30T>C
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35604
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

3-179050946-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050946
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050946
    reference: chr 3
allele count: 2
allele frequency: 1.788045130259088e-5
allele num: 111854
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+35T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+35T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+35T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+35T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+35T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+35T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+35T>C
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+35T>C
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37356
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36257
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5692
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-179050949-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050949
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050949
    reference: chr 3
allele count: 1
allele frequency: 8.90614702267505e-6
allele num: 112282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+38A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+38A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+38A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+38A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+38A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+38A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+38A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+38A>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5280
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

3-179050957-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050957
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050957
    reference: chr 3
allele count: 1
allele frequency: 8.821298142234612e-6
allele num: 113362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+46A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+46A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+46A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+46A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+46A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+46A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+46A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+46A>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

3-179050961-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050961
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050962
    reference: chr 3
allele count: 10
allele frequency: 8.804832091852008e-5
allele num: 113574
alternate allele: TA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+57dupA
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+57dupA
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+57dupA
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+57dupA
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+57dupA
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+57dupA
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+57dupA
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+57dupA
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2985
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8251
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37361
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4712
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-179050962-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179050962
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179050962
    reference: chr 3
allele count: 10
allele frequency: 8.800028160090112e-5
allele num: 113636
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.352+51A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.304+51A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.304+51A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.304+51A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.304+51A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.304+51A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.304+51A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.304+51A>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37307
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8315
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

3-179051007-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179051007
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179051007
    reference: chr 3
allele count: 3
allele frequency: 2.632872288141543e-5
allele num: 113944
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.305-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.305-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.353-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.305-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.305-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.305-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.305-50A>G
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.305-50A>G
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4999
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7308
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6388
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4385
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

3-179051008-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179051008
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179051008
    reference: chr 3
allele count: 1
allele frequency: 8.794610662585968e-6
allele num: 113706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.305-49C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.305-49C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.305-49C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.305-49C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.353-49C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.305-49C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.305-49C>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.305-49C>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11595
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28685
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1905
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

3-179051009-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179051009
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 179051009
    reference: chr 3
allele count: 51
allele frequency: 4.481704102077402e-4
allele num: 113796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl transcript: ENST00000466663
  gene symbol: ZNF639
  hgvsc: ENST00000466663.1:n.353-48A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417740
  ensembl transcript: ENST00000496856
  gene symbol: ZNF639
  hgvsc: ENST00000496856.1:c.305-48A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000417232
  ensembl transcript: ENST00000494234
  gene symbol: ZNF639
  hgvsc: ENST00000494234.1:c.305-48A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418766
  ensembl transcript: ENST00000484866
  gene symbol: ZNF639
  hgvsc: ENST00000484866.1:c.305-48A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418870
  ensembl transcript: ENST00000491818
  gene symbol: ZNF639
  hgvsc: ENST00000491818.1:c.305-48A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000325634
  ensembl transcript: ENST00000326361
  gene symbol: ZNF639
  hgvsc: ENST00000326361.3:c.305-48A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000418628
  ensembl transcript: ENST00000481587
  gene symbol: ZNF639
  hgvsc: ENST00000481587.1:c.305-48A>T
  variant of: http://identifiers.org/hgnc/30950
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121864
  ensembl protein: ENSP00000419650
  ensembl transcript: ENST00000466264
  gene symbol: ZNF639
  hgvsc: ENST00000466264.1:c.305-48A>T
  variant of: http://identifiers.org/hgnc/30950
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5240
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21583
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11598
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1919
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2439
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: FS

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26152
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10413
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3176
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3373
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8581
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.66e-1

QD
type: SiteQuality
SIO_000300: 1.324e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.86e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.472e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.061867e6

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4315
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26309
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3372
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8579
bin: 9.75e1
variant carriers: 9

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.455868089233754e-4
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.112e1

MQRankSum
type: SiteQuality
SIO_000300: -4.273e0

DP
type: SiteQuality
SIO_000300: 2.062867e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

FS
type: SiteQuality
SIO_000300: 7.504e0

QD
type: SiteQuality
SIO_000300: 9.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26700
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.316423442205235e-4
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.894e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e-1

FS
type: SiteQuality
SIO_000300: 7.797e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 1.07e1

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 2.065992e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.34e0

GenotypeQuality
all individuals: 8572
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 80
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26899
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3170
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4303
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3372
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10479
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503216884132043e-5
allele num: 66524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

VQSLOD
type: SiteQuality
SIO_000300: -1.165e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.486e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQ
type: SiteQuality
SIO_000300: 5.677e1

FS
type: SiteQuality
SIO_000300: 2.136e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.804e0

DP
type: SiteQuality
SIO_000300: 2.068119e6

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8573
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1997
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3375
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3169
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.428e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.069558e6

MQ
type: SiteQuality
SIO_000300: 5.566e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 1.676e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

GenotypeQuality
all individuals: 3375
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1997
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4303
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27130
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8572
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3172
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.877518767285657e-5
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

DP
type: SiteQuality
SIO_000300: 2.070536e6

FS
type: SiteQuality
SIO_000300: 2.617e0

QD
type: SiteQuality
SIO_000300: 1.363e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.366e0

GenotypeQuality
all individuals: 8574
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3170
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10508
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4307
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.463e1

FS
type: SiteQuality
SIO_000300: 3.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.99e-1

DP
type: SiteQuality
SIO_000300: 2.07164e6

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10503
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1997
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3171
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8574
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

VQSLOD
type: SiteQuality
SIO_000300: 5.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e0

DP
type: SiteQuality
SIO_000300: 2.072424e6

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.611e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4306
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10502
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 8573
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27278
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

QD
type: SiteQuality
SIO_000300: 1.266e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.697e0

FS
type: SiteQuality
SIO_000300: 6.329e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.59e-1

DP
type: SiteQuality
SIO_000300: 2.072557e6

GenotypeQuality
all individuals: 3380
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
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GenotypeQuality
all individuals: 7
bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.211e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.23e-1

FS
type: SiteQuality
SIO_000300: 4.698e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.36e-1

DP
type: SiteQuality
SIO_000300: 2.072533e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1996
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

MQRankSum
type: SiteQuality
SIO_000300: -1.093e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: -2.34e0

QD
type: SiteQuality
SIO_000300: 1.501e1

FS
type: SiteQuality
SIO_000300: 1.7539e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.66e-1

DP
type: SiteQuality
SIO_000300: 2.072733e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 1996
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

DP
type: SiteQuality
SIO_000300: 2.073057e6

QD
type: SiteQuality
SIO_000300: 1.431e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 7.746e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
SIO_000300: 3.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.15e0

GenotypeQuality
all individuals: 86
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 5.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e0

VQSLOD
type: SiteQuality
SIO_000300: -7.524e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.444e1

DP
type: SiteQuality
SIO_000300: 2.073414e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.783e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.14e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.114e0

DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.547e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-3

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: -5.19e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.578e0

QD
type: SiteQuality
SIO_000300: 1.203e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

DP
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 8.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000930288389401e-5
allele num: 66646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.26e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.985e1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
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QD
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DP
type: SiteQuality
SIO_000300: 2.071663e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.879470460383324e-5
allele num: 10122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.887e1

FS
type: SiteQuality
SIO_000300: 3.781e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

BaseQRankSum
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SIO_000300: -3.006e0

VQSLOD
type: SiteQuality
SIO_000300: -6.784e-1

DP
type: SiteQuality
SIO_000300: 2.070263e6

QD
type: SiteQuality
SIO_000300: 9.720000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001921229586936e-5
allele num: 66624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.070299e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.72e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

FS
type: SiteQuality
SIO_000300: 1.668e0

VQSLOD
type: SiteQuality
SIO_000300: 1.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 2.069707e6

MQRankSum
type: SiteQuality
SIO_000300: 1.86e0

QD
type: SiteQuality
SIO_000300: 1.316e1

ReadPosRankSum
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SIO_000300: 1.15e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504030802550836e-5
allele num: 66488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.062518e6

MQRankSum
type: SiteQuality
SIO_000300: -1.001e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 5.35e1

VQSLOD
type: SiteQuality
SIO_000300: 4.88e-1

QD
type: SiteQuality
SIO_000300: 4.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.782774126599793e-4
allele num: 11564
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.67e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

DP
type: SiteQuality
SIO_000300: 2.06139e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.24e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.769e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.216249087813184e-4
allele num: 16444
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.000400160064026e-4
allele num: 9996
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.24e-1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504755025881786e-5
allele num: 66456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
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East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.060824e6

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 4.196e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.51426507764536e-5
allele num: 66456
num of homozygotes: 0

South Asian
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African
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Latino
type: Population
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.949270326615705e-4
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.24e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.065e1

VQSLOD
type: SiteQuality
SIO_000300: -1.123e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.02e0

DP
type: SiteQuality
SIO_000300: 2.057568e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3148
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8549
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 25974
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.003210272873194e-4
allele num: 9968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.52502337928746e-5
allele num: 66298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.576e0

QD
type: SiteQuality
SIO_000300: 1.41e1

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

DP
type: SiteQuality
SIO_000300: 2.052607e6

FS
type: SiteQuality
SIO_000300: 4.234e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.67e-1

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.057401812688822e-4
allele num: 66200
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.220107369448512e-4
allele num: 16392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.249e0

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e-1

DP
type: SiteQuality
SIO_000300: 2.050719e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 1.392e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10237
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.104260774020266e-5
allele num: 16382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

MQ
type: SiteQuality
SIO_000300: 6.067e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.085e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.16e0

DP
type: SiteQuality
SIO_000300: 2.042423e6

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.3e-2

GenotypeQuality
all individuals: 1885
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3132
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3271
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variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66010
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164958061509786e-4
allele num: 8584
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.15e-1

QD
type: SiteQuality
SIO_000300: 1.488e1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.92e0

FS
type: SiteQuality
SIO_000300: 2.352e0

DP
type: SiteQuality
SIO_000300: 2.025433e6

VQSLOD
type: SiteQuality
SIO_000300: -9.421e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 2679
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 5.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1959
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 454
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variant carriers: 0

GenotypeQuality
all individuals: 7943
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.698224852071006e-4
allele num: 16224
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 1.90491e6

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

QD
type: SiteQuality
SIO_000300: 1.651e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 17

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 167
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variant carriers: 2

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 6.029285099052541e-3
allele num: 2322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 6.097560975609756e-3
allele num: 164
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.32e-2

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
SIO_000300: 3.41e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 1.615e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 39
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GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2336
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.032520325203252e-4
allele num: 4920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7990
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.64e-2

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.144e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

DP
type: SiteQuality
SIO_000300: 2.97557e5

QD
type: SiteQuality
SIO_000300: 6.38e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2766
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GenotypeQuality
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GenotypeQuality
all individuals: 253
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GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5356
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.290000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.487e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.29442e5

GenotypeQuality
all individuals: 621
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
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GenotypeQuality
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GenotypeQuality
all individuals: 2790
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GenotypeQuality
all individuals: 4063
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GenotypeQuality
all individuals: 103
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 411
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GenotypeQuality
all individuals: 114
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GenotypeQuality
all individuals: 440
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 172
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variant carriers: 0

GenotypeQuality
all individuals: 195
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.853911753800519e-4
allele num: 5394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2452
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.32e-2

FS
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QD
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ReadPosRankSum
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SIO_000300: -3.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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DP
type: SiteQuality
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BaseQRankSum
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SIO_000300: 5.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2876
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 9242
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.04e-2

FS
type: SiteQuality
SIO_000300: 8.24e-1

QD
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
type: SiteQuality
SIO_000300: 4.18835e5

ReadPosRankSum
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -1.231e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 5.121638924455825e-4
allele num: 7810
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 2974
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 6.240898689411275e-4
allele num: 9614
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.2e-2

FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -6.68e-2

QD
type: SiteQuality
SIO_000300: 1.311e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-2

DP
type: SiteQuality
SIO_000300: 4.60597e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3038
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.262626262626263e-4
allele num: 7920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9832
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.46e0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
SIO_000300: 1.504e1

VQSLOD
type: SiteQuality
SIO_000300: -1.188e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.29e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e-1

DP
type: SiteQuality
SIO_000300: 4.79743e5

ClippingRankSum
type: SiteQuality
SIO_000300: 6.56e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.013376570733685e-4
allele num: 9868
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7960
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.928e0

MQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

DP
type: SiteQuality
SIO_000300: 4.84744e5

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.11e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 1.955416503715291e-4
allele num: 10228
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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QD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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FS
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

East Asian
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African
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allele frequency: 0.0e0
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Latino
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South Asian
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Other
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num of homozygotes: 0

European (Finnish)
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ReadPosRankSum
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MQ
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FS
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DP
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Other
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Latino
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East Asian
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African
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South Asian
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ReadPosRankSum
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MQ
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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FS
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MQRankSum
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QD
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 3466
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele num: 750
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East Asian
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.664e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.87e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

DP
type: SiteQuality
SIO_000300: 5.96572e5

QD
type: SiteQuality
SIO_000300: 4.04e0

GenotypeQuality
all individuals: 1389
bin: 3.25e1
variant carriers: 7

GenotypeQuality
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bin: 5.25e1
variant carriers: 17

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 17

GenotypeQuality
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bin: 1.25e1
variant carriers: 4

GenotypeQuality
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bin: 2.75e1
variant carriers: 8

GenotypeQuality
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bin: 1.75e1
variant carriers: 20

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 19

GenotypeQuality
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bin: 3.75e1
variant carriers: 7

GenotypeQuality
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bin: 7.75e1
variant carriers: 24

GenotypeQuality
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bin: 5.75e1
variant carriers: 17

GenotypeQuality
all individuals: 2897
bin: 9.75e1
variant carriers: 1180

GenotypeQuality
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bin: 9.25e1
variant carriers: 37

GenotypeQuality
all individuals: 196
bin: 4.25e1
variant carriers: 7

GenotypeQuality
all individuals: 253
bin: 8.25e1
variant carriers: 32

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 137
allele frequency: 7.482250136537411e-3
allele num: 18310
num of homozygotes: 0

South Asian
type: Population
allele count: 24
allele frequency: 2.563554795983764e-3
allele num: 9362
num of homozygotes: 0

African
type: Population
allele count: 1015
allele frequency: 1.946682009973149e-1
allele num: 5214
num of homozygotes: 70

Other
type: Population
allele count: 4
allele frequency: 1.098901098901099e-2
allele num: 364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 4.621072088724584e-3
allele num: 2164
num of homozygotes: 0

Latino
type: Population
allele count: 80
allele frequency: 4.993757802746566e-2
allele num: 1602
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

QD
type: SiteQuality
SIO_000300: 1.446e1

VQSLOD
type: SiteQuality
SIO_000300: 6.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

DP
type: SiteQuality
SIO_000300: 7.76215e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
all individuals: 3462
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1025
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 190
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variant carriers: 0

GenotypeQuality
all individuals: 1263
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2652
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 8.264462809917355e-4
allele num: 2420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.11e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.424e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.69e-1

DP
type: SiteQuality
SIO_000300: 8.30035e5

MQRankSum
type: SiteQuality
SIO_000300: 2.29e0

GenotypeQuality
all individuals: 2764
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1895
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 751
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GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2926
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.22061191626409e-4
allele num: 6210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3486
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.26e1

FS
type: SiteQuality
SIO_000300: 1.368e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.394e0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

DP
type: SiteQuality
SIO_000300: 8.5779e5

GenotypeQuality
all individuals: 1730
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
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variant carriers: 0

GenotypeQuality
all individuals: 589
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variant carriers: 0

GenotypeQuality
all individuals: 424
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GenotypeQuality
all individuals: 439
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GenotypeQuality
all individuals: 1556
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 410
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GenotypeQuality
all individuals: 1179
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variant carriers: 0

GenotypeQuality
all individuals: 328
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variant carriers: 0

GenotypeQuality
all individuals: 1895
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16092
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3938
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.274717121127805e-5
allele num: 10782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3368
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.517e0

QD
type: SiteQuality
SIO_000300: 8.720000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -9.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.205e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

DP
type: SiteQuality
SIO_000300: 8.9909e5

GenotypeQuality
all individuals: 534
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 608
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GenotypeQuality
all individuals: 1113
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 229
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GenotypeQuality
all individuals: 679
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GenotypeQuality
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GenotypeQuality
all individuals: 127
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 417
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GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.942501942501943e-4
allele num: 5148
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.017177e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

FS
type: SiteQuality
SIO_000300: 1.1536e1

VQSLOD
type: SiteQuality
SIO_000300: -3.02e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 1.395e1

GenotypeQuality
all individuals: 1138
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 1472
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 615
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GenotypeQuality
all individuals: 407
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6020
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5656
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.385496183206107e-4
allele num: 8384
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e0

MQ
type: SiteQuality
SIO_000300: 5.893e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.379e1

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

FS
type: SiteQuality
SIO_000300: 1.094e0

DP
type: SiteQuality
SIO_000300: 1.158715e6

VQSLOD
type: SiteQuality
SIO_000300: -2.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 2.75e1
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GenotypeQuality
all individuals: 33
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1153
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GenotypeQuality
all individuals: 264
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.216048491845865e-5
allele num: 13858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49164
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 4.723e0

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -7.0e-1

MQ
type: SiteQuality
SIO_000300: 5.893e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e0

QD
type: SiteQuality
SIO_000300: 8.81e0

DP
type: SiteQuality
SIO_000300: 1.196964e6

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 228
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 371
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GenotypeQuality
all individuals: 32124
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.69606512890095e-4
allele num: 5896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13928
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

QD
type: SiteQuality
SIO_000300: 1.307e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.205141e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

FS
type: SiteQuality
SIO_000300: 3.203e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1954
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
allele num: 8768
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.985624081648862e-5
allele num: 50362
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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FS
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SIO_000300: 1.263e0

MQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.04e-1

DP
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: -4.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8768
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13996
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.985624081648862e-5
allele num: 50362
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.04e-1

QD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.263e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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MQRankSum
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SIO_000300: -2.38e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6010
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.050197405527355e-5
allele num: 14184
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.59e-1

FS
type: SiteQuality
SIO_000300: 4.675e0

VQSLOD
type: SiteQuality
SIO_000300: -7.341e-1

DP
type: SiteQuality
SIO_000300: 1.233878e6

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.346e0

MQ
type: SiteQuality
SIO_000300: 5.797e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14280
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.24244e6

QD
type: SiteQuality
SIO_000300: 2.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.139e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.087e0

FS
type: SiteQuality
SIO_000300: 5.022e0

VQSLOD
type: SiteQuality
SIO_000300: -7.875e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.797e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.089324618736383e-4
allele num: 9180
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-3

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.667e1

QD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 54262
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Latino
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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allele num: 54780
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South Asian
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African
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East Asian
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Other
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QD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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MQ
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BaseQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54780
num of homozygotes: 0

African
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South Asian
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allele frequency: 6.863417982155113e-5
allele num: 14570
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 820
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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BaseQRankSum
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FS
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DP
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ClippingRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 35205
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.81507968199804e-5
allele num: 55094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14598
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.968e0

DP
type: SiteQuality
SIO_000300: 1.282223e6

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.713e0

VQSLOD
type: SiteQuality
SIO_000300: -5.222e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.61545970570158e-5
allele num: 55318
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.175e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.778999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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MQ
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SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

DP
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SIO_000300: 1.28585e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1910
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7970
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.667333600106709e-5
allele num: 59976
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.343229e6

VQSLOD
type: SiteQuality
SIO_000300: 8.110000000000001e-1

FS
type: SiteQuality
SIO_000300: 6.465e0

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.556e1

MQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
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allele count: 2
allele frequency: 2.037489812550937e-4
allele num: 9816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60784
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 2.269e0

MQRankSum
type: SiteQuality
SIO_000300: 7.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.379999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.35355e6

QD
type: SiteQuality
SIO_000300: 1.151e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.017708121310808e-4
allele num: 9826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61096
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.12e0

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

FS
type: SiteQuality
SIO_000300: 9.961e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.358006e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.286e0

QD
type: SiteQuality
SIO_000300: 6.9e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61942
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.639224538573895e-5
allele num: 15062
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10996
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-1

QD
type: SiteQuality
SIO_000300: 5.42e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.374706e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.096e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.149e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.931e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14956
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.608027272142536e-4
allele num: 62188
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e-2

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.1496e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.213470869886565e-5
allele num: 62238
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.011736139214893e-4
allele num: 9884
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.160092807424594e-3
allele num: 862
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 2.675943270002676e-4
allele num: 14948
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.81257930034439e-4
allele num: 11034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.773e0

DP
type: SiteQuality
SIO_000300: 1.385948e6

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQ
type: SiteQuality
SIO_000300: 5.931e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
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South Asian
type: Population
allele count: 3
allele frequency: 2.252252252252252e-4
allele num: 13320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63822
num of homozygotes: 0

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

QD
type: SiteQuality
SIO_000300: 1.536e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2787
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GenotypeQuality
all individuals: 1937
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.568725880839582e-5
allele num: 63746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.915e1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

FS
type: SiteQuality
SIO_000300: 1.59e0

QD
type: SiteQuality
SIO_000300: 1.107e1

DP
type: SiteQuality
SIO_000300: 1.499431e6

MQRankSum
type: SiteQuality
SIO_000300: -3.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.182e0

GenotypeQuality
all individuals: 2874
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6228
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4479
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28642
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1875
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2826
bin: 9.75e1
variant carriers: 50

GenotypeQuality
all individuals: 400
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.182033096926714e-3
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9474
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.224846894138233e-3
allele num: 11430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 36
allele frequency: 5.647058823529411e-4
allele num: 63750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13284
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

FS
type: SiteQuality
SIO_000300: 0.0e0