1-161519555-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519555
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519555
    reference: chr 1
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.80T>C
  hgvsp: ENSP00000392047.1:p.Leu27Ser
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-29T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-29T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31628A>G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-29T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000410180
  ensembl transcript: ENST00000426740
  gene symbol: FCGR3A
  hgvsc: ENST00000426740.1:c.25T>C
  hgvsp: ENSP00000410180.1:p.Leu9Ser
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1087T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.80T>C
  hgvsp: ENSP00000356946.3:p.Leu27Ser
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3247
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu27Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/1-161519556-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519556
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519556
    reference: chr 1
allele count: 5
allele frequency: 4.119566292060772e-5
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-30T>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1088T>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-30T>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000410180
  ensembl transcript: ENST00000426740
  gene symbol: FCGR3A
  hgvsc: ENST00000426740.1:c.24T>G
  hgvsp: ENSP00000410180.1:p.Leu9Val
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.79T>G
  hgvsp: ENSP00000392047.1:p.Leu27Val
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.79T>G
  hgvsp: ENSP00000356946.3:p.Leu27Val
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-30T>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31629A>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3776
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu27Val
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

1-161519562-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519562
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519562
    reference: chr 1
allele count: 4
allele frequency: 3.295598727898891e-5
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000410180
  ensembl transcript: ENST00000426740
  gene symbol: FCGR3A
  hgvsc: ENST00000426740.1:c.18A>C
  hgvsp: ENSP00000410180.1:p.Ile7Leu
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31635T>G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-36A>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1094A>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.73A>C
  hgvsp: ENSP00000356946.3:p.Ile25Leu
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-36A>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.73A>C
  hgvsp: ENSP00000392047.1:p.Ile25Leu
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-36A>C
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30752
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9997
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7342
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Ile25Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS

1-161519564-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519564
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519564
    reference: chr 1
allele count: 13
allele frequency: 1.071087235935801e-4
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.71G>A
  hgvsp: ENSP00000392047.1:p.Arg24Gln
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.71G>A
  hgvsp: ENSP00000356946.3:p.Arg24Gln
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31637C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000410180
  ensembl transcript: ENST00000426740
  gene symbol: FCGR3A
  hgvsc: ENST00000426740.1:c.16G>A
  hgvsp: ENSP00000410180.1:p.Arg6Gln
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1096G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-38G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3241
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3771
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg24Gln
num of homozygotes: 1
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-161519565-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519565
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519565
    reference: chr 1
allele count: 4
allele frequency: 3.295544423938835e-5
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.70C>T
  hgvsp: ENSP00000392047.1:p.Arg24Trp
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1097C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.70C>T
  hgvsp: ENSP00000356946.3:p.Arg24Trp
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-39C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31638G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000410180
  ensembl transcript: ENST00000426740
  gene symbol: FCGR3A
  hgvsc: ENST00000426740.1:c.15C>T
  hgvsp: ENSP00000410180.1:p.Arg6Trp
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7334
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9990
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg24Trp
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

1-161519566-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519566
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519565
    reference: chr 1
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1099delT
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-41delT
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000410180
  ensembl transcript: ENST00000426740
  gene symbol: FCGR3A
  hgvsc: ENST00000426740.1:c.13delT
  hgvsp: ENSP00000410180.1:p.Leu5ProfsTer6
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.68delT
  hgvsp: ENSP00000392047.1:p.Leu23ProfsTer6
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.68delT
  hgvsp: ENSP00000356946.3:p.Leu23ProfsTer6
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-41delT
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-41delT
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31640delA
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5630
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu23ProfsTer6
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: GA
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

1-161519568-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519568
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519568
    reference: chr 1
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-42C>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-42C>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1100C>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000410180
  ensembl transcript: ENST00000426740
  gene symbol: FCGR3A
  hgvsc: ENST00000426740.1:c.12C>A
  hgvsp: ENSP00000410180.1:p.Leu5Ile
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.67C>A
  hgvsp: ENSP00000392047.1:p.Leu23Ile
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.67C>A
  hgvsp: ENSP00000356946.3:p.Leu23Ile
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31641G>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-42C>A
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1643
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9993
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3771
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu23Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

1-161519576-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519576
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519576
    reference: chr 1
allele count: 10
allele frequency: 8.239132584121544e-5
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31649G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.59C>T
  hgvsp: ENSP00000392047.1:p.Pro20Leu
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000410180
  ensembl transcript: ENST00000426740
  gene symbol: FCGR3A
  hgvsc: ENST00000426740.1:c.4C>T
  hgvsp: ENSP00000410180.1:p.Pro2Leu
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-6C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1108C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.59C>T
  hgvsp: ENSP00000356946.3:p.Pro20Leu
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-50C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-6C>T
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2668
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7330
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 3767
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro20Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

1-161519577-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519577
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519577
    reference: chr 1
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-51C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31650G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000410180
  ensembl transcript: ENST00000426740
  gene symbol: FCGR3A
  hgvsc: ENST00000426740.1:c.3C>T
  hgvsp: ENSP00000410180.1:p.Pro2Ser
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1109C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.58C>T
  hgvsp: ENSP00000356946.3:p.Pro20Ser
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.58C>T
  hgvsp: ENSP00000392047.1:p.Pro20Ser
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-7C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-7C>T
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13814
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9987
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro20Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-161519581-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519581
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519581
    reference: chr 1
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.54G>C
  hgvsp: ENSP00000356946.3:p.Leu18Phe
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-55G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-11G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.54G>C
  hgvsp: ENSP00000392047.1:p.Leu18Phe
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-11G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31654C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1113G>C
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3769
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu18Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

1-161519584-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519584
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519584
    reference: chr 1
allele count: 4
allele frequency: 3.296956908773203e-5
allele num: 121324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1116T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-14T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.51T>C
  hgvsp: ENST00000443193.1:c.51T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-58T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-14T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31657A>G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.51T>C
  hgvsp: ENST00000367969.3:c.51T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21715
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7293
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly17Gly
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

1-161519586-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519586
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519586
    reference: chr 1
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-16G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31659C>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.49G>C
  hgvsp: ENSP00000356946.3:p.Gly17Arg
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-16G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-60G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.49G>C
  hgvsp: ENSP00000392047.1:p.Gly17Arg
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1118G>C
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3771
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9994
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2657
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly17Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-161519586-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519586
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519586
    reference: chr 1
allele count: 22
allele frequency: 1.812878026270251e-4
allele num: 121354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1118G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31659C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.49G>A
  hgvsp: ENSP00000392047.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-16G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-60G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.49G>A
  hgvsp: ENSP00000356946.3:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-16G>A
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7305
  bin: 9.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3771
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly17Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/1-161519589-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519589
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519589
    reference: chr 1
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.46G>T
  hgvsp: ENSP00000392047.1:p.Val16Phe
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-19G>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1121G>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.46G>T
  hgvsp: ENSP00000356946.3:p.Val16Phe
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-1G>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31662C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-19G>T
  variant of: http://identifiers.org/hgnc/3619
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10002
  bin: 6.75e1
  variant carriers: 0
hgvs: c.-62-1G>T
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

1-161519601-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519601
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519601
    reference: chr 1
allele count: 8
allele frequency: 6.595435958316844e-5
allele num: 121296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-31T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.34T>C
  hgvsp: ENSP00000392047.1:p.Ser12Pro
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.34T>C
  hgvsp: ENSP00000356946.3:p.Ser12Pro
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31674A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1133T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-31T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-13T>C
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10000
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1639
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser12Pro
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

1-161519602-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519602
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519602
    reference: chr 1
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-14T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-32T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-32T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31675A>G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.33T>C
  hgvsp: ENST00000367969.3:c.33T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.33T>C
  hgvsp: ENST00000443193.1:c.33T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1134T>C
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr11Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

1-161519603-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519603
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519603
    reference: chr 1
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31676G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-33C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1135C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.32C>T
  hgvsp: ENSP00000392047.1:p.Thr11Ile
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-33C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.32C>T
  hgvsp: ENSP00000356946.3:p.Thr11Ile
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-15C>T
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7287
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2652
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr11Ile
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD

1-161519603-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519603
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519603
    reference: chr 1
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31676G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1135C>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.32C>G
  hgvsp: ENSP00000392047.1:p.Thr11Ser
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-33C>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-15C>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-33C>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.32C>G
  hgvsp: ENSP00000356946.3:p.Thr11Ser
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2652
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3770
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr11Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-161519610-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519610
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519610
    reference: chr 1
allele count: 44
allele frequency: 3.629045561017453e-4
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.25C>T
  hgvsp: ENST00000367969.3:c.25C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-22C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.25C>T
  hgvsp: ENST00000443193.1:c.25C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-40C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-40C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31683G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1142C>T
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10000
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3227
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9988
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu9Leu
num of homozygotes: 1
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

1-161519611-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519611
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519611
    reference: chr 1
allele count: 6
allele frequency: 4.949923276189219e-5
allele num: 121214
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-41G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-41G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1143G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.24G>C
  hgvsp: ENSP00000356946.3:p.Arg8Ser
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31684C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-23G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.24G>C
  hgvsp: ENSP00000392047.1:p.Arg8Ser
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5607
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30649
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg8Ser
num of homozygotes: 1
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ

1-161519621-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519621
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519620
    reference: chr 1
allele count: 1
allele frequency: 8.260912665631299e-6
allele num: 121052
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.13delG
  hgvsp: ENSP00000392047.1:p.Ala5LeufsTer11
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31698delC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-52delG
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-52delG
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.13delG
  hgvsp: ENSP00000356946.3:p.Ala5LeufsTer11
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1154delG
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-34delG
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3754
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala5LeufsTer11
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: GC
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ

1-161519622-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519622
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519622
    reference: chr 1
allele count: 11
allele frequency: 9.09015783819519e-5
allele num: 121010
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-34G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1154G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-52G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.13G>A
  hgvsp: ENSP00000392047.1:p.Ala5Thr
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-52G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.13G>A
  hgvsp: ENSP00000356946.3:p.Ala5Thr
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31695C>T
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7262
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 30342
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala5Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-161519627-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519627
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519627
    reference: chr 1
allele count: 1
allele frequency: 8.270614506657845e-6
allele num: 120910
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1159G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.8G>C
  hgvsp: ENSP00000356946.3:p.Gly3Ala
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-57G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.8G>C
  hgvsp: ENSP00000392047.1:p.Gly3Ala
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-39G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31700C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-57G>C
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3206
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9880
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly3Ala
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-161519628-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519628
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519628
    reference: chr 1
allele count: 1
allele frequency: 8.271298593879239e-6
allele num: 120900
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-58G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.7G>A
  hgvsp: ENSP00000392047.1:p.Gly3Arg
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1160G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.7G>A
  hgvsp: ENSP00000356946.3:p.Gly3Arg
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31701C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-40G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-58G>A
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7252
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3737
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3201
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly3Arg
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

1-161519633-ATC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519633
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519631
    reference: chr 1
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: coding_sequence_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.-1_1delGA
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-47_-62-46delGA
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-65_-44-64delGA
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1167_62-1166delGA
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: coding_sequence_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.-1_1delGA
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31710_271+31711delCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-65_-44-64delGA
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: coding sequence
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3726
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: ATC
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-161519636-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519636
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519636
    reference: chr 1
allele count: 1
allele frequency: 8.29531314807134e-6
allele num: 120550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1168A>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.-2A>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-66A>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.-2A>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-48A>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-66A>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31709T>A
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP

1-161519647-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519647
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519647
    reference: chr 1
allele count: 1
allele frequency: 8.335139280177371e-6
allele num: 119974
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.-13G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-77G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31720C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-59G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-77G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1179G>A
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

1-161519650-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519650
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519650
    reference: chr 1
allele count: 1
allele frequency: 8.348778573694668e-6
allele num: 119778
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31723A>G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.-16T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1182T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-80T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-62T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.-16T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-80T>C
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2611
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3073
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9453
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-161519654-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519654
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519654
    reference: chr 1
allele count: 2
allele frequency: 1.674004385891491e-5
allele num: 119474
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31727C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1186G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-66G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-84G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-84G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.-20G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.-20G>A
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7240
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3617
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

1-161519667-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519667
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519667
    reference: chr 1
allele count: 1
allele frequency: 8.465536799688468e-6
allele num: 118126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.-33G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-97G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.-33G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1199G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-97G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31740C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-79G>A
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2493
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7232
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3540
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2931
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-161519677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519677
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519677
    reference: chr 1
allele count: 3
allele frequency: 2.561781633733541e-5
allele num: 117106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-107G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31750C>T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.-43G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-107G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.-43G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-89G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1209G>A
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9832
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8911
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4496
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13239
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

1-161519682-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519682
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519682
    reference: chr 1
allele count: 2
allele frequency: 1.717622810030917e-5
allele num: 116440
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.-48G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-112G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-112G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-94G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.-48G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31755C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1214G>C
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10870
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7941
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3091
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4331
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4838
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4425
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5683
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

1-161519684-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161519684
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161519684
    reference: chr 1
allele count: 1
allele frequency: 8.650219715580775e-6
allele num: 115604
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000392047
  ensembl transcript: ENST00000443193
  gene symbol: FCGR3A
  hgvsc: ENST00000443193.1:c.-50C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-1216C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.271+31757G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356944
  ensembl transcript: ENST00000367967
  gene symbol: FCGR3A
  hgvsc: ENST00000367967.3:c.-44-114C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000396567
  ensembl transcript: ENST00000442336
  gene symbol: FCGR3A
  hgvsc: ENST00000442336.1:c.-44-114C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000356946
  ensembl transcript: ENST00000367969
  gene symbol: FCGR3A
  hgvsc: ENST00000367969.3:c.-50C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000416607
  ensembl transcript: ENST00000436743
  gene symbol: FCGR3A
  hgvsc: ENST00000436743.1:c.-62-96C>T
  variant of: http://identifiers.org/hgnc/3619
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9611
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4984
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2800
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7229
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3339
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

1-161558278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161558278
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161558278
    reference: chr 1
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+46C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.155+46C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-12752C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+46C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.430+46C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-39810G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.225+46C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+46C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.232+46C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.314+46C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.133+46C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+6939C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.115+46C>T
  variant of: http://identifiers.org/hgnc/15626
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

1-161559302-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559302
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559302
    reference: chr 1
allele count: 49
allele frequency: 4.388793350530238e-4
allele num: 111648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7963G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-50G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-40834C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-50G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11728G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-53G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-53G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1070G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1070G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-50G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1070G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-50G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-50G>A
  variant of: http://identifiers.org/hgnc/15626
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4850
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7228
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

1-161559307-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559307
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559307
    reference: chr 1
allele count: 50
allele frequency: 4.471072163104712e-4
allele num: 111830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-45T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1075T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-48T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-45T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-45T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1075T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1075T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-40839A>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7968T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-45T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-45T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11723T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-48T>C
  variant of: http://identifiers.org/hgnc/15626
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8624
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9734
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

1-161559309-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559309
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559309
    reference: chr 1
allele count: 5
allele frequency: 4.473472309206406e-5
allele num: 111770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1077G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-43G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-43G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-46G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-40841C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1077G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7970G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-43G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-43G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-46G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1077G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11721G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-43G>A
  variant of: http://identifiers.org/hgnc/15626
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10364
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

1-161559311-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559311
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559311
    reference: chr 1
allele count: 5
allele frequency: 4.467955820852844e-5
allele num: 111908
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-44G>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-44G>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-41G>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11719G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1079G>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-41G>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1079G>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-40843C>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7972G>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-41G>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-41G>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-41G>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1079G>C
  variant of: http://identifiers.org/hgnc/3618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5607
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

1-161559311-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559311
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559311
    reference: chr 1
allele count: 1
allele frequency: 8.935911641705686e-6
allele num: 111908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-41G>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-41G>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-44G>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.62-40843C>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-44G>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11719G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-41G>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-41G>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-41G>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7972G>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1079G>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1079G>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1079G>T
  variant of: http://identifiers.org/hgnc/3618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-161559315-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559315
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559315
    reference: chr 1
allele count: 2
allele frequency: 1.784153151706542e-5
allele num: 112098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-37C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-37C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-40C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1083C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-37C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-37C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11715C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1083C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1083C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40843G>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-37C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-40C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7976C>A
  variant of: http://identifiers.org/hgnc/3618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12198
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

1-161559326-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559326
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559326
    reference: chr 1
allele count: 14
allele frequency: 1.242059689839952e-4
allele num: 112716
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40832G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-26C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-26C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11704C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-29C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-29C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7987C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1094C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1094C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-26C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1094C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-26C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-26C>G
  variant of: http://identifiers.org/hgnc/15626
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14454
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

1-161559326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559326
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559326
    reference: chr 1
allele count: 3
allele frequency: 2.661556478228468e-5
allele num: 112716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-26C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7987C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-29C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1094C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-29C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11704C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-26C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-26C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-26C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40832G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1094C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1094C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-26C>T
  variant of: http://identifiers.org/hgnc/15626
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ

1-161559327-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559327
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559327
    reference: chr 1
allele count: 84710
allele frequency: 7.391152604484774e-1
allele num: 114610
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-28A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1095A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-25A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7988A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1095A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-25A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-25A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-28A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1095A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40831T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-25A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11703A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-25A>G
  variant of: http://identifiers.org/hgnc/15626
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 5.25e1
  variant carriers: 3536
genotype depth: GenotypeDepth
  all individuals: 5249
  bin: 4.25e1
  variant carriers: 5035
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 7.5e0
  variant carriers: 362
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 7.75e1
  variant carriers: 952
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 1.25e1
  variant carriers: 1525
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 3.75e1
  variant carriers: 5216
genotype depth: GenotypeDepth
  all individuals: 5869
  bin: 2.25e1
  variant carriers: 3849
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 1.75e1
  variant carriers: 2949
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 2.75e1
  variant carriers: 4450
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 6.75e1
  variant carriers: 1541
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 8.75e1
  variant carriers: 631
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 3.25e1
  variant carriers: 4991
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 9.25e1
  variant carriers: 556
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.25e1
  variant carriers: 749
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 6.25e1
  variant carriers: 2073
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 5.75e1
  variant carriers: 2660
genotype quality: GenotypeQuality
num of homozygotes: 33763
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

1-161559328-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559328
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559328
    reference: chr 1
allele count: 1
allele frequency: 8.632447644205037e-6
allele num: 115842
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-24C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40830G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-27C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1096C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11702C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1096C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-27C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-24C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-24C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-24C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7989C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-24C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1096C>T
  variant of: http://identifiers.org/hgnc/3618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

1-161559334-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559334
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559334
    reference: chr 1
allele count: 2
allele frequency: 1.725834009284987e-5
allele num: 115886
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1102C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+7995C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-21C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315-18C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-21C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156-18C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1102C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11696C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40824G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134-18C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1102C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431-18C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226-18C>G
  variant of: http://identifiers.org/hgnc/15626
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/1-161559352-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559352
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559352
    reference: chr 1
allele count: 6
allele frequency: 5.160935161451255e-5
allele num: 116258
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11678C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.116-3C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.431C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.134C>A
  hgvsp: ENSP00000426627.1:p.Ala45Glu
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.226C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.315C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1120C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1120C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1120C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.233-3C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8013C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.156C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40806G>T
  variant of: http://identifiers.org/hgnc/3619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9760
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala45Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

1-161559360-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559360
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559360
    reference: chr 1
allele count: 1
allele frequency: 8.586934121041424e-6
allele num: 116456
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.439C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.142C>G
  hgvsp: ENSP00000426627.1:p.Pro48Ala
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.121C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8021C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40798G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1128C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.238C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.164C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.234C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11670C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.323C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1128C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1128C>G
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro48Ala
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/1-161559361-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559361
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559362
    reference: chr 1
allele count: 2
allele frequency: 1.716738197424893e-5
allele num: 116500
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1132dupA
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40796dupT
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11666dupA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.168dupA
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.242dupA
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1132dupA
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.146dupA
  hgvsp: ENSP00000426627.1:p.Ala50GlyfsTer29
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8025dupA
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.238dupA
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.327dupA
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.443dupA
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.125dupA
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1132dupA
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala50GlyfsTer29
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

1-161559361-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559361
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559361
    reference: chr 1
allele count: 14
allele frequency: 1.201716738197425e-4
allele num: 116500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.122C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.143C>T
  hgvsp: ENSP00000426627.1:p.Pro48Leu
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.440C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1129C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.324C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.235C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8022C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.239C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1129C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.165C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40797G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11669C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1129C>T
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6049
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14737
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Pro48Leu
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

1-161559363-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559363
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559363
    reference: chr 1
allele count: 1
allele frequency: 8.580892069539549e-6
allele num: 116538
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.241A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.442A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.145A>G
  hgvsp: ENSP00000426627.1:p.Lys49Glu
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1131A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8024A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.167A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1131A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.326A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40795T>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1131A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.124A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11667A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.237A>G
  variant of: http://identifiers.org/hgnc/15626
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys49Glu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

1-161559363-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559363
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559363
    reference: chr 1
allele count: 1
allele frequency: 8.580892069539549e-6
allele num: 116538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.237A>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40795T>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.124A>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.145A>T
  hgvsp: ENSP00000426627.1:p.Lys49Ter
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.442A>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1131A>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.326A>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11667A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.241A>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1131A>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1131A>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8024A>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.167A>T
  variant of: http://identifiers.org/hgnc/15626
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys49Ter
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

1-161559380-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559380
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559380
    reference: chr 1
allele count: 5
allele frequency: 4.280382152518577e-5
allele num: 116812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8041C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1148C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.459C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.254C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.343C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11650C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.184C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.141C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.258C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.162C>T
  hgvsp: ENST00000466542.2:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40778G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1148C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1148C>T
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10359
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu54Leu
num of homozygotes: 2
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

1-161559381-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559381
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559381
    reference: chr 1
allele count: 1
allele frequency: 8.555930115162819e-6
allele num: 116878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1149G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.185G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1149G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.163G>A
  hgvsp: ENSP00000426627.1:p.Glu55Lys
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.259G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.142G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.460G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.344G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.255G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40777C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11649G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1149G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8042G>A
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu55Lys
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-161559384-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559384
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559384
    reference: chr 1
allele count: 1
allele frequency: 8.552417768503155e-6
allele num: 116926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.347C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.463C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1152C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1152C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.166C>A
  hgvsp: ENSP00000426627.1:p.Pro56Thr
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1152C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.188C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.145C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40774G>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.258C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.262C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11646C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8045C>A
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro56Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

1-161559384-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559384
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559384
    reference: chr 1
allele count: 7
allele frequency: 5.986692437952209e-5
allele num: 116926
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.463C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8045C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.145C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1152C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11646C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40774G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1152C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.188C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.262C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.347C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.166C>G
  hgvsp: ENSP00000426627.1:p.Pro56Ala
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.258C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1152C>G
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15323
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro56Ala
num of homozygotes: 2
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

1-161559386-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559386
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559386
    reference: chr 1
allele count: 1
allele frequency: 8.550955141689327e-6
allele num: 116946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.264C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.260C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11644C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.190C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40772G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.168C>T
  hgvsp: ENST00000466542.2:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.147C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8047C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1154C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.465C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.349C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1154C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1154C>T
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6055
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro56Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS

1-161559387-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559387
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559387
    reference: chr 1
allele count: 20
allele frequency: 1.711068904744794e-4
allele num: 116886
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.466T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1155T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1155T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.261T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.350T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11643T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.191T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.148T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.169T>C
  hgvsp: ENSP00000426627.1:p.Ter57GlnextTer?
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1155T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.265T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40771A>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8048T>C
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15419
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10726
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6071
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10378
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4004
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ter57GlnextTer?
num of homozygotes: 1
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-161559398-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559398
    reference: chr 1
allele count: 1
allele frequency: 8.538980445734779e-6
allele num: 117110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.272C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1166C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1166C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.180C>A
  hgvsp: ENSP00000426627.1:p.Asn60Lys
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.276C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40760G>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.202C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8059C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.477C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.361C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.159C>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1166C>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11632C>A
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn60Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

1-161559398-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559398
    reference: chr 1
allele count: 1
allele frequency: 8.538980445734779e-6
allele num: 117110
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.276C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.202C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11632C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.477C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40760G>C
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.159C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1166C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1166C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.361C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.272C>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1166C>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.180C>G
  hgvsp: ENSP00000426627.1:p.Asn60Lys
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8059C>G
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn60Lys
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-161559398-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559398
    reference: chr 1
allele count: 8
allele frequency: 6.831184356587823e-5
allele num: 117110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40760G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8059C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.180C>T
  hgvsp: ENST00000466542.2:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.276C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.272C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.477C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1166C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1166C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.361C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.159C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1166C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.202C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11632C>T
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6064
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn60Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

1-161559399-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559399
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559399
    reference: chr 1
allele count: 2
allele frequency: 1.707621113027441e-5
allele num: 117122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.277G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.362G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.181G>A
  hgvsp: ENSP00000426627.1:p.Val61Met
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.160G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.273G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1167G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.203G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11631G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.478G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8060G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1167G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1167G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40759C>T
  variant of: http://identifiers.org/hgnc/3619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val61Met
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

1-161559404-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559404
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559404
    reference: chr 1
allele count: 1
allele frequency: 8.533879501621437e-6
allele num: 117180
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1172C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8065C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1172C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.278C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11626C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.165C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.186C>T
  hgvsp: ENST00000466542.2:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.282C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.208C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.483C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.367C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1172C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40754G>A
  variant of: http://identifiers.org/hgnc/3619
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu62Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

1-161559407-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559407
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559407
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 117200
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1175A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1175A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1175A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11623A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.486A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.281A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.168A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.211A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.189A>G
  hgvsp: ENST00000466542.2:c.189A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.285A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.370A>G
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8068A>G
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40751T>C
  variant of: http://identifiers.org/hgnc/3619
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln63Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/1-161559412-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559412
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559412
    reference: chr 1
allele count: 1
allele frequency: 8.529948649709128e-6
allele num: 117234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8073A>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.491A>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.194A>C
  hgvsp: ENSP00000426627.1:p.Asp65Ala
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1180A>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.286A>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.173A>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.290A>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.375A>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.216A>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11618A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1180A>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1180A>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40746T>G
  variant of: http://identifiers.org/hgnc/3619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp65Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

1-161559429-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559429
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559429
    reference: chr 1
allele count: 1
allele frequency: 8.523986498005388e-6
allele num: 117316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8090T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11601T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40729A>G
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.190T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1197T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1197T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.211T>C
  hgvsp: ENSP00000426627.1:p.Cys71Arg
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.233T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.392T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.307T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1197T>C
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.508T>C
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.303T>C
  variant of: http://identifiers.org/hgnc/15626
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys71Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

1-161559431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559431
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559431
    reference: chr 1
allele count: 1
allele frequency: 8.524131817174421e-6
allele num: 117314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.309C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.394C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.235C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1199C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11599C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.192C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1199C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1199C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.305C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40727G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.213C>T
  hgvsp: ENST00000466542.2:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.510C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8092C>T
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys71Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

1-161559432-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559432
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559432
    reference: chr 1
allele count: 1
allele frequency: 8.524131817174421e-6
allele num: 117314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.310C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40726G>A
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11598C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1200C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.214C>T
  hgvsp: ENSP00000426627.1:p.Arg72Trp
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.306C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1200C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.193C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.511C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.395C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1200C>T
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.236C>T
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8093C>T
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10839
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg72Trp
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

1-161559433-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559433
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559433
    reference: chr 1
allele count: 43
allele frequency: 3.66543917075832e-4
allele num: 117312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40725C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.512G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8094G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1201G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.311G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.194G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.396G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.307G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.237G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1201G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.215G>A
  hgvsp: ENSP00000426627.1:p.Arg72Gln
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11597G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1201G>A
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Arg72Gln
num of homozygotes: 4
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

1-161559437-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161559437
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161559437
    reference: chr 1
allele count: 19
allele frequency: 1.618895061518012e-4
allele num: 117364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000386038
  ensembl transcript: ENST00000403078
  gene symbol: FCGR2B
  hgvsc: ENST00000403078.3:c.133+1205G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000273112
  ensembl transcript: ENST00000537821
  gene symbol: RP11-25K21.6
  hgvsc: ENST00000537821.2:n.272-11593G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356939
  ensembl transcript: ENST00000367962
  gene symbol: FCGR2B
  hgvsc: ENST00000367962.4:c.133+1205G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203747
  ensembl protein: ENSP00000444971
  ensembl transcript: ENST00000540048
  gene symbol: FCGR3A
  hgvsc: ENST00000540048.1:c.61+40721C>T
  variant of: http://identifiers.org/hgnc/3619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000496692
  gene symbol: FCGR2C
  hgvsc: ENST00000496692.2:n.315G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000244682
  ensembl protein: ENSP00000426627
  ensembl transcript: ENST00000466542
  gene symbol: FCGR2C
  hgvsc: ENST00000466542.2:c.219G>A
  hgvsp: ENST00000466542.2:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000482226
  gene symbol: FCGR2C
  hgvsc: ENST00000482226.2:n.198G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000502411
  gene symbol: FCGR2C
  hgvsc: ENST00000502411.1:n.516G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473530
  gene symbol: FCGR2C
  hgvsc: ENST00000473530.2:n.400G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000404329
  ensembl transcript: ENST00000428605
  gene symbol: FCGR2B
  hgvsc: ENST00000428605.2:c.133+1205G>A
  variant of: http://identifiers.org/hgnc/3618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000473712
  gene symbol: FCGR2C
  hgvsc: ENST00000473712.2:n.241G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000244682
  ensembl transcript: ENST00000465075
  gene symbol: FCGR2C
  hgvsc: ENST00000465075.2:n.311G>A
  variant of: http://identifiers.org/hgnc/15626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000072694
  ensembl protein: ENSP00000356937
  ensembl transcript: ENST00000367960
  gene symbol: FCGR2B
  hgvsc: ENST00000367960.5:c.112+8098G>A
  variant of: http://identifiers.org/hgnc/3618
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly73Gly
num of homozygotes: 3
reference allele: G

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30747
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10003
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7344
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

FS
type: SiteQuality
SIO_000300: 3.261e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.334e1

DP
type: SiteQuality
SIO_000300: 1.999796e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

MQ
type: SiteQuality
SIO_000300: 5.15e1

VQSLOD
type: SiteQuality
SIO_000300: -1.424e0

GenotypeQuality
all individuals: 3249
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7345
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30750
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10001
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.494004796163069e-5
allele num: 66720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.999959e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.91e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.156e1

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

QD
type: SiteQuality
SIO_000300: 6.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.85e0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3778
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3248
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.42306760358614e-4
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e0

DP
type: SiteQuality
SIO_000300: 1.999796e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.118e1

VQSLOD
type: SiteQuality
SIO_000300: -1.411e0

MQ
type: SiteQuality
SIO_000300: 5.166e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.83e-1

FS
type: SiteQuality
SIO_000300: 2.46e0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2668
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7347
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 30759
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 4.806767929244376e-4
allele num: 10402
num of homozygotes: 1

South Asian
type: Population
allele count: 3
allele frequency: 1.817300702689605e-4
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQ
type: SiteQuality
SIO_000300: 5.124e1

FS
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.31e-2

DP
type: SiteQuality
SIO_000300: 2.000238e6

MQRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.66e-1

QD
type: SiteQuality
SIO_000300: 1.395e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.63e-1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30770
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3767
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2667
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3243
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994664748373947e-5
allele num: 66726
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.999873e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.171e1

MQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-3

FS
type: SiteQuality
SIO_000300: 1.182e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-2

QD
type: SiteQuality
SIO_000300: 7.96e0

GenotypeQuality
all individuals: 9990
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7330
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2667
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3770
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3243
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.362e1

MQ
type: SiteQuality
SIO_000300: 5.116e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 8.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.88e-1

DP
type: SiteQuality
SIO_000300: 1.999643e6

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30779
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2667
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7329
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3241
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8654
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Latino
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allele frequency: 0.0e0
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DP
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.039981511439797e-3
allele num: 8654
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African
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InbreedingCoeff
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FS
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ReadPosRankSum
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QD
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VQSLOD
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BaseQRankSum
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MQ
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ClippingRankSum
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 906
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
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ClippingRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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MQ
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MQRankSum
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QD
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DP
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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South Asian
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Other
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-4

ReadPosRankSum
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SIO_000300: -8.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.55e-1

FS
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SIO_000300: 6.761e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.932e0

MQRankSum
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DP
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MQ
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SIO_000300: 5.658e1

QD
type: SiteQuality
SIO_000300: 5.62e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

Other
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allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.998590662388677e-5
allele num: 66698
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10390
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Latino
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allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.221e1

BaseQRankSum
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SIO_000300: 2.47e0

QD
type: SiteQuality
SIO_000300: 9.2e-1

DP
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SIO_000300: 2.000157e6

FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.97e-1

MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
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South Asian
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Other
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num of homozygotes: 0

VQSLOD
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FS
type: SiteQuality
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QD
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BaseQRankSum
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MQ
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DP
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 2.424242424242424e-4
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European (Non-Finnish)
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allele frequency: 2.098698806739821e-4
allele num: 66708
num of homozygotes: 0

Other
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Latino
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num of homozygotes: 0

DP
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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Other
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InbreedingCoeff
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ClippingRankSum
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FS
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VQSLOD
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QD
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MQ
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 66676
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Latino
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Other
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MQRankSum
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QD
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FS
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MQ
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BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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African
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South Asian
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DP
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ReadPosRankSum
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FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.055e-1

ReadPosRankSum
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SIO_000300: 1.9e0

MQRankSum
type: SiteQuality
SIO_000300: 9.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.55e-1

DP
type: SiteQuality
SIO_000300: 1.996389e6

InbreedingCoeff
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SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.927e1

FS
type: SiteQuality
SIO_000300: 5.253e0

QD
type: SiteQuality
SIO_000300: 1.002e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499835018148004e-5
allele num: 66674
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.055e-1

MQRankSum
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SIO_000300: 9.17e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

DP
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FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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SIO_000300: -2.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.55e-1

QD
type: SiteQuality
SIO_000300: 1.002e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 42

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 40
allele frequency: 3.845414343395501e-3
allele num: 10402
num of homozygotes: 1

Latino
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allele count: 3
allele frequency: 2.593809441466367e-4
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.693e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.84e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.35e-1

DP
type: SiteQuality
SIO_000300: 1.996132e6

FS
type: SiteQuality
SIO_000300: 1.166e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.959e0

VQSLOD
type: SiteQuality
SIO_000300: 9.49e-1

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.216101179618144e-4
allele num: 16446
num of homozygotes: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.00294144130624e-5
allele num: 66634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.993886e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.08e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

FS
type: SiteQuality
SIO_000300: 8.127000000000001e0

QD
type: SiteQuality
SIO_000300: 1.453e1

MQ
type: SiteQuality
SIO_000300: 5.69e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.01e-1

FS
type: SiteQuality
SIO_000300: 1.058e0

QD
type: SiteQuality
SIO_000300: 1.378e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

MQRankSum
type: SiteQuality
SIO_000300: 6.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.989799e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

MQ
type: SiteQuality
SIO_000300: 5.652e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.352000961422906e-4
allele num: 66568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.224739742804654e-4
allele num: 16330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.506e0

FS
type: SiteQuality
SIO_000300: 6.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.975e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.445e1

DP
type: SiteQuality
SIO_000300: 1.989012e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503126503126503e-5
allele num: 66528
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.576e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 1.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 5.2174e1

DP
type: SiteQuality
SIO_000300: 1.985376e6

MQRankSum
type: SiteQuality
SIO_000300: -6.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.417e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.985344e6

ClippingRankSum
type: SiteQuality
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FS
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
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allele num: 898
num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.659508139937652e-5
allele num: 11548
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South Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66456
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
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East Asian
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allele count: 0
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African
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InbreedingCoeff
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SIO_000300: -4.0e-4

ReadPosRankSum
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DP
type: SiteQuality
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VQSLOD
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MQ
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MQRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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SIO_000300: 5.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.247e0

VQSLOD
type: SiteQuality
SIO_000300: -2.057e1

FS
type: SiteQuality
SIO_000300: 6.4214e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

DP
type: SiteQuality
SIO_000300: 1.974977e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28188
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variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66232
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.951116e6

MQ
type: SiteQuality
SIO_000300: 5.797e1

QD
type: SiteQuality
SIO_000300: 1.385e1

FS
type: SiteQuality
SIO_000300: 3.327e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e0

VQSLOD
type: SiteQuality
SIO_000300: -2.084e0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 81
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511441613010489e-5
allele num: 66162
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15650
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.66e1

VQSLOD
type: SiteQuality
SIO_000300: -7.75e-1

MQRankSum
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SIO_000300: -1.037e0

QD
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SIO_000300: 1.631e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e-1

DP
type: SiteQuality
SIO_000300: 1.939841e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15530
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.028375882014476e-5
allele num: 66042
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
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SIO_000300: 1.921426e6

QD
type: SiteQuality
SIO_000300: 1.136e1

VQSLOD
type: SiteQuality
SIO_000300: -5.447e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

MQ
type: SiteQuality
SIO_000300: 5.112e1

GenotypeQuality
all individuals: 2430
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65582
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.720062208398134e-5
allele num: 10288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.355e-1

DP
type: SiteQuality
SIO_000300: 1.796982e6

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

FS
type: SiteQuality
SIO_000300: 3.664e0

QD
type: SiteQuality
SIO_000300: 1.244e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.53e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.223e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.388503193557345e-4
allele num: 14404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.802816901408451e-5
allele num: 11360
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.669e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.501e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.34e-1

DP
type: SiteQuality
SIO_000300: 1.738846e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.445e0

VQSLOD
type: SiteQuality
SIO_000300: -1.507e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14200
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.960015680125441e-4
allele num: 10204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64852
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

FS
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-2

MQ
type: SiteQuality
SIO_000300: 5.784e1

DP
type: SiteQuality
SIO_000300: 1.722164e6

QD
type: SiteQuality
SIO_000300: 1.428e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.172572084349448e-5
allele num: 13942
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.486e0

MQRankSum
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FS
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DP
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BaseQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.479e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
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SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 9.5e1

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 2.997e1

QD
type: SiteQuality
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GenotypeDepth
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variant carriers: 5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 42

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5520
bin: 6.25e1
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East Asian
type: Population
allele count: 48
allele frequency: 5.675100496571293e-3
allele num: 8458
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.433350488934638e-5
allele num: 15544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.859e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.333e0

QD
type: SiteQuality
SIO_000300: 1.031e1

VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

InbreedingCoeff
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SIO_000300: 2.69e-2

FS
type: SiteQuality
SIO_000300: 2.243e0

MQ
type: SiteQuality
SIO_000300: 5.148e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

DP
type: SiteQuality
SIO_000300: 2.03679e6

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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European (Non-Finnish)
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African
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South Asian
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Other
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DP
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InbreedingCoeff
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VQSLOD
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MQ
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ReadPosRankSum
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MQRankSum
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FS
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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East Asian
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allele frequency: 5.900401227283455e-4
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European (Non-Finnish)
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Latino
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European (Finnish)
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Other
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DP
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BaseQRankSum
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FS
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VQSLOD
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MQ
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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FS
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ClippingRankSum
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QD
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.648206751054852e-5
allele num: 60672
num of homozygotes: 0

East Asian
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African
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Latino
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num of homozygotes: 0

European (Finnish)
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South Asian
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Other
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ClippingRankSum
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DP
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ReadPosRankSum
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VQSLOD
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MQ
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MQRankSum
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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Other
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European (Non-Finnish)
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South Asian
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allele num: 15588
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African
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DP
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VQSLOD
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MQ
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FS
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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num of homozygotes: 0

African
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South Asian
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European (Finnish)
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East Asian
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Other
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ClippingRankSum
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MQ
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FS
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QD
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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VQSLOD
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MQRankSum
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QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.85e-2

DP
type: SiteQuality
SIO_000300: 2.109527e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 5.494e1

GenotypeDepth
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variant carriers: 4320

GenotypeDepth
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variant carriers: 5079

GenotypeDepth
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variant carriers: 1215

GenotypeQuality
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variant carriers: 77

GenotypeQuality
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bin: 3.75e1
variant carriers: 764

GenotypeQuality
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bin: 1.75e1
variant carriers: 167

GenotypeQuality
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bin: 9.25e1
variant carriers: 1254

GenotypeQuality
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bin: 4.25e1
variant carriers: 464

GenotypeQuality
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variant carriers: 522

GenotypeQuality
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variant carriers: 38209

GenotypeQuality
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bin: 8.25e1
variant carriers: 1311

GenotypeQuality
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variant carriers: 644

GenotypeQuality
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variant carriers: 1021

GenotypeQuality
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bin: 7.25e1
variant carriers: 747

GenotypeQuality
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variant carriers: 1317

GenotypeQuality
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bin: 1.25e1
variant carriers: 118

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1237

GenotypeQuality
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variant carriers: 1196

GenotypeQuality
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bin: 8.75e1
variant carriers: 732

GenotypeQuality
all individuals: 776
bin: 2.25e1
variant carriers: 238

GenotypeQuality
all individuals: 1950
bin: 6.75e1
variant carriers: 1322

European (Finnish)
type: Population
allele count: 4898
allele frequency: 7.995429317662422e-1
allele num: 6126
num of homozygotes: 2044

European (Non-Finnish)
type: Population
allele count: 45406
allele frequency: 7.296949828046154e-1
allele num: 62226
num of homozygotes: 17977

Other
type: Population
allele count: 623
allele frequency: 7.295081967213115e-1
allele num: 854
num of homozygotes: 245

Latino
type: Population
allele count: 9765
allele frequency: 8.681543385490754e-1
allele num: 11248
num of homozygotes: 4362

South Asian
type: Population
allele count: 11617
allele frequency: 7.308127830900856e-1
allele num: 15896
num of homozygotes: 4557

East Asian
type: Population
allele count: 6492
allele frequency: 7.60543580131209e-1
allele num: 8536
num of homozygotes: 2510

African
type: Population
allele count: 5909
allele frequency: 6.076717400246812e-1
allele num: 9724
num of homozygotes: 2068

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e-1

FS
type: SiteQuality
SIO_000300: 6.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.712e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.475e-1

MQ
type: SiteQuality
SIO_000300: 5.585e1

QD
type: SiteQuality
SIO_000300: 2.471e1

DP
type: SiteQuality
SIO_000300: 2.863732e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 7123
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GenotypeQuality
all individuals: 1489
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.268806419257773e-5
allele num: 15952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.329e0

DP
type: SiteQuality
SIO_000300: 2.127784e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.56e-1

VQSLOD
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SIO_000300: -1.478e0

MQRankSum
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SIO_000300: 2.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.503e1

GenotypeDepth
all individuals: 185
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 2866
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.253761283851555e-4
allele num: 15952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63102
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

DP
type: SiteQuality
SIO_000300: 2.132342e6

VQSLOD
type: SiteQuality
SIO_000300: -9.058e-1

FS
type: SiteQuality
SIO_000300: 3.351e0

MQ
type: SiteQuality
SIO_000300: 5.51e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.646e0

MQRankSum
type: SiteQuality
SIO_000300: 6.62e-1

QD
type: SiteQuality
SIO_000300: 1.413e1

GenotypeDepth
all individuals: 280
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variant carriers: 0

GenotypeDepth
all individuals: 1895
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 20782
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variant carriers: 0

GenotypeQuality
all individuals: 2825
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13837
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variant carriers: 5

GenotypeQuality
all individuals: 3078
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.472986201016767e-5
allele num: 63338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15982
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.13e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.101e0

MQ
type: SiteQuality
SIO_000300: 5.584e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.512e0

GenotypeDepth
all individuals: 1899
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2819
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.00928542591845e-4
allele num: 9908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16010
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6252
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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DP
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QD
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SIO_000300: 2.813e1

FS
type: SiteQuality
SIO_000300: 8.013999999999999e0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3660
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6258
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.249063202598052e-4
allele num: 16012
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.161154e6

VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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QD
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-2

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.515e1

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
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allele count: 12
allele frequency: 1.211387038158692e-3
allele num: 9906
num of homozygotes: 1

South Asian
type: Population
allele count: 2
allele frequency: 1.249063202598052e-4
allele num: 16012
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.25e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.98e-1

MQ
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SIO_000300: 5.515e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-2

VQSLOD
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SIO_000300: 2.66e0

DP
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SIO_000300: 2.161154e6

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

FS
type: SiteQuality
SIO_000300: 1.893e0

BaseQRankSum
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SIO_000300: -1.327e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7196
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.805917576611483e-5
allele num: 11356
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63508
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16010
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6260
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e0

InbreedingCoeff
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SIO_000300: 1.8e-3

BaseQRankSum
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SIO_000300: 2.99e0

QD
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VQSLOD
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SIO_000300: -1.473e0

FS
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SIO_000300: 2.471e0

ReadPosRankSum
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SIO_000300: 9.320000000000001e-1

DP
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SIO_000300: 2.161512e6

MQ
type: SiteQuality
SIO_000300: 5.567e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.61e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7196
bin: 6.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16010
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9918
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.805917576611483e-5
allele num: 11356
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6260
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63508
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.473e0

ReadPosRankSum
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SIO_000300: 9.320000000000001e-1

MQRankSum
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SIO_000300: 2.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

FS
type: SiteQuality
SIO_000300: 2.471e0

QD
type: SiteQuality
SIO_000300: 5.36e0

DP
type: SiteQuality
SIO_000300: 2.161512e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

MQ
type: SiteQuality
SIO_000300: 5.567e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13812
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7256
bin: 6.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.000600120024005e-4
allele num: 9998
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.143270258376816e-5
allele num: 63628
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 2.172163e6

MQ
type: SiteQuality
SIO_000300: 5.036e1

QD
type: SiteQuality
SIO_000300: 1.842e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.24e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

FS
type: SiteQuality
SIO_000300: 2.335e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.85e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 2813
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63664
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

BaseQRankSum
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QD
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ClippingRankSum
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VQSLOD
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DP
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FS
type: SiteQuality
SIO_000300: 5.48e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.436e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63686
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16038
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6294
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.796622097114708e-5
allele num: 11368
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
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InbreedingCoeff
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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SIO_000300: 2.174956e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.0991426687184e-4
allele num: 63686
num of homozygotes: 2

European (Finnish)
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East Asian
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African
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Other
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Latino
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num of homozygotes: 0

South Asian
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InbreedingCoeff
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QD
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FS
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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DP
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.569957297161517e-5
allele num: 63696
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 2.45e-1

MQRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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DP
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InbreedingCoeff
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MQ
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QD
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SIO_000300: 8.81e0

FS
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SIO_000300: 9.786e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 11

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 8.109360518999073e-4
allele num: 8632
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele num: 870
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.8724254150543e-4
allele num: 16022
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European (Non-Finnish)
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allele count: 9
allele frequency: 1.413893863700632e-4
allele num: 63654
num of homozygotes: 1

DP
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MQ
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MQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: 1.855e-1

QD
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SIO_000300: 4.58e0

VQSLOD
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BaseQRankSum
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SIO_000300: 1.38e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6302
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63784
num of homozygotes: 0

South Asian
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Other
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Latino
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allele num: 11386
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East Asian
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 3.9e-3

MQRankSum
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ReadPosRankSum
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FS
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DP
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ClippingRankSum
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BaseQRankSum
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SIO_000300: -3.48e-1

QD
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.225099601593625e-5
allele num: 16064
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
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BaseQRankSum
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SIO_000300: -3.48e-1

DP
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QD
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ClippingRankSum
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VQSLOD
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FS
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MQ
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MQRankSum
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InbreedingCoeff
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SIO_000300: 3.9e-3

ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.70337388686818e-5
allele num: 63784
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 2.31696014828545e-4
allele num: 8632
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South Asian
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allele num: 16064
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African
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Latino
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allele frequency: 8.782715615668365e-5
allele num: 11386
num of homozygotes: 0

European (Finnish)
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allele frequency: 1.586797841954935e-4
allele num: 6302
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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European (Non-Finnish)
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num of homozygotes: 0

South Asian
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European (Finnish)
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Latino
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African
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East Asian
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Other
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQ
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Other
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African
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South Asian
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European (Non-Finnish)
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FS
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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ClippingRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.98e-1

MQ
type: SiteQuality
SIO_000300: 4.935e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.75e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

DP
type: SiteQuality
SIO_000300: 2.18506e6

MQRankSum
type: SiteQuality
SIO_000300: -3.464e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.904e0

VQSLOD
type: SiteQuality
SIO_000300: -4.782e0

QD
type: SiteQuality
SIO_000300: 7.1e-1

GenotypeDepth
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1640
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 541
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2805
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7361
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23423
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13796
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3125
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3648
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565974505935043e-5
allele num: 63858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.263e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.251e0

MQRankSum
type: SiteQuality
SIO_000300: -7.54e-1

MQ
type: SiteQuality
SIO_000300: 5.067e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

QD
type: SiteQuality
SIO_000300: 1.299e1

DP
type: SiteQuality
SIO_000300: 2.186141e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeDepth
all individuals: 541
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10807
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 677
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13795
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7404
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3131
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23937
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16100
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.276e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.418e0

DP
type: SiteQuality
SIO_000300: 2.19028e6

MQ
type: SiteQuality
SIO_000300: 4.705e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.632e0

GenotypeDepth
all individuals: 409
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 998
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13796
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2808
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23915
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7399
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.643e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.457e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.833e0

QD
type: SiteQuality
SIO_000300: 9.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.5e-1

DP
type: SiteQuality
SIO_000300: 2.190961e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

GenotypeDepth
all individuals: 999
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4006
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1891
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13795
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2095
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23955
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7401
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16106
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.775008775008775e-5
allele num: 11396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6314
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.947e1

QD
type: SiteQuality
SIO_000300: 1.338e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

DP
type: SiteQuality
SIO_000300: 2.191517e6

GenotypeDepth
all individuals: 281
bin: 8.25e1
variant carriers: 3

GenotypeDepth
all individuals: 185
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1659
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3652
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3124
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7399
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2811
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 164
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13797
bin: 9.75e1
variant carriers: 36

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23990
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2094
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 33
allele frequency: 2.896261190100053e-3
allele num: 11394
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.208866261020738e-4
allele num: 16106
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

DP
type: SiteQuality
SIO_000300: 2.194033e6

VQSLOD
type: SiteQuality
SIO_000300: -6.301e-1

MQ
type: SiteQuality
SIO_000300: 4.756e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

QD
type: SiteQuality
SIO_000300: 1.229e1