1-228465301-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465301
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465301
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 15150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-154C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.7975C>T
  hgvsp: ENSP00000455507.2:p.Pro2659Ser
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.232C>T
  hgvsp: ENSP00000355667.2:p.Pro78Ser
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-154C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-154C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-154C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-154C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 35088
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8878
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 113
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 7180
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33118
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro2659Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ

1-228465308-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465308
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465308
    reference: chr 1
allele count: 1
allele frequency: 6.426735218508997e-5
allele num: 15560
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.7982A>G
  hgvsp: ENSP00000455507.2:p.Gln2661Arg
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-147A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.239A>G
  hgvsp: ENSP00000355667.2:p.Gln80Arg
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-147A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-147A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-147A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-147A>G
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
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genotype quality: GenotypeQuality
  all individuals: 9391
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 431
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genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 313
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genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln2661Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-228465313-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465313
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465313
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 15806
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.7987T>A
  hgvsp: ENSP00000455507.2:p.Phe2663Ile
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-142T>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-142T>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-142T>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-142T>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-142T>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.244T>A
  hgvsp: ENSP00000355667.2:p.Phe82Ile
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 31776
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Phe2663Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

1-228465316-TGGGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465316
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465312
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 15942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-135_6755-132delAGGG
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-135_-1889-132delAGGG
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.251_254delAGGG
  hgvsp: ENSP00000355667.2:p.Glu84AlafsTer37
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-135_3296-132delAGGG
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.7994_7997delAGGG
  hgvsp: ENSP00000455507.2:p.Glu2665AlafsTer37
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-135_6755-132delAGGG
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-135_-1889-132delAGGG
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: frameshift
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14482
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32710
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu2665AlafsTer37
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: TGGGA
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

1-228465323-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465323
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465323
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 16716
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-132G>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.7997G>C
  hgvsp: ENSP00000455507.2:p.Gly2666Ala
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-132G>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-132G>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-132G>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-132G>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.254G>C
  hgvsp: ENSP00000355667.2:p.Gly85Ala
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17508
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28784
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14088
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly2666Ala
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

1-228465334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465334
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465334
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 18344
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8008C>T
  hgvsp: ENSP00000455507.2:p.Arg2670Trp
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-121C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-121C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-121C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-121C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.265C>T
  hgvsp: ENSP00000355667.2:p.Arg89Trp
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-121C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25006
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23589
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4528
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg2670Trp
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD

1-228465334-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465334
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465333
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 18344
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8010delG
  hgvsp: ENSP00000455507.2:p.Thr2672LeufsTer31
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.267delG
  hgvsp: ENSP00000355667.2:p.Thr91LeufsTer31
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-119delG
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-119delG
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-119delG
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-119delG
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-119delG
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: frameshift
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25006
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23589
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24083
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr2672LeufsTer31
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: CG
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

1-228465336-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465336
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465336
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 19278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-119G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-119G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-119G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.267G>A
  hgvsp: ENST00000366706.2:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-119G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8010G>A
  hgvsp: ENST00000570156.2:c.8010G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-119G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25250
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23282
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22066
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg2670Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-228465339-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465339
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465339
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 20394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-116C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8013C>A
  hgvsp: ENST00000570156.2:c.8013C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.270C>A
  hgvsp: ENST00000366706.2:c.270C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-116C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-116C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-116C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-116C>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21053
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27285
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20426
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro2671Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-228465341-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465341
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465341
    reference: chr 1
allele count: 1
allele frequency: 4.754207473614148e-5
allele num: 21034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-114C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-114C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.272C>T
  hgvsp: ENSP00000355667.2:p.Thr91Ile
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8015C>T
  hgvsp: ENSP00000455507.2:p.Thr2672Ile
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-114C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-114C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-114C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19761
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4840
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2108
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr2672Ile
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

1-228465343-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465343
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465343
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 21782
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8017G>T
  hgvsp: ENSP00000455507.2:p.Asp2673Tyr
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.274G>T
  hgvsp: ENSP00000355667.2:p.Asp92Tyr
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-112G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-112G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-112G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-112G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-112G>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 18275
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29673
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17797
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp2673Tyr
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

1-228465345-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465345
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465345
    reference: chr 1
allele count: 6
allele frequency: 2.652754443363693e-4
allele num: 22618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-110C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-110C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8019C>T
  hgvsp: ENST00000570156.2:c.8019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-110C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-110C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-110C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.276C>T
  hgvsp: ENST00000366706.2:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17024
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30546
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5058
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp2673Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

1-228465346-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465346
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465346
    reference: chr 1
allele count: 19424
allele frequency: 4.609178491765934e-1
allele num: 42142
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-109A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-109A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-109A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.277A>G
  hgvsp: ENSP00000355667.2:p.Asn93Asp
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8020A>G
  hgvsp: ENSP00000455507.2:p.Asn2674Asp
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-109A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-109A>G
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10290
  bin: 2.5e0
  variant carriers: 1878
genotype depth: GenotypeDepth
  all individuals: 10330
  bin: 1.25e1
  variant carriers: 8658
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.25e1
  variant carriers: 274
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.25e1
  variant carriers: 369
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 2.25e1
  variant carriers: 841
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 222
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 6.25e1
  variant carriers: 306
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.75e1
  variant carriers: 386
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.75e1
  variant carriers: 311
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.75e1
  variant carriers: 414
genotype depth: GenotypeDepth
  all individuals: 26129
  bin: 7.5e0
  variant carriers: 11579
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 1.75e1
  variant carriers: 2870
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 2.75e1
  variant carriers: 349
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.25e1
  variant carriers: 402
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 227
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 7.75e1
  variant carriers: 690
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 2.75e1
  variant carriers: 1048
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 842
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 6.75e1
  variant carriers: 336
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 5.25e1
  variant carriers: 861
genotype quality: GenotypeQuality
  all individuals: 4895
  bin: 2.5e0
  variant carriers: 163
genotype quality: GenotypeQuality
  all individuals: 1170
  bin: 1.25e1
  variant carriers: 741
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 4.75e1
  variant carriers: 782
genotype quality: GenotypeQuality
  all individuals: 7578
  bin: 7.5e0
  variant carriers: 717
genotype quality: GenotypeQuality
  all individuals: 12813
  bin: 2.25e1
  variant carriers: 1798
hgvs: p.Asn2674Asp
num of homozygotes: 3547
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-228465348-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465348
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465348
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 43578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-107C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.279C>A
  hgvsp: ENSP00000355667.2:p.Asn93Lys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-107C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8022C>A
  hgvsp: ENSP00000455507.2:p.Asn2674Lys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-107C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-107C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-107C>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26554
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10917
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3462
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4535
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2439
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9508
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5691
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn2674Lys
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

1-228465348-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465348
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465348
    reference: chr 1
allele count: 6
allele frequency: 1.37684152554041e-4
allele num: 43578
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8022C>T
  hgvsp: ENST00000570156.2:c.8022C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.279C>T
  hgvsp: ENST00000366706.2:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-107C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-107C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-107C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-107C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-107C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10281
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10917
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26554
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2684
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5691
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4535
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2439
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9508
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19039
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn2674Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-228465349-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465349
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465349
    reference: chr 1
allele count: 1
allele frequency: 2.272830583208328e-5
allele num: 43998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-106G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-106G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-106G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.280G>A
  hgvsp: ENSP00000355667.2:p.Val94Met
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8023G>A
  hgvsp: ENSP00000455507.2:p.Val2675Met
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-106G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-106G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10356
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26881
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2618
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4392
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3519
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val2675Met
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-228465352-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465352
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465352
    reference: chr 1
allele count: 61
allele frequency: 1.368879314213904e-3
allele num: 44562
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8026C>T
  hgvsp: ENSP00000455507.2:p.Arg2676Cys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-103C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-103C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.283C>T
  hgvsp: ENSP00000355667.2:p.Arg95Cys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-103C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-103C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-103C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10518
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27330
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3529
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8585
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Arg2676Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

1-228465353-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465353
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465353
    reference: chr 1
allele count: 1
allele frequency: 2.212291491526924e-5
allele num: 45202
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8027G>A
  hgvsp: ENSP00000455507.2:p.Arg2676His
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-102G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-102G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.284G>A
  hgvsp: ENSP00000355667.2:p.Arg95His
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-102G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-102G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-102G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10657
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27636
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1080
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4342
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3009
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3595
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg2676His
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-228465355-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465355
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465355
    reference: chr 1
allele count: 4
allele frequency: 8.592541673827119e-5
allele num: 46552
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8029A>G
  hgvsp: ENSP00000455507.2:p.Ile2677Val
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-100A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-100A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-100A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-100A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.286A>G
  hgvsp: ENSP00000355667.2:p.Ile96Val
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-100A>G
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28167
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10677
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2743
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2386
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24344
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3644
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile2677Val
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-228465358-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465358
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465358
    reference: chr 1
allele count: 2
allele frequency: 4.229760595550292e-5
allele num: 47284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-97C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-97C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.289C>T
  hgvsp: ENSP00000355667.2:p.Arg97Cys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-97C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-97C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8032C>T
  hgvsp: ENSP00000455507.2:p.Arg2678Cys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-97C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7526
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28431
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10786
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5382
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6896
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg2678Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum

1-228465359-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465359
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465359
    reference: chr 1
allele count: 3
allele frequency: 6.228718544971348e-5
allele num: 48164
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-96G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-96G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-96G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.290G>A
  hgvsp: ENSP00000355667.2:p.Arg97His
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-96G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8033G>A
  hgvsp: ENSP00000455507.2:p.Arg2678His
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-96G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10767
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6448
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25523
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg2678His
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

1-228465361-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465361
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465361
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 49404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-94C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-94C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.292C>G
  hgvsp: ENSP00000355667.2:p.Gln98Glu
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-94C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-94C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8035C>G
  hgvsp: ENSP00000455507.2:p.Gln2679Glu
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-94C>G
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10659
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28943
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26053
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2461
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6375
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genotype quality: GenotypeQuality
  all individuals: 3734
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln2679Glu
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

1-228465361-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465361
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465361
    reference: chr 1
allele count: 1
allele frequency: 2.024127601003967e-5
allele num: 49404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-94C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8035C>T
  hgvsp: ENSP00000455507.2:p.Gln2679Ter
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.292C>T
  hgvsp: ENSP00000355667.2:p.Gln98Ter
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-94C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-94C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-94C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-94C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28943
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10659
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6829
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26053
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1327
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6375
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5806
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4724
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln2679Ter
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

1-228465363-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465363
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465363
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 50610
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8037G>A
  hgvsp: ENST00000570156.2:c.8037G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-92G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-92G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.294G>A
  hgvsp: ENST00000366706.2:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-92G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-92G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-92G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28968
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4635
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26550
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Gln2679Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-228465363-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465363
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465363
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 50610
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-92G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-92G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8037G>T
  hgvsp: ENSP00000455507.2:p.Gln2679His
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-92G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.294G>T
  hgvsp: ENSP00000355667.2:p.Gln98His
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-92G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-92G>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28968
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3721
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5314
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26550
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln2679His
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-228465366-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465366
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465366
    reference: chr 1
allele count: 4
allele frequency: 7.650816724685361e-5
allele num: 52282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-89A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-89A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-89A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8040A>G
  hgvsp: ENST00000570156.2:c.8040A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-89A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.297A>G
  hgvsp: ENST00000366706.2:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-89A>G
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28936
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10187
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8176
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4500
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26775
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 5.25e1
  variant carriers: 1
hgvs: c.8040A>G
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP

1-228465370-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465370
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465370
    reference: chr 1
allele count: 64239
allele frequency: 7.209117026529605e-1
allele num: 89108
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-85T>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+3T>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+3T>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-85T>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-85T>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-85T>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-85T>G
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12040
  bin: 1.75e1
  variant carriers: 11759
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.25e1
  variant carriers: 872
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 776
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 2.5e0
  variant carriers: 911
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 2.25e1
  variant carriers: 6040
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 296
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 3.75e1
  variant carriers: 1095
genotype depth: GenotypeDepth
  all individuals: 16026
  bin: 1.25e1
  variant carriers: 15180
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 627
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 3.25e1
  variant carriers: 1488
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.75e1
  variant carriers: 432
genotype depth: GenotypeDepth
  all individuals: 12270
  bin: 7.5e0
  variant carriers: 8486
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 2.75e1
  variant carriers: 2802
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 9.75e1
  variant carriers: 497
genotype quality: GenotypeQuality
  all individuals: 1505
  bin: 6.75e1
  variant carriers: 1288
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 1.25e1
  variant carriers: 717
genotype quality: GenotypeQuality
  all individuals: 5304
  bin: 2.25e1
  variant carriers: 2415
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 7.5e0
  variant carriers: 604
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 7.25e1
  variant carriers: 701
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 8.75e1
  variant carriers: 671
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 3.75e1
  variant carriers: 3317
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 2.5e0
  variant carriers: 228
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 4.25e1
  variant carriers: 1818
genotype quality: GenotypeQuality
  all individuals: 22557
  bin: 9.75e1
  variant carriers: 22549
hgvs: c.8041+3T>G
num of homozygotes: 22293
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

1-228465371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465371
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465371
    reference: chr 1
allele count: 1
allele frequency: 1.112545058074852e-5
allele num: 89884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-84C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+4C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+4C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-84C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-84C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-84C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-84C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11716
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4423
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2634
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2902
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2472
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6924
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6616
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11996
  bin: 2.25e1
  variant carriers: 0
hgvs: c.8041+4C>T
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

1-228465372-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465372
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465372
    reference: chr 1
allele count: 1
allele frequency: 1.10093359168575e-5
allele num: 90832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-83G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+5G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+5G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-83G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-83G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-83G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-83G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11203
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11947
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13037
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5292
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4453
  bin: 2.75e1
  variant carriers: 0
hgvs: c.8041+5G>A
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

1-228465374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465374
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465374
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 87674
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-81G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+7G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+7G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-81G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-81G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-81G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-81G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12084
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12367
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3362
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3833
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 7.75e1
  variant carriers: 0
hgvs: c.8041+7G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP

1-228465382-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465382
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465382
    reference: chr 1
allele count: 3
allele frequency: 3.400820731403178e-5
allele num: 88214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-73G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-73G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-73G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-73G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+15G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-73G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+15G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15319
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8325
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 6154
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4184
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 4796
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff

1-228465382-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465382
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465382
    reference: chr 1
allele count: 2
allele frequency: 2.267213820935452e-5
allele num: 88214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+15G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-73G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-73G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-73G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-73G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-73G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+15G>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10808
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15319
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5677
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genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 153
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genotype depth: GenotypeDepth
  all individuals: 50
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genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8325
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 11208
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 4184
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genotype quality: GenotypeQuality
  all individuals: 6154
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 3706
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genotype quality: GenotypeQuality
  all individuals: 1010
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genotype quality: GenotypeQuality
  all individuals: 1175
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genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

1-228465383-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465383
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465383
    reference: chr 1
allele count: 2
allele frequency: 2.254029076975093e-5
allele num: 88730
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-72G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-72G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+16G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-72G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-72G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+16G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-72G>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
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genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7903
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12159
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 15223
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
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genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 50
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genotype depth: GenotypeDepth
  all individuals: 99
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genotype quality: GenotypeQuality
  all individuals: 330
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3026
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 12128
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 479
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3673
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD

1-228465384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465384
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465384
    reference: chr 1
allele count: 1
allele frequency: 1.121956692471671e-5
allele num: 89130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-71C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-71C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+17C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-71C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+17C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-71C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-71C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11871
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2482
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 169
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genotype depth: GenotypeDepth
  all individuals: 153
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 13404
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 335
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genotype quality: GenotypeQuality
  all individuals: 510
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
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genotype quality: GenotypeQuality
  all individuals: 962
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 1903
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genotype quality: GenotypeQuality
  all individuals: 13061
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

1-228465390-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465390
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465390
    reference: chr 1
allele count: 1
allele frequency: 1.099964801126364e-5
allele num: 90912
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-65C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+23C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-65C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-65C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-65C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+23C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-65C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3596
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1124
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5366
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

1-228465393-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465393
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465393
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 92140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+26G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-62G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-62G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-62G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+26G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-62G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-62G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 11898
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3716
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3819
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-228465394-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465394
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465394
    reference: chr 1
allele count: 1
allele frequency: 1.083705405522563e-5
allele num: 92276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-61C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-61C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-61C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+27C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-61C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-61C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+27C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11748
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3722
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14015
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3095
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD

1-228465396-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465396
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465396
    reference: chr 1
allele count: 8
allele frequency: 8.566778034781119e-5
allele num: 93384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-59C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-59C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-59C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-59C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+29C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+29C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-59C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3071
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11399
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19007
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11584
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3987
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13826
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2687
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3576
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20188
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

1-228465397-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465397
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465397
    reference: chr 1
allele count: 15
allele frequency: 1.582278481012658e-4
allele num: 94800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-58G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+30G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-58G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+30G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-58G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-58G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-58G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7362
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11033
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21099
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10459
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4342
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1524
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

1-228465400-C-CCGGCCCCCAGGTCTTCCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465400
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465418
    reference: chr 1
allele count: 1
allele frequency: 1.031119176754449e-5
allele num: 96982
alternate allele: CCGGCCCCCAGGTCTTCCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22192
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1183
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22809
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

1-228465401-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465401
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465401
    reference: chr 1
allele count: 4
allele frequency: 4.100461301896463e-5
allele num: 97550
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+34C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+34C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-54C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-54C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-54C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-54C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-54C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22718
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10073
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8405
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

1-228465401-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465401
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465401
    reference: chr 1
allele count: 1
allele frequency: 1.025115325474116e-5
allele num: 97550
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-54C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+34C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-54C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-54C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-54C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+34C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-54C>G
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10073
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8405
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23842
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12296
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

1-228465402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465402
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465402
    reference: chr 1
allele count: 16
allele frequency: 1.626379881680864e-4
allele num: 98378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-53G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-53G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+35G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-53G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+35G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-53G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-53G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8485
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8717
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2816
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3110
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-228465403-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465403
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465403
    reference: chr 1
allele count: 9205
allele frequency: 9.036203714611066e-2
allele num: 101868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-52G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-52G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+36G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+36G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-52G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-52G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-52G>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 7933
  bin: 7.5e0
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 3.75e1
  variant carriers: 603
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.25e1
  variant carriers: 478
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 2.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 3.25e1
  variant carriers: 922
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 1.75e1
  variant carriers: 1471
genotype depth: GenotypeDepth
  all individuals: 9620
  bin: 2.75e1
  variant carriers: 1423
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.75e1
  variant carriers: 277
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 7412
  bin: 1.25e1
  variant carriers: 738
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 22324
  bin: 2.25e1
  variant carriers: 1790
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.75e1
  variant carriers: 126
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 7.75e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 22705
  bin: 6.25e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 4.75e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 2302
  bin: 2.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 5.25e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 7.5e0
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 7.25e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 8.75e1
  variant carriers: 65
num of homozygotes: 788
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

1-228465404-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465404
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465404
    reference: chr 1
allele count: 1
allele frequency: 9.70817233947537e-6
allele num: 103006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-51C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-51C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+37C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-51C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+37C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-51C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-51C>G
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 22938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7037
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5601
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2373
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-228465404-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465404
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465404
    reference: chr 1
allele count: 1
allele frequency: 9.70817233947537e-6
allele num: 103006
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-51C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-51C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-51C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-51C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-51C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+37C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+37C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7037
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25473
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-228465407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465407
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465407
    reference: chr 1
allele count: 1
allele frequency: 9.474003334849174e-6
allele num: 105552
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+40C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-48C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-48C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+40C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-48C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-48C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-48C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25258
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8247
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

1-228465411-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465411
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465411
    reference: chr 1
allele count: 3
allele frequency: 2.770543580650524e-5
allele num: 108282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-44G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-44G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-44G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-44G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-44G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.298+44G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8041+44G>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11885
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31005
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6810
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6657
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-228465413-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465413
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465413
    reference: chr 1
allele count: 1
allele frequency: 9.122922254456548e-6
allele num: 109614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-42C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-42C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-42C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-42C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-42C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-42C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-42C>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5874
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1489
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7133
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

1-228465420-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465420
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465420
    reference: chr 1
allele count: 1
allele frequency: 8.876107294384975e-6
allele num: 112662
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-35T>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-35T>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-35T>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-35T>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-35T>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-35T>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-35T>C
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35269
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4091
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

1-228465422-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465422
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465422
    reference: chr 1
allele count: 1
allele frequency: 8.813678829543451e-6
allele num: 113460
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-33C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-33C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-33C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-33C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-33C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-33C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-33C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35486
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2287
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-228465423-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465423
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465423
    reference: chr 1
allele count: 1
allele frequency: 8.766393155200224e-6
allele num: 114072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-32C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-32C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-32C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-32C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-32C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-32C>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-32C>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7583
  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2311
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ

1-228465423-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465423
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465423
    reference: chr 1
allele count: 1
allele frequency: 8.766393155200224e-6
allele num: 114072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-32C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-32C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-32C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-32C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-32C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-32C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-32C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14433
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 165
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36322
  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 97
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

1-228465425-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465425
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465425
    reference: chr 1
allele count: 1
allele frequency: 8.71049789205951e-6
allele num: 114804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-30C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-30C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-30C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-30C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-30C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-30C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-30C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2573
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30751
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37141
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

1-228465426-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465426
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465426
    reference: chr 1
allele count: 205
allele frequency: 1.782050836259954e-3
allele num: 115036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-29C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-29C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-29C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-29C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-29C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-29C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-29C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30602
  bin: 2.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 14942
  bin: 2.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 3.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 3.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.75e1
  variant carriers: 1
num of homozygotes: 1
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-228465427-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465427
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465427
    reference: chr 1
allele count: 119
allele frequency: 1.028931122140177e-3
allele num: 115654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-28G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-28G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-28G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-28G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-28G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-28G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-28G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5963
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15300
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30814
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2476
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-228465438-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465438
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465438
    reference: chr 1
allele count: 3
allele frequency: 2.541339116291678e-5
allele num: 118048
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-17G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-17G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-17G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-17G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-17G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-17G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-17G>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16211
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32199
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
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genotype quality: GenotypeQuality
  all individuals: 1247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40616
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-228465440-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465440
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465440
    reference: chr 1
allele count: 17
allele frequency: 1.437729402412002e-4
allele num: 118242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-15C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-15C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-15C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-15C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-15C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-15C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-15C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32164
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16357
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8297
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2540
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2402
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ

1-228465441-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465441
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465441
    reference: chr 1
allele count: 3
allele frequency: 2.533013610726468e-5
allele num: 118436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-14G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-14G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-14G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-14G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-14G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-14G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-14G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6387
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8318
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-228465441-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465441
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465441
    reference: chr 1
allele count: 1
allele frequency: 8.443378702421561e-6
allele num: 118436
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-14G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-14G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-14G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-14G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-14G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-14G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-14G>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

1-228465451-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465451
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465451
    reference: chr 1
allele count: 7
allele frequency: 5.880277549100318e-5
allele num: 119042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-4C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-4C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-4C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-4C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-4C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-4C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-4C>T
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32421
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8413
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
hgvs: c.8042-4C>T
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

1-228465454-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465454
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465454
    reference: chr 1
allele count: 1
allele frequency: 8.389543273264204e-6
allele num: 119196
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299-1G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889-1G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042-1G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889-1G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755-1G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296-1G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755-1G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2559
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 8.25e1
  variant carriers: 0
hgvs: c.8042-1G>A
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

1-228465455-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465455
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465455
    reference: chr 1
allele count: 1
allele frequency: 8.386728840283135e-6
allele num: 119236
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.299G>C
  hgvsp: ENSP00000355667.2:p.Gly100Ala
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1889G>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1889G>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6755G>C
  hgvsp: ENSP00000284548.11:p.Gly2252Ala
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8042G>C
  hgvsp: ENSP00000455507.2:p.Gly2681Ala
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3296G>C
  hgvsp: ENSP00000352613.6:p.Gly1099Ala
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6755G>C
  hgvsp: ENSP00000409493.1:p.Gly2252Ala
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32479
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly2681Ala
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

1-228465459-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465459
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465459
    reference: chr 1
allele count: 1
allele frequency: 8.376752835530836e-6
allele num: 119378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6759G>T
  hgvsp: ENSP00000284548.11:p.Arg2253Ser
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1885G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1885G>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8046G>T
  hgvsp: ENSP00000455507.2:p.Arg2682Ser
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3300G>T
  hgvsp: ENSP00000352613.6:p.Arg1100Ser
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6759G>T
  hgvsp: ENSP00000409493.1:p.Arg2253Ser
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.303G>T
  hgvsp: ENSP00000355667.2:p.Arg101Ser
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41880
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2417
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg2682Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

1-228465461-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465461
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465461
    reference: chr 1
allele count: 1
allele frequency: 8.373105584861425e-6
allele num: 119430
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3302C>G
  hgvsp: ENSP00000352613.6:p.Thr1101Arg
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.305C>G
  hgvsp: ENSP00000355667.2:p.Thr102Arg
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6761C>G
  hgvsp: ENSP00000284548.11:p.Thr2254Arg
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1883C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6761C>G
  hgvsp: ENSP00000409493.1:p.Thr2254Arg
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1883C>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8048C>G
  hgvsp: ENSP00000455507.2:p.Thr2683Arg
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8444
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr2683Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

1-228465466-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465466
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465466
    reference: chr 1
allele count: 1
allele frequency: 8.365680631776201e-6
allele num: 119536
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6766A>G
  hgvsp: ENSP00000409493.1:p.Thr2256Ala
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6766A>G
  hgvsp: ENSP00000284548.11:p.Thr2256Ala
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.310A>G
  hgvsp: ENSP00000355667.2:p.Thr104Ala
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8053A>G
  hgvsp: ENSP00000455507.2:p.Thr2685Ala
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1878A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3307A>G
  hgvsp: ENSP00000352613.6:p.Thr1103Ala
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1878A>G
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8453
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41962
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr2685Ala
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS

1-228465469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465469
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465469
    reference: chr 1
allele count: 1
allele frequency: 8.362182864214875e-6
allele num: 119586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1875C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.313C>T
  hgvsp: ENSP00000355667.2:p.Leu105Phe
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8056C>T
  hgvsp: ENSP00000455507.2:p.Leu2686Phe
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3310C>T
  hgvsp: ENSP00000352613.6:p.Leu1104Phe
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1875C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6769C>T
  hgvsp: ENSP00000409493.1:p.Leu2257Phe
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6769C>T
  hgvsp: ENSP00000284548.11:p.Leu2257Phe
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16929
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu2686Phe
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP

1-228465471-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465471
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465471
    reference: chr 1
allele count: 1
allele frequency: 8.360924383799873e-6
allele num: 119604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.315C>T
  hgvsp: ENST00000366706.2:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8058C>T
  hgvsp: ENST00000570156.2:c.8058C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1873C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3312C>T
  hgvsp: ENST00000359599.6:c.3312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6771C>T
  hgvsp: ENST00000422127.1:c.6771C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1873C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6771C>T
  hgvsp: ENST00000284548.11:c.6771C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2567
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42000
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu2686Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ

1-228465476-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465476
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465476
    reference: chr 1
allele count: 10
allele frequency: 8.357709987463435e-5
allele num: 119650
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.320A>G
  hgvsp: ENSP00000355667.2:p.Tyr107Cys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6776A>G
  hgvsp: ENSP00000284548.11:p.Tyr2259Cys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1868A>G
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3317A>G
  hgvsp: ENSP00000352613.6:p.Tyr1106Cys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6776A>G
  hgvsp: ENSP00000409493.1:p.Tyr2259Cys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8063A>G
  hgvsp: ENSP00000455507.2:p.Tyr2688Cys
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1868A>G
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42055
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr2688Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-228465479-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465479
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465479
    reference: chr 1
allele count: 3
allele frequency: 2.506558828935715e-5
allele num: 119686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3320G>A
  hgvsp: ENSP00000352613.6:p.Arg1107Gln
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8066G>A
  hgvsp: ENSP00000455507.2:p.Arg2689Gln
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1865G>A
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6779G>A
  hgvsp: ENSP00000284548.11:p.Arg2260Gln
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.323G>A
  hgvsp: ENSP00000355667.2:p.Arg108Gln
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6779G>A
  hgvsp: ENSP00000409493.1:p.Arg2260Gln
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1865G>A
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42051
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg2689Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

1-228465479-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465479
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465479
    reference: chr 1
allele count: 1
allele frequency: 8.355196096452384e-6
allele num: 119686
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.323G>C
  hgvsp: ENSP00000355667.2:p.Arg108Pro
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1865G>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1865G>C
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3320G>C
  hgvsp: ENSP00000352613.6:p.Arg1107Pro
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6779G>C
  hgvsp: ENSP00000284548.11:p.Arg2260Pro
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8066G>C
  hgvsp: ENSP00000455507.2:p.Arg2689Pro
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6779G>C
  hgvsp: ENSP00000409493.1:p.Arg2260Pro
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2566
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8457
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg2689Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

1-228465491-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 228465491
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 228465491
    reference: chr 1
allele count: 17
allele frequency: 1.419434564066597e-4
allele num: 119766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355670
  ensembl transcript: ENST00000366709
  gene symbol: OBSCN
  hgvsc: ENST00000366709.4:c.-1853C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000284548
  ensembl transcript: ENST00000284548
  gene symbol: OBSCN
  hgvsc: ENST00000284548.11:c.6791C>T
  hgvsp: ENSP00000284548.11:p.Ala2264Val
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355667
  ensembl transcript: ENST00000366706
  gene symbol: OBSCN
  hgvsc: ENST00000366706.2:c.335C>T
  hgvsp: ENSP00000355667.2:p.Ala112Val
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000355668
  ensembl transcript: ENST00000366707
  gene symbol: OBSCN
  hgvsc: ENST00000366707.4:c.-1853C>T
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000409493
  ensembl transcript: ENST00000422127
  gene symbol: OBSCN
  hgvsc: ENST00000422127.1:c.6791C>T
  hgvsp: ENSP00000409493.1:p.Ala2264Val
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000455507
  ensembl transcript: ENST00000570156
  gene symbol: OBSCN
  hgvsc: ENST00000570156.2:c.8078C>T
  hgvsp: ENSP00000455507.2:p.Ala2693Val
  variant of: http://identifiers.org/hgnc/15719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154358
  ensembl protein: ENSP00000352613
  ensembl transcript: ENST00000359599
  gene symbol: OBSCN
  hgvsc: ENST00000359599.6:c.3332C>T
  hgvsp: ENSP00000352613.6:p.Ala1111Val
  variant of: http://identifiers.org/hgnc/15719
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala2693Val
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 4251
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 209
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.67e-2

QD
type: SiteQuality
SIO_000300: 9.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.38e0

DP
type: SiteQuality
SIO_000300: 3.22653e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.145e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1376
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32535
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4295
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.270648030495553e-4
allele num: 7870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.333e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.149999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.16e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 3.42293e5

FS
type: SiteQuality
SIO_000300: 1.189e0

QD
type: SiteQuality
SIO_000300: 9.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
all individuals: 1533
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10872
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 209
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.88e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 3.5532e5

VQSLOD
type: SiteQuality
SIO_000300: 3.89e-1

MQ
type: SiteQuality
SIO_000300: 5.616e1

QD
type: SiteQuality
SIO_000300: 1.373e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5800
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1104
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -6.59e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 4.036e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7954
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.09e-2

FS
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BaseQRankSum
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SIO_000300: -1.231e0

VQSLOD
type: SiteQuality
SIO_000300: -2.241e0

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

DP
type: SiteQuality
SIO_000300: 3.87761e5

MQ
type: SiteQuality
SIO_000300: 5.881e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8088
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 7348
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1336
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.33e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7348
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 8088
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1336
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

DP
type: SiteQuality
SIO_000300: 4.37431e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.97e-2

QD
type: SiteQuality
SIO_000300: 6.33e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 4.52002e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.67e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 457
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variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8270
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: -9.239000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.19e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 4.72106e5

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1524
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.096731739416539e-4
allele num: 9118
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.83471e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.393e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.94e-2

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 912
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.663e0

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 514
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.97199763360284e-4
allele num: 10142
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.081632653061225e-3
allele num: 980
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-2

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.55e1

DP
type: SiteQuality
SIO_000300: 5.08838e5

GenotypeQuality
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bin: 1.75e1
variant carriers: 1541

GenotypeQuality
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variant carriers: 901

GenotypeQuality
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variant carriers: 13401

GenotypeQuality
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variant carriers: 675

GenotypeQuality
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variant carriers: 486

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 859

GenotypeQuality
all individuals: 1213
bin: 8.75e1
variant carriers: 1153

European (Non-Finnish)
type: Population
allele count: 11745
allele frequency: 5.113636363636364e-1
allele num: 22968
num of homozygotes: 2198

Latino
type: Population
allele count: 1317
allele frequency: 5.538267451640033e-1
allele num: 2378
num of homozygotes: 260

European (Finnish)
type: Population
allele count: 911
allele frequency: 5.455089820359281e-1
allele num: 1670
num of homozygotes: 179

African
type: Population
allele count: 1479
allele frequency: 4.827023498694517e-1
allele num: 3064
num of homozygotes: 287

Other
type: Population
allele count: 161
allele frequency: 4.653179190751445e-1
allele num: 346
num of homozygotes: 32

South Asian
type: Population
allele count: 2609
allele frequency: 2.767288926601612e-1
allele num: 9428
num of homozygotes: 349

East Asian
type: Population
allele count: 1202
allele frequency: 5.253496503496503e-1
allele num: 2288
num of homozygotes: 242

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.15708e5

VQSLOD
type: SiteQuality
SIO_000300: 4.87e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.34e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

GenotypeQuality
all individuals: 2684
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2712
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19039
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 684
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

FS
type: SiteQuality
SIO_000300: 2.401e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

VQSLOD
type: SiteQuality
SIO_000300: 3.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 6.95078e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.897e1

GenotypeQuality
all individuals: 907
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 2.5e0
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2712
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 345
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3462
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2574
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 9.511731135066582e-4
allele num: 3154
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.062022090059473e-4
allele num: 9416
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.343066911396629e-5
allele num: 23972
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.897e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 2.401e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.95078e5

GenotypeQuality
all individuals: 926
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3660
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4557
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.124391652231296e-5
allele num: 24246
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.064e0

DP
type: SiteQuality
SIO_000300: 7.01929e5

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

QD
type: SiteQuality
SIO_000300: 1.47e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

GenotypeQuality
all individuals: 4003
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 4589
bin: 3.25e1
variant carriers: 2

GenotypeQuality
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bin: 4.75e1
variant carriers: 2

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 2459
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2490
bin: 9.75e1
variant carriers: 63

GenotypeQuality
all individuals: 420
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 7.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2616
num of homozygotes: 0

South Asian
type: Population
allele count: 60
allele frequency: 6.313131313131313e-3
allele num: 9504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.062398440038999e-5
allele num: 24616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1834
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.315e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.77e0

DP
type: SiteQuality
SIO_000300: 7.14623e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

GenotypeQuality
all individuals: 2724
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2253
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 8103
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variant carriers: 0

GenotypeQuality
all individuals: 4647
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2456
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 346
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.99616368286445e-5
allele num: 25024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.76e-2

DP
type: SiteQuality
SIO_000300: 7.2426e5

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 7.803e0

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

QD
type: SiteQuality
SIO_000300: 1.587e1

GenotypeQuality
all individuals: 4994
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7471
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
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variant carriers: 0

GenotypeQuality
all individuals: 105
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GenotypeQuality
all individuals: 211
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4733
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
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variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.548467017652524e-4
allele num: 25832
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.951e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.58e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

DP
type: SiteQuality
SIO_000300: 7.37139e5

QD
type: SiteQuality
SIO_000300: 1.511e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

GenotypeQuality
all individuals: 2459
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3670
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24936
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
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variant carriers: 0

GenotypeQuality
all individuals: 271
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variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4728
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2020
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.80343830823064e-5
allele num: 26292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2814
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.022285831118381e-4
allele num: 9782
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3420
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

FS
type: SiteQuality
SIO_000300: 1.873e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.56e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 7.50955e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.398e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

GenotypeQuality
all individuals: 395
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5838
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4754
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 271
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3712
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.11765144177036e-4
allele num: 26842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2858
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

QD
type: SiteQuality
SIO_000300: 1.279e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: 7.43e-1

DP
type: SiteQuality
SIO_000300: 7.61311e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.55e-2

GenotypeQuality
all individuals: 5806
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4724
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1327
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27566
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.978e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

DP
type: SiteQuality
SIO_000300: 7.76979e5

QD
type: SiteQuality
SIO_000300: 2.245e1

GenotypeQuality
all individuals: 378
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3734
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2543
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.627657258942175e-5
allele num: 27566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2164
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

DP
type: SiteQuality
SIO_000300: 7.76979e5

MQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.978e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.245e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

GenotypeQuality
all individuals: 304
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3721
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7203
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5314
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2460
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

QD
type: SiteQuality
SIO_000300: 1.238e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.037e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.716e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

DP
type: SiteQuality
SIO_000300: 7.91773e5

GenotypeQuality
all individuals: 1167
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4635
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2460
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 274
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28268
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.716e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.037e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
SIO_000300: 1.238e1

DP
type: SiteQuality
SIO_000300: 7.91773e5

GenotypeQuality
all individuals: 277
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2282
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4672
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 267
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3678
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 1.325381047051027e-3
allele num: 3018
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2336
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.933e-1

MQ
type: SiteQuality
SIO_000300: 5.871e1

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

QD
type: SiteQuality
SIO_000300: 3.369e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.11691e5

GenotypeQuality
all individuals: 2639
bin: 5.25e1
variant carriers: 2593

GenotypeQuality
all individuals: 1737
bin: 2.75e1
variant carriers: 1537

GenotypeQuality
all individuals: 1786
bin: 1.75e1
variant carriers: 1671

GenotypeQuality
all individuals: 3407
bin: 3.25e1
variant carriers: 3207

GenotypeQuality
all individuals: 1043
bin: 7.75e1
variant carriers: 998

GenotypeQuality
all individuals: 995
bin: 8.25e1
variant carriers: 979

GenotypeQuality
all individuals: 3124
bin: 6.25e1
variant carriers: 1681

GenotypeQuality
all individuals: 1241
bin: 5.75e1
variant carriers: 1217

GenotypeQuality
all individuals: 797
bin: 9.25e1
variant carriers: 791

GenotypeQuality
all individuals: 3089
bin: 4.75e1
variant carriers: 3043

African
type: Population
allele count: 5155
allele frequency: 7.637037037037037e-1
allele num: 6750
num of homozygotes: 1874

Other
type: Population
allele count: 446
allele frequency: 6.96875e-1
allele num: 640
num of homozygotes: 151

East Asian
type: Population
allele count: 4856
allele frequency: 7.849983834464921e-1
allele num: 6186
num of homozygotes: 1835

Latino
type: Population
allele count: 6300
allele frequency: 7.787391841779975e-1
allele num: 8090
num of homozygotes: 2336

European (Non-Finnish)
type: Population
allele count: 36211
allele frequency: 7.350994721883881e-1
allele num: 49260
num of homozygotes: 12639

South Asian
type: Population
allele count: 7385
allele frequency: 5.537642471505699e-1
allele num: 13336
num of homozygotes: 1949

European (Finnish)
type: Population
allele count: 3886
allele frequency: 8.018984729673958e-1
allele num: 4846
num of homozygotes: 1509

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.59e-2

DP
type: SiteQuality
SIO_000300: 1.10366e6

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

QD
type: SiteQuality
SIO_000300: 2.786e1

VQSLOD
type: SiteQuality
SIO_000300: 5.2e0

GenotypeQuality
all individuals: 495
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5279
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3524
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 358
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4914
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.00714543775842e-5
allele num: 49822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13350
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

VQSLOD
type: SiteQuality
SIO_000300: 4.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

FS
type: SiteQuality
SIO_000300: 4.108e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.457e0

DP
type: SiteQuality
SIO_000300: 1.003342e6

QD
type: SiteQuality
SIO_000300: 1.432e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

GenotypeQuality
all individuals: 2614
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6615
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3464
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
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variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2456
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8764
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.601024655779699e-4
allele num: 6246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50294
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.900000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

QD
type: SiteQuality
SIO_000300: 1.541e1

MQ
type: SiteQuality
SIO_000300: 5.753e1

DP
type: SiteQuality
SIO_000300: 1.010671e6

GenotypeQuality
all individuals: 1432
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6306
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5061
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2425
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8721
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48318
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.517e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 2.688e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

DP
type: SiteQuality
SIO_000300: 1.005533e6

GenotypeQuality
all individuals: 11208
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12615
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3706
bin: 7.5e0
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GenotypeQuality
all individuals: 2051
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2331
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.125752949913359e-5
allele num: 48476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.287567409998542e-5
allele num: 13722
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.799999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

MQRankSum
type: SiteQuality
SIO_000300: -8.05e-1

FS
type: SiteQuality
SIO_000300: 1.223e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.024703e6

QD
type: SiteQuality
SIO_000300: 1.656e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.18e-2

GenotypeQuality
all individuals: 534
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12615
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
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variant carriers: 0

GenotypeQuality
all individuals: 4796
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2051
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1501
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 652
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 6.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48476
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.171582619727244e-4
allele num: 6306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4428
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.223e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.84e-1

QD
type: SiteQuality
SIO_000300: 1.656e1

MQRankSum
type: SiteQuality
SIO_000300: -8.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.18e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.799999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.024703e6

GenotypeQuality
all individuals: 13124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4150
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6073
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
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variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.455180442374854e-4
allele num: 13744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48826
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.788e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.028217e6

VQSLOD
type: SiteQuality
SIO_000300: -2.789e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.44e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 368
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variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.038902255025894e-5
allele num: 49046
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.005e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e0

VQSLOD
type: SiteQuality
SIO_000300: 8.500000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.031176e6

QD
type: SiteQuality
SIO_000300: 1.064e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1502
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variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.999280259106722e-5
allele num: 50018
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14042
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.074948e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.156e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.48e-1

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -9.373e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6664
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4630
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 1.095892e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

QD
type: SiteQuality
SIO_000300: 1.213e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 2061
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 983
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GenotypeQuality
all individuals: 1200
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.970365699873897e-5
allele num: 50752
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.187e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.102852e6

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

GenotypeQuality
all individuals: 372
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
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variant carriers: 0

GenotypeQuality
all individuals: 384
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1513
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
all individuals: 838
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GenotypeQuality
all individuals: 1360
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6806
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 7.659313725490196e-4
allele num: 6528
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.992029086841001e-5
allele num: 14302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.89741990802089e-5
allele num: 51316
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.123e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 6.371e0

DP
type: SiteQuality
SIO_000300: 1.126344e6

QD
type: SiteQuality
SIO_000300: 1.326e1

GenotypeQuality
all individuals: 1310
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.457725947521866e-3
allele num: 686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.085540599218411e-4
allele num: 9212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.494818453980195e-4
allele num: 52108
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4760
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

DP
type: SiteQuality
SIO_000300: 1.153491e6

QD
type: SiteQuality
SIO_000300: 1.646e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.875257847954094e-5
allele num: 53326
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4914
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14656
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.19e0

MQ
type: SiteQuality
SIO_000300: 5.79e1

MQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

DP
type: SiteQuality
SIO_000300: 1.184314e6

VQSLOD
type: SiteQuality
SIO_000300: -1.338e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1937
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variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.380841121495327e-4
allele num: 6848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4932
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.786102062975027e-5
allele num: 14736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.197835e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 924
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GenotypeQuality
all individuals: 791
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.865950141812211e-5
allele num: 53592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7156
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.303e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.99e0

DP
type: SiteQuality
SIO_000300: 1.197835e6

GenotypeQuality
all individuals: 1788
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 244
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1532
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11711
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 4840
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.049676025917927e-4
allele num: 14816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.848907295788189e-4
allele num: 54086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6918
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

FS
type: SiteQuality
SIO_000300: 1.589e0

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.149999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.221e1

DP
type: SiteQuality
SIO_000300: 1.215506e6

GenotypeQuality
all individuals: 399
bin: 2.5e0
variant carriers: 12

GenotypeQuality
all individuals: 8472
bin: 9.75e1
variant carriers: 7578

GenotypeQuality
all individuals: 9498
bin: 2.25e1
variant carriers: 29

GenotypeQuality
all individuals: 677
bin: 4.25e1
variant carriers: 53

GenotypeQuality
all individuals: 296
bin: 1.75e1
variant carriers: 23

GenotypeQuality
all individuals: 898
bin: 8.25e1
variant carriers: 100

GenotypeQuality
all individuals: 406
bin: 9.25e1
variant carriers: 76

GenotypeQuality
all individuals: 4556
bin: 6.75e1
variant carriers: 105

GenotypeQuality
all individuals: 2426
bin: 3.25e1
variant carriers: 41

GenotypeQuality
all individuals: 1468
bin: 3.75e1
variant carriers: 43

European (Finnish)
type: Population
allele count: 590
allele frequency: 1.117847669571807e-1
allele num: 5278
num of homozygotes: 21

South Asian
type: Population
allele count: 1085
allele frequency: 7.203558624352675e-2
allele num: 15062
num of homozygotes: 52

European (Non-Finnish)
type: Population
allele count: 3805
allele frequency: 6.833201637813376e-2
allele num: 55684
num of homozygotes: 117

African
type: Population
allele count: 307
allele frequency: 4.105375768922172e-2
allele num: 7478
num of homozygotes: 6

Latino
type: Population
allele count: 214
allele frequency: 2.168186423505572e-2
allele num: 9870
num of homozygotes: 2

East Asian
type: Population
allele count: 3144
allele frequency: 4.058869093725794e-1
allele num: 7746
num of homozygotes: 589

Other
type: Population
allele count: 60
allele frequency: 8.0e-2
allele num: 750
num of homozygotes: 1

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.025e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.358e1

DP
type: SiteQuality
SIO_000300: 1.300964e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.840000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2613
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25473
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56282
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.258494840171155e-4
allele num: 7946
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.33e0

DP
type: SiteQuality
SIO_000300: 1.281334e6

FS
type: SiteQuality
SIO_000300: 3.08e0

MQ
type: SiteQuality
SIO_000300: 5.863e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

VQSLOD
type: SiteQuality
SIO_000300: -2.778e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

GenotypeQuality
all individuals: 304
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1531
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.258494840171155e-4
allele num: 7946
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15142
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5360
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.863e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: -2.778e0

FS
type: SiteQuality
SIO_000300: 3.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

DP
type: SiteQuality
SIO_000300: 1.281334e6

QD
type: SiteQuality
SIO_000300: 4.33e0

GenotypeQuality
all individuals: 687
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6131
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2073
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2029
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28976
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57756
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.509569066527795e-5
allele num: 15362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5564
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.79e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

DP
type: SiteQuality
SIO_000300: 1.315854e6

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

VQSLOD
type: SiteQuality
SIO_000300: -2.735e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2167
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 669
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.054930241962661e-5
allele num: 59348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8096
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10546
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.688e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e-1

DP
type: SiteQuality
SIO_000300: 1.355485e6

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.970000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

GenotypeQuality
all individuals: 2208
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 541
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31980
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8246
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.375111564452378e-5
allele num: 15686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.37778e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.827e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e0

MQRankSum
type: SiteQuality
SIO_000300: -6.73e-1

QD
type: SiteQuality
SIO_000300: 1.405e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.44e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

GenotypeQuality
all individuals: 597
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2348
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1562
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7427
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2284
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11042
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.203369434416366e-4
allele num: 8310
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.83e-1

DP
type: SiteQuality
SIO_000300: 1.426059e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

QD
type: SiteQuality
SIO_000300: 1.136e1

GenotypeQuality
all individuals: 2368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7463
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3593
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.6039521380682e-5
allele num: 62346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8332
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.787e0

DP
type: SiteQuality
SIO_000300: 1.4427e6

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 2.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-1

GenotypeQuality
all individuals: 836
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36322
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2394
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1566
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 320
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.141031492469192e-4
allele num: 8764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62684
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16008
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.07e-1

FS
type: SiteQuality
SIO_000300: 5.322e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

DP
type: SiteQuality
SIO_000300: 1.450902e6

QD
type: SiteQuality
SIO_000300: 1.821e1

VQSLOD
type: SiteQuality
SIO_000300: 3.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 384
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7583
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2394
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11180
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.195886151638364e-4
allele num: 8362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16008
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.322e0

QD
type: SiteQuality
SIO_000300: 1.821e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.56e-1

DP
type: SiteQuality
SIO_000300: 1.450902e6

GenotypeQuality
all individuals: 7698
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1327
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2428
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.585238261310675e-5
allele num: 63082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.417e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.55e-1

DP
type: SiteQuality
SIO_000300: 1.461924e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

GenotypeQuality
all individuals: 344
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 9.75e1
variant carriers: 204

GenotypeQuality
all individuals: 358
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7694
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37106
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.755111745126011e-4
allele num: 8412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16096
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.182033096926714e-3
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 1.862032275226104e-3
allele num: 11278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 171
allele frequency: 2.705439357023067e-3
allele num: 63206
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.916402786573781e-4
allele num: 6316
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.377617653681603e-4
allele num: 8882
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.453e1

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 5.81e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.472728e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.81e-1

GenotypeQuality
all individuals: 37893
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2421
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 9.75e1
variant carriers: 118

GenotypeQuality
all individuals: 280
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7809
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 113
allele frequency: 1.25583462991776e-2
allele num: 8998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.179245283018868e-3
allele num: 848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.186521120075937e-4
allele num: 8428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.294058408862034e-5
allele num: 63552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16148
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.289e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.3e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.481644e6

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8266
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 570
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.624776469137325e-5
allele num: 64868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.51696e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: -4.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.562e0

QD
type: SiteQuality
SIO_000300: 1.318e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 571
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.461992983319997e-4
allele num: 64988
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.146788990825688e-3
allele num: 872
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.52162e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 1.468e0

QD
type: SiteQuality
SIO_000300: 1.405e1

MQ
type: SiteQuality
SIO_000300: 5.917e1

GenotypeQuality
all individuals: 574
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1339
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2401
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.072574202666994e-5
allele num: 65092
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.104260774020266e-5
allele num: 16382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.159999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 1.227e1

MQRankSum
type: SiteQuality
SIO_000300: -5.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

DP
type: SiteQuality
SIO_000300: 1.524376e6

GenotypeQuality
all individuals: 157
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1065
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8318
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1339
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536287101333497e-5
allele num: 65092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.524376e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.159999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

QD
type: SiteQuality
SIO_000300: 1.227e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 151
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1346
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41544
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65422
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.253908692933083e-4
allele num: 9594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

QD
type: SiteQuality
SIO_000300: 1.355e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.73e-1

FS
type: SiteQuality
SIO_000300: 1.182e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.604e0

DP
type: SiteQuality
SIO_000300: 1.53437e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
all individuals: 2416
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8424
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1575
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41718
bin: 6.25e1
variant carriers: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.069434328720563e-5
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num of homozygotes: 0

VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
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DP
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MQRankSum
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BaseQRankSum
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SIO_000300: -1.838e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.525553012967201e-5
allele num: 65550
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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FS
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DP
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BaseQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65638
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.06060606060606e-5
allele num: 16500
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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QD
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MQRankSum
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SIO_000300: 6.4e-2

ReadPosRankSum
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FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: -3.18e-1

DP
type: SiteQuality
SIO_000300: 1.538145e6

InbreedingCoeff
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SIO_000300: 3.1e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.522672594938636e-5
allele num: 65674
num of homozygotes: 0

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.871e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e-1

InbreedingCoeff
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DP
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

FS
type: SiteQuality
SIO_000300: 7.413e0

QD
type: SiteQuality
SIO_000300: 1.299e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65750
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.539941e6

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: 1.3e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

FS
type: SiteQuality
SIO_000300: 1.1571e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.520034048762692e-5
allele num: 65788
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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QD
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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African
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allele num: 9684
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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ReadPosRankSum
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QD
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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FS
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DP
type: SiteQuality
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 8.665511265164644e-4
allele num: 11540
num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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East Asian
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Other
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VQSLOD
type: SiteQuality
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FS
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QD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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MQ
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Other
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African
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Latino
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South Asian
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European (Finnish)
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VQSLOD
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FS
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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Other
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 5.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.36e-1

QD
type: SiteQuality
SIO_000300: 1.131e1

FS
type: SiteQuality
SIO_000300: 1.116e0

DP
type: SiteQuality
SIO_000300: 1.542242e6

MQ
type: SiteQuality
SIO_000300: 5.89e1