1-202538315-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202538315
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202538315
    reference: chr 1
allele count: 5
allele frequency: 4.123439278233189e-5
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.530A>G
  hgvsp: ENSP00000375821.3:p.Glu177Gly
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2852A>G
  hgvsp: ENSP00000337897.4:p.Glu951Gly
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1357A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.189A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.172A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2852A>G
  hgvsp: ENSP00000476755.1:p.Glu951Gly
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1357A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.530A>G
  hgvsp: ENSP00000356239.4:p.Glu177Gly
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7301
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9431
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3796
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4929
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu951Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

1-202538332-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202538332
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202538332
    reference: chr 1
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1367+7A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1367+7A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.199+7A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2862+7A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2862+7A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.540+7A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.540+7A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.182+7A>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24831
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4909
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
hgvs: c.2862+7A>T
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

1-202538335-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202538335
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202538335
    reference: chr 1
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2862+10G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1367+10G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.182+10G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.540+10G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1367+10G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2862+10G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.540+10G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.199+10G>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24506
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-202538338-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202538338
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202538338
    reference: chr 1
allele count: 1
allele frequency: 8.268426187759421e-6
allele num: 120942
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2862+13T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.540+13T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1367+13T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1367+13T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.182+13T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.199+13T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2862+13T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.540+13T>A
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7291
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4851
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3575
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2488
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1697
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-202538344-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202538344
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202538344
    reference: chr 1
allele count: 6
allele frequency: 4.964257347100873e-5
allele num: 120864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1367+19T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2862+19T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.540+19T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1367+19T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.540+19T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.182+19T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2862+19T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.199+19T>C
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19634
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14584
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8703
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

1-202538345-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202538345
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202538345
    reference: chr 1
allele count: 1
allele frequency: 8.274446853227862e-6
allele num: 120854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.540+20C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1367+20C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1367+20C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.182+20C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2862+20C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.540+20C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.199+20C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2862+20C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7263
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8675
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

1-202538357-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202538357
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202538358
    reference: chr 1
allele count: 1
allele frequency: 8.29393713195654e-6
allele num: 120570
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.199+33dupT
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.540+33dupT
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1367+33dupT
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.182+33dupT
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2862+33dupT
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1367+33dupT
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2862+33dupT
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.540+33dupT
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 13622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1683
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4713
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8134
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

1-202538359-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202538359
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202538359
    reference: chr 1
allele count: 1
allele frequency: 8.299719469481931e-6
allele num: 120486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.540+34G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.199+34G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.540+34G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1367+34G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.182+34G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2862+34G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1367+34G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2862+34G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9397
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-202538374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202538374
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202538374
    reference: chr 1
allele count: 1
allele frequency: 8.342370901810295e-6
allele num: 119870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1367+49G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1367+49G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2862+49G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.540+49G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.182+49G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.199+49G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2862+49G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.540+49G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10184
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4059
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3394
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3104
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

1-202544079-TGTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544079
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544076
    reference: chr 1
allele count: 1
allele frequency: 8.389120987902887e-6
allele num: 119202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5522_2863-5520delGTC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5522_183-5520delGTC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5522_541-5520delGTC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-50_1368-48delGTC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5522_2863-5520delGTC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5522_1368-5520delGTC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-50_541-48delGTC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5522_200-5520delGTC
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 10967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11210
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6647
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4575
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: TGTC
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

1-202544080-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544080
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544080
    reference: chr 1
allele count: 1
allele frequency: 8.391514500537057e-6
allele num: 119168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5522G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5522G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-50G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-50G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5522G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5522G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5522G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5522G>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11222
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2250
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5256
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

1-202544084-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544084
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544084
    reference: chr 1
allele count: 2
allele frequency: 1.676502145922747e-5
allele num: 119296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5518C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-46C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5518C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5518C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5518C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5518C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5518C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-46C>G
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8189
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5698
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4590
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4737
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

1-202544085-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544085
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544085
    reference: chr 1
allele count: 1
allele frequency: 8.374648264772879e-6
allele num: 119408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5517T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5517T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-45T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5517T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5517T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-45T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5517T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5517T>C
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3139
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4759
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3975
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9642
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

1-202544093-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544093
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544093
    reference: chr 1
allele count: 1
allele frequency: 8.368200836820084e-6
allele num: 119500
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-37T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5509T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5509T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5509T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-37T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5509T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5509T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5509T>C
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11694
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4046
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2635
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

1-202544103-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544103
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544103
    reference: chr 1
allele count: 136
allele frequency: 1.136990653268012e-3
allele num: 119614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-27G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5499G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5499G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5499G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5499G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5499G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-27G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5499G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11652
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10376
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5747
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 4.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11987
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8843
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4896
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4813
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18337
  bin: 9.75e1
  variant carriers: 136
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

1-202544105-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544105
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544105
    reference: chr 1
allele count: 1
allele frequency: 8.359246999030327e-6
allele num: 119628
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5497C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5497C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5497C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5497C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-25C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5497C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-25C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5497C>G
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12661
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

1-202544106-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544106
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544106
    reference: chr 1
allele count: 1
allele frequency: 8.358408559010364e-6
allele num: 119640
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-24C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5496C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5496C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5496C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-24C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5496C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5496C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5496C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12434
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-202544112-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544112
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544112
    reference: chr 1
allele count: 1
allele frequency: 8.342231713828083e-6
allele num: 119872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5490A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-18A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5490A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5490A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5490A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-18A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5490A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5490A>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-202544113-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544113
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544113
    reference: chr 1
allele count: 1
allele frequency: 8.340422692622062e-6
allele num: 119898
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5489T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5489T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5489T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5489T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-17T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5489T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-17T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5489T>C
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11970
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4903
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4157
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2706
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4992
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-202544120-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544120
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544120
    reference: chr 1
allele count: 1
allele frequency: 8.321129010784183e-6
allele num: 120176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5482A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5482A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5482A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.541-10A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1368-10A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5482A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5482A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5482A>G
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5793
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4179
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/1-202544131-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544131
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544131
    reference: chr 1
allele count: 1
allele frequency: 8.29531314807134e-6
allele num: 120550
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5471A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5471A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5471A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5471A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5471A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1369A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5471A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.542A>C
  hgvsp: ENSP00000356239.4:p.Asn181Thr
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12455
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5884
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4982
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18382
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn181Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

1-202544138-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544138
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544138
    reference: chr 1
allele count: 1
allele frequency: 8.279105194310599e-6
allele num: 120786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5464C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5464C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5464C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1376C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.549C>T
  hgvsp: ENST00000367270.4:c.549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5464C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5464C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5464C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12763
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3445
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His183His
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-202544158-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544158
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544158
    reference: chr 1
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5444C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5444C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1396C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5444C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5444C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.569C>T
  hgvsp: ENSP00000356239.4:p.Thr190Ile
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5444C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5444C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5141
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr190Ile
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-202544171-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544171
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544171
    reference: chr 1
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5431G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5431G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1409G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.582G>A
  hgvsp: ENSP00000356239.4:p.Met194Ile
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5431G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5431G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5431G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5431G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11588
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5039
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3476
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Met194Ile
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

1-202544174-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544174
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544174
    reference: chr 1
allele count: 2
allele frequency: 1.649402916144356e-5
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5428C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5428C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5428C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.585C>T
  hgvsp: ENST00000367270.4:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5428C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1412C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5428C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5428C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5040
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4229
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18422
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn195Asn
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

1-202544175-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544175
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544175
    reference: chr 1
allele count: 4
allele frequency: 3.298261816022956e-5
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5427G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5427G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1413G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.586G>A
  hgvsp: ENSP00000356239.4:p.Glu196Lys
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5427G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5427G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5427G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5427G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5041
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2761
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu196Lys
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-202544185-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544185
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544185
    reference: chr 1
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5417A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.596A>G
  hgvsp: ENSP00000356239.4:p.Gln199Arg
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5417A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5417A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5417A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1423A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5417A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5417A>G
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9022
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15430
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3480
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln199Arg
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

1-202544209-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544209
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544209
    reference: chr 1
allele count: 5
allele frequency: 4.122623307663132e-5
allele num: 121282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1447G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.620G>A
  hgvsp: ENSP00000356239.4:p.Arg207Gln
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5393G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5393G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5393G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5393G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5393G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5393G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9016
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg207Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-202544213-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544213
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544213
    reference: chr 1
allele count: 5
allele frequency: 4.123167252156417e-5
allele num: 121266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5389G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1451G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5389G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5389G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5389G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.624G>A
  hgvsp: ENST00000367270.4:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5389G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5389G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5039
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val208Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

1-202544215-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544215
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544215
    reference: chr 1
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5387T>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5387T>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1453T>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5387T>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5387T>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5387T>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.626T>G
  hgvsp: ENSP00000356239.4:p.Val209Gly
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5387T>G
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6006
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val209Gly
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

1-202544223-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544223
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544223
    reference: chr 1
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5379C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5379C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.634C>T
  hgvsp: ENSP00000356239.4:p.Leu212Phe
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5379C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1461C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5379C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5379C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5379C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu212Phe
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

1-202544227-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544227
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544227
    reference: chr 1
allele count: 5
allele frequency: 4.129501156260323e-5
allele num: 121080
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5375C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5375C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.638C>T
  hgvsp: ENSP00000356239.4:p.Ser213Leu
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1465C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5375C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5375C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5375C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5375C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5858
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4229
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3464
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser213Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

1-202544228-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544228
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544228
    reference: chr 1
allele count: 5
allele frequency: 4.129774018765693e-5
allele num: 121072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.639G>A
  hgvsp: ENST00000367270.4:c.639G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5374G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5374G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1466G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5374G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5374G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5374G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5374G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15144
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5035
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser213Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-202544237-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544237
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544237
    reference: chr 1
allele count: 1
allele frequency: 8.275405494869249e-6
allele num: 120840
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5365C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5365C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.648C>T
  hgvsp: ENST00000367270.4:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5365C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5365C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5365C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1475C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5365C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3454
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18434
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5136
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile216Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

1-202544245-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544245
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544245
    reference: chr 1
allele count: 13
allele frequency: 1.077675536765315e-4
allele num: 120630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5357C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5357C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5357C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.656C>T
  hgvsp: ENSP00000356239.4:p.Ser219Leu
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5357C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1483C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5357C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5357C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 10852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5858
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9012
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5032
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5902
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14538
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser219Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-202544246-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544246
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544246
    reference: chr 1
allele count: 8
allele frequency: 6.638343069569835e-5
allele num: 120512
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1484G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5356G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5356G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5356G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5356G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5356G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.657G>A
  hgvsp: ENST00000367270.4:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5356G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10722
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5846
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14257
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4225
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser219Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS

1-202544255-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544255
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544255
    reference: chr 1
allele count: 1
allele frequency: 8.320021299254527e-6
allele num: 120192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5347G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5347G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1493G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5347G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5347G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.666G>T
  hgvsp: ENSP00000356239.4:p.Gln222His
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5347G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5347G>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13809
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4227
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5029
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln222His
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-202544258-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544258
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544258
    reference: chr 1
allele count: 1
allele frequency: 8.328752519447637e-6
allele num: 120066
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5344G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5344G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5344G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5344G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1496G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.669G>A
  hgvsp: ENST00000367270.4:c.669G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5344G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5344G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18450
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu223Glu
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

1-202544263-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544263
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544263
    reference: chr 1
allele count: 1
allele frequency: 8.34640937468701e-6
allele num: 119812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5339A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.674A>T
  hgvsp: ENSP00000356239.4:p.Ter225LeuextTer30
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5339A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5339A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5339A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1501A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5339A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5339A>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8996
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5732
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1672
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ter225LeuextTer30
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

1-202544281-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544281
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544281
    reference: chr 1
allele count: 1
allele frequency: 8.413117733169558e-6
allele num: 118862
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5321C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1519C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*17C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5321C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5321C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5321C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5321C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5321C>G
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5849
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4223
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2761
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

1-202544290-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544290
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544290
    reference: chr 1
allele count: 1
allele frequency: 8.452942469273554e-6
allele num: 118302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5312T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5312T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1528T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*26T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5312T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5312T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5312T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5312T>C
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/1-202544294-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544294
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544294
    reference: chr 1
allele count: 1
allele frequency: 8.475007203756124e-6
allele num: 117994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1532C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*30C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5308C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5308C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5308C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5308C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5308C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5308C>A
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5047
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

1-202544294-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544294
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544294
    reference: chr 1
allele count: 1
allele frequency: 8.475007203756124e-6
allele num: 117994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5308C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5308C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5308C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5308C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5308C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5308C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1532C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*30C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3047
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3349
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

1-202544298-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544298
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544297
    reference: chr 1
allele count: 1
allele frequency: 8.50933474021001e-6
allele num: 117518
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1538delC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5302delC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5302delC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*36delC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5302delC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5302delC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5302delC
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5302delC
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5034
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2960
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4218
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: TC
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-202544304-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544304
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544304
    reference: chr 1
allele count: 2
allele frequency: 1.710366531547711e-5
allele num: 116934
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5298A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1542A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*40A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5298A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5298A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5298A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5298A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5298A>G
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8886
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2815
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5028
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5195
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

1-202544307-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544307
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544307
    reference: chr 1
allele count: 2
allele frequency: 1.712475383166367e-5
allele num: 116790
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5295C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1545C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5295C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5295C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*43C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5295C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5295C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5295C>G
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3322
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5190
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18454
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

1-202544311-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544311
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544311
    reference: chr 1
allele count: 1
allele frequency: 8.597121683660311e-6
allele num: 116318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*46+1G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1549G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5291G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5291G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5291G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5291G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5291G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5291G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5173
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18454
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9202
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
hgvs: c.*46+1G>A
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

1-202544314-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544314
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544314
    reference: chr 1
allele count: 94
allele frequency: 8.092843859769957e-4
allele num: 116152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5288G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1552G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5288G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5288G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5288G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5288G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5288G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*46+4G>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 11911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5824
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5015
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2748
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18504
  bin: 9.75e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
hgvs: n.1552G>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-202544315-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202544315
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202544315
    reference: chr 1
allele count: 3
allele frequency: 2.584201912309415e-5
allele num: 116090
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-5287G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-5287G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-5287G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-5287G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1552+1G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-5287G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*46+5G>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-5287G>T
  variant of: http://identifiers.org/hgnc/7619
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7974
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 2.75e1
  variant carriers: 0
hgvs: n.1552+1G>T
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/1-202549551-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549551
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549551
    reference: chr 1
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-51A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1553-51A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-51A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-51A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-51A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-51A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*47-51A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-51A>C
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13735
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28153
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2566
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

1-202549558-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549558
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549558
    reference: chr 1
allele count: 49
allele frequency: 4.054546056333366e-4
allele num: 120852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-44A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-44A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-44A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-44A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-44A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1553-44A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*47-44A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-44A>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 21787
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 15220
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9960
  bin: 3.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 7941
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3023
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

1-202549561-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549561
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549561
    reference: chr 1
allele count: 1
allele frequency: 8.275816409288777e-6
allele num: 120834
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-41C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*47-41C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-41C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-41C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1553-41C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-41C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-41C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-41C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22048
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4677
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7869
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32777
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-202549578-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549578
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549578
    reference: chr 1
allele count: 1
allele frequency: 8.26296045347127e-6
allele num: 121022
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*47-24A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-24A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1553-24A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-24A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-24A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-24A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-24A>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-24A>C
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4674
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7934
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2857
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-202549579-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549579
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549579
    reference: chr 1
allele count: 557
allele frequency: 4.602164752540693e-3
allele num: 121030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-23C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-23C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*47-23C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1553-23C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-23C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-23C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-23C>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-23C>A
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 23298
  bin: 2.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 5.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 17463
  bin: 2.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10282
  bin: 3.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 3.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 4.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5058
  bin: 9.75e1
  variant carriers: 531
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 16
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

1-202549585-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549585
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549585
    reference: chr 1
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1553-17C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-17C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-17C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-17C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-17C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-17C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*47-17C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-17C>G
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37926
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

1-202549588-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549588
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549588
    reference: chr 1
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-14C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-14C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-14C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-14C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1553-14C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-14C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-14C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*47-14C>G
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2824
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4605
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

1-202549596-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549596
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549596
    reference: chr 1
allele count: 1
allele frequency: 8.252323028932645e-6
allele num: 121178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1553-6C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2863-6C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.200-6C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.541-6C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2863-6C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.183-6C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*47-6C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1368-6C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4608
  bin: 9.75e1
  variant carriers: 1
hgvs: c.2863-6C>T
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

1-202549607-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549607
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549607
    reference: chr 1
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1373A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.205A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1558A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2868A>G
  hgvsp: ENST00000608999.1:c.2868A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.546A>G
  hgvsp: ENST00000391959.3:c.546A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2868A>G
  hgvsp: ENST00000336894.4:c.2868A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*52A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.188A>G
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7977
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu956Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-202549608-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549608
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549608
    reference: chr 1
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2869A>G
  hgvsp: ENSP00000337897.4:p.Thr957Ala
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.206A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.547A>G
  hgvsp: ENSP00000375821.3:p.Thr183Ala
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*53A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2869A>G
  hgvsp: ENSP00000476755.1:p.Thr957Ala
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.189A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1559A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1374A>G
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7978
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4607
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38974
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr957Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-202549622-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549622
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549622
    reference: chr 1
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2883C>G
  hgvsp: ENST00000336894.4:c.2883C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.561C>G
  hgvsp: ENST00000391959.3:c.561C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.220C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*67C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1573C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1388C>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2883C>G
  hgvsp: ENST00000608999.1:c.2883C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.203C>G
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7979
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser961Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

1-202549622-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549622
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549622
    reference: chr 1
allele count: 5
allele frequency: 4.12275928033114e-5
allele num: 121278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2883C>T
  hgvsp: ENST00000336894.4:c.2883C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*67C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1388C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2883C>T
  hgvsp: ENST00000608999.1:c.2883C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1573C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.561C>T
  hgvsp: ENST00000391959.3:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.203C>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.220C>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10426
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2352
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser961Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-202549623-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549623
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549623
    reference: chr 1
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.562G>A
  hgvsp: ENSP00000375821.3:p.Asp188Asn
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*68G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.204G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1574G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2884G>A
  hgvsp: ENSP00000337897.4:p.Asp962Asn
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.221G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2884G>A
  hgvsp: ENSP00000476755.1:p.Asp962Asn
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1389G>A
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp962Asn
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

1-202549649-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549649
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549649
    reference: chr 1
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.230T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*94T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1415T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.588T>C
  hgvsp: ENST00000391959.3:c.588T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1600T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2910T>C
  hgvsp: ENST00000608999.1:c.2910T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2910T>C
  hgvsp: ENST00000336894.4:c.2910T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.247T>C
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10435
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39224
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn970Asn
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

1-202549666-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549666
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549666
    reference: chr 1
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1617T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*111T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.264T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.247T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2927T>A
  hgvsp: ENSP00000337897.4:p.Val976Asp
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.605T>A
  hgvsp: ENSP00000375821.3:p.Val202Asp
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1432T>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2927T>A
  hgvsp: ENSP00000476755.1:p.Val976Asp
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4602
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val976Asp
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

1-202549678-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549678
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549678
    reference: chr 1
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1629T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1444T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.617T>C
  hgvsp: ENSP00000375821.3:p.Leu206Pro
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.276T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2939T>C
  hgvsp: ENSP00000476755.1:p.Leu980Pro
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2939T>C
  hgvsp: ENSP00000337897.4:p.Leu980Pro
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*123T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.259T>C
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10417
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7909
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu980Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-202549679-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549679
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549679
    reference: chr 1
allele count: 4
allele frequency: 3.302073702285035e-5
allele num: 121136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*124G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.277G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.618G>A
  hgvsp: ENST00000391959.3:c.618G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1445G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2940G>A
  hgvsp: ENST00000336894.4:c.2940G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1630G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.260G>A
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2940G>A
  hgvsp: ENST00000608999.1:c.2940G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2781
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu980Leu
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

1-202549680-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549680
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549680
    reference: chr 1
allele count: 2
allele frequency: 1.651009592365732e-5
allele num: 121138
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1631T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.261T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2941T>C
  hgvsp: ENSP00000337897.4:p.Ser981Pro
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1446T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*125T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.278T>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.619T>C
  hgvsp: ENSP00000375821.3:p.Ser207Pro
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2941T>C
  hgvsp: ENSP00000476755.1:p.Ser981Pro
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16921
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser981Pro
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-202549685-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549685
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549685
    reference: chr 1
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.266G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.624G>C
  hgvsp: ENSP00000375821.3:p.Lys208Asn
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.2946G>C
  hgvsp: ENSP00000476755.1:p.Lys982Asn
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1451G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*130G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1636G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.2946G>C
  hgvsp: ENSP00000337897.4:p.Lys982Asn
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.283G>C
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38743
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys982Asn
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-202549700-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549700
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549700
    reference: chr 1
allele count: 1
allele frequency: 8.315040244794785e-6
allele num: 120264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.281G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.*12G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.298G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.*12G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1466G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1651G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.*12G>C
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*145G>C
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2715
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-202549701-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549701
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549701
    reference: chr 1
allele count: 1
allele frequency: 8.315316813570598e-6
allele num: 120260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.282A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.*13A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1467A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*146A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1652A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.*13A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.*13A>T
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.299A>T
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

1-202549712-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 202549712
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 202549712
    reference: chr 1
allele count: 1
allele frequency: 8.360225391676559e-6
allele num: 119614
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000375821
  ensembl transcript: ENST00000391959
  gene symbol: PPP1R12B
  hgvsc: ENST00000391959.3:c.*24A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000491336
  gene symbol: PPP1R12B
  hgvsc: ENST00000491336.1:n.1478A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000465284
  gene symbol: PPP1R12B
  hgvsc: ENST00000465284.1:n.310A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000290419
  gene symbol: PPP1R12B
  hgvsc: ENST00000290419.5:n.1663A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000337897
  ensembl transcript: ENST00000336894
  gene symbol: PPP1R12B
  hgvsc: ENST00000336894.4:c.*24A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000356239
  ensembl transcript: ENST00000367270
  gene symbol: PPP1R12B
  hgvsc: ENST00000367270.4:c.*157A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077157
  ensembl transcript: ENST00000462074
  gene symbol: PPP1R12B
  hgvsc: ENST00000462074.1:n.293A>G
  variant of: http://identifiers.org/hgnc/7619
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000077157
  ensembl protein: ENSP00000476755
  ensembl transcript: ENST00000608999
  gene symbol: PPP1R12B
  hgvsc: ENST00000608999.1:c.*24A>G
  variant of: http://identifiers.org/hgnc/7619
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9865
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 3659
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25325
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.472222222222222e-4
allele num: 8640
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.441e0

MQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

DP
type: SiteQuality
SIO_000300: 2.071174e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

QD
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SIO_000300: 1.22e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 9.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
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allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.064592e6

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.953e1

BaseQRankSum
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SIO_000300: -1.201e0

MQRankSum
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SIO_000300: 2.34e-1

FS
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SIO_000300: 1.263e0

ReadPosRankSum
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SIO_000300: 1.43e0

VQSLOD
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SIO_000300: 1.62e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503442884204829e-5
allele num: 66514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.061308e6

QD
type: SiteQuality
SIO_000300: 1.633e1

MQ
type: SiteQuality
SIO_000300: 5.943e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.172e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.052508e6

VQSLOD
type: SiteQuality
SIO_000300: -8.158e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.169e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

FS
type: SiteQuality
SIO_000300: 3.469e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.516e0

QD
type: SiteQuality
SIO_000300: 1.483e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3773
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.782575173477255e-4
allele num: 10376
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.042923e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.31e-2

QD
type: SiteQuality
SIO_000300: 1.735e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e-1

FS
type: SiteQuality
SIO_000300: 7.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.47e-1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.993946e6

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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MQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele count: 1
allele frequency: 1.16767865483419e-4
allele num: 8564
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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MQ
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65874
num of homozygotes: 0

African
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South Asian
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allele frequency: 6.120700208103807e-5
allele num: 16338
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
type: Population
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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ClippingRankSum
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BaseQRankSum
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66106
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.067e0

FS
type: SiteQuality
SIO_000300: 4.406e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 2.001774e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

MQ
type: SiteQuality
SIO_000300: 5.733e1

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.575e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.722958827634333e-5
allele num: 11464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15190
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.89e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.002445e6

VQSLOD
type: SiteQuality
SIO_000300: 2.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.619e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.023157385573493e-5
allele num: 66156
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-3

QD
type: SiteQuality
SIO_000300: 1.076e1

VQSLOD
type: SiteQuality
SIO_000300: 6.58e-1

FS
type: SiteQuality
SIO_000300: 3.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.18e0

DP
type: SiteQuality
SIO_000300: 2.007908e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.53851183470642e-5
allele num: 15294
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66176
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

DP
type: SiteQuality
SIO_000300: 2.009216e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

QD
type: SiteQuality
SIO_000300: 1.569e1

VQSLOD
type: SiteQuality
SIO_000300: -2.293e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

FS
type: SiteQuality
SIO_000300: 7.824e0

DP
type: SiteQuality
SIO_000300: 2.024395e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.03e-1

QD
type: SiteQuality
SIO_000300: 1.93e1

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.648784253184099e-5
allele num: 10364
num of homozygotes: 0

Latino
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allele count: 118
allele frequency: 1.026622585696885e-2
allele num: 11494
num of homozygotes: 0

South Asian
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allele count: 11
allele frequency: 7.137295613807423e-4
allele num: 15412
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.509661835748792e-5
allele num: 66240
num of homozygotes: 0

East Asian
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allele count: 5
allele frequency: 5.801810164771409e-4
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.408e0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 2.043342e6

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.612e0

QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15402
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11500
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.333e0

ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
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Latino
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66268
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African
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Other
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FS
type: SiteQuality
SIO_000300: 1.789e0

ClippingRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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MQ
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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European (Finnish)
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allele num: 6600
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East Asian
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Other
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allele num: 886
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66318
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South Asian
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DP
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

South Asian
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Latino
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allele frequency: 8.689607229753215e-5
allele num: 11508
num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66334
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.925e1

VQSLOD
type: SiteQuality
SIO_000300: -3.564e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.47e-1

DP
type: SiteQuality
SIO_000300: 2.058294e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 4953
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.506341698550899e-5
allele num: 66386
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.177e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -9.74e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.09e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.244536030972898e-5
allele num: 16014
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.080667e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 4.046e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e0

QD
type: SiteQuality
SIO_000300: 1.729e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16168
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.862e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.64e-1

MQ
type: SiteQuality
SIO_000300: 5.861e1

QD
type: SiteQuality
SIO_000300: 9.35e0

DP
type: SiteQuality
SIO_000300: 2.087771e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.94e1

DP
type: SiteQuality
SIO_000300: 2.097975e6

VQSLOD
type: SiteQuality
SIO_000300: 5.71e-1

FS
type: SiteQuality
SIO_000300: 3.787e0

MQRankSum
type: SiteQuality
SIO_000300: -3.07e-1

QD
type: SiteQuality
SIO_000300: 1.525e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.826e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.213e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.469e0

DP
type: SiteQuality
SIO_000300: 2.099753e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16474
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

DP
type: SiteQuality
SIO_000300: 2.100128e6

QD
type: SiteQuality
SIO_000300: 1.304e1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.074e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 1.213444970270598e-4
allele num: 16482
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.99895036737142e-5
allele num: 66690
num of homozygotes: 0

Other
type: Population
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MQRankSum
type: SiteQuality
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MQ
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
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FS
type: SiteQuality
SIO_000300: 5.41e-1

ReadPosRankSum
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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allele num: 10400
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

Latino
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allele count: 0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

BaseQRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.978e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.498050506868214e-5
allele num: 66684
num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.100961e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

FS
type: SiteQuality
SIO_000300: 1.796e0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

QD
type: SiteQuality
SIO_000300: 1.41e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3473
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18433
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4231
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15366
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5148
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6009
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499505054444011e-5
allele num: 66674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 8.84e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

FS
type: SiteQuality
SIO_000300: 7.003e0

VQSLOD
type: SiteQuality
SIO_000300: 7.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.889e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.85e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.38e-1

DP
type: SiteQuality
SIO_000300: 2.100909e6

GenotypeQuality
all individuals: 15344
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18435
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2764
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4230
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3474
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.33e-1

FS
type: SiteQuality
SIO_000300: 2.068e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.27e0

QD
type: SiteQuality
SIO_000300: 1.601e1

MQRankSum
type: SiteQuality
SIO_000300: -7.08e-1

DP
type: SiteQuality
SIO_000300: 2.100635e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.89e-1

GenotypeQuality
all individuals: 15243
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5035
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18435
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4229
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6000
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2763
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3467
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.29e-1

DP
type: SiteQuality
SIO_000300: 2.099395e6

VQSLOD
type: SiteQuality
SIO_000300: -7.403e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.985e1

FS
type: SiteQuality
SIO_000300: 9.032e0

QD
type: SiteQuality
SIO_000300: 1.039e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.255e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: -8.89e-1

GenotypeQuality
all individuals: 5983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18435
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15131
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2763
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.508409418548775e-5
allele num: 66592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.203e0

DP
type: SiteQuality
SIO_000300: 2.098541e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.158e0

QD
type: SiteQuality
SIO_000300: 1.279e1

VQSLOD
type: SiteQuality
SIO_000300: 4.23e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3463
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5138
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4229
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2763
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18436
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66590
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.320185614849188e-4
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.094588005850804e-5
allele num: 16408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.113e0

DP
type: SiteQuality
SIO_000300: 2.098641e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.325e1

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-2

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2763
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5035
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4228
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5929
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66508
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.134969325153375e-5
allele num: 16300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
SIO_000300: 3.67e-1

DP
type: SiteQuality
SIO_000300: 2.095573e6

QD
type: SiteQuality
SIO_000300: 1.079e1

FS
type: SiteQuality
SIO_000300: 2.893e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 18444
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4226
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5129
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3440
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.599653379549393e-4
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504936190705514e-5
allele num: 66448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16172
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.04626830969542e-3
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.0917e6

VQSLOD
type: SiteQuality
SIO_000300: 5.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.98e-1

QD
type: SiteQuality
SIO_000300: 1.222e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.55e-1

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5032
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18449
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 5122
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.815305885089556e-4
allele num: 8598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011141222523336e-5
allele num: 66420
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.213495712687958e-5
allele num: 16094
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

DP
type: SiteQuality
SIO_000300: 2.089003e6

MQ
type: SiteQuality
SIO_000300: 5.931e1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 1.228e1

FS
type: SiteQuality
SIO_000300: 1.107e0

GenotypeQuality
all individuals: 5116
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18448
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 241
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5773
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50793172085168e-5
allele num: 66316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.892e0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.711e0

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.436e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.28e0

DP
type: SiteQuality
SIO_000300: 2.081592e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15822
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.508659706716553e-5
allele num: 66284
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.364e0

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 15662
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.510391493475109e-5
allele num: 66208
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.019e0

QD
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ClippingRankSum
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SIO_000300: -1.879e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 2.070716e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15086
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.517128379403465e-5
allele num: 65914
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

FS
type: SiteQuality
SIO_000300: 6.840000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.68e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.041619e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.308e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14726
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.520866285436184e-5
allele num: 65752
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.255e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 8.66e-1

DP
type: SiteQuality
SIO_000300: 2.027565e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65624
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.862475981334065e-5
allele num: 14572
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.43e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.506e0

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.022219e6

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65624
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10280
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.022219e6

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.527043948324833e-5
allele num: 65486
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Other
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South Asian
type: Population
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
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African
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MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
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FS
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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allele num: 8518
num of homozygotes: 0

Latino
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Other
type: Population
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African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.061755610667156e-5
allele num: 65322
num of homozygotes: 0

South Asian
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allele num: 13922
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DP
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.447806573041842e-4
allele num: 13814
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Finnish)
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African
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Other
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 2.010727e6

GenotypeQuality
all individuals: 250
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5012
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5024
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4219
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2753
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.395355716609969e-5
allele num: 13522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e0

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.327e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.223e1

MQ
type: SiteQuality
SIO_000300: 5.908e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.931e0

FS
type: SiteQuality
SIO_000300: 8.359e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.946e0

DP
type: SiteQuality
SIO_000300: 2.008869e6

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2413
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5004
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9062
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.796238244514106e-5
allele num: 10208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 37
allele frequency: 5.611161662117076e-3
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.721437292865864e-5
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 52
allele frequency: 7.986729741352829e-4
allele num: 65108
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.52112676056338e-3
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13420
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.41e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

DP
type: SiteQuality
SIO_000300: 2.013312e6

FS
type: SiteQuality
SIO_000300: 6.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.716e0

GenotypeQuality
all individuals: 711
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5018
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2329
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18505
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 383
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5006
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variant carriers: 0

GenotypeQuality
all individuals: 3310
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4214
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.609286175214332e-5
allele num: 65086
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

DP
type: SiteQuality
SIO_000300: 2.013417e6

QD
type: SiteQuality
SIO_000300: 1.217e1

GenotypeQuality
all individuals: 1404
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8029
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
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variant carriers: 0

GenotypeQuality
all individuals: 2613
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variant carriers: 0

GenotypeQuality
all individuals: 1241
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variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 2070
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variant carriers: 0

GenotypeQuality
all individuals: 3230
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variant carriers: 0

GenotypeQuality
all individuals: 4722
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 790
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505479947007106e-5
allele num: 66424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: 7.04e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 1.725681e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

QD
type: SiteQuality
SIO_000300: 6.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.139e0

GenotypeQuality
all individuals: 2499
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
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variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4724
bin: 9.75e1
variant carriers: 48

GenotypeQuality
all individuals: 535
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variant carriers: 0

GenotypeQuality
all individuals: 1897
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variant carriers: 0

GenotypeQuality
all individuals: 32099
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variant carriers: 0

GenotypeQuality
all individuals: 986
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variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 4.819741661846925e-4
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73973556019485e-4
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 6.318069679282749e-4
allele num: 66476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.307e0

DP
type: SiteQuality
SIO_000300: 1.734497e6

QD
type: SiteQuality
SIO_000300: 1.147e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
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variant carriers: 0

GenotypeQuality
all individuals: 699
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 1102
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variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1865
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variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504664459825459e-5
allele num: 66460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.232e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 1.740309e6

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 157
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 184
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GenotypeQuality
all individuals: 719
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 282
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variant carriers: 0

GenotypeQuality
all individuals: 37618
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2388
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.0790273556231e-5
allele num: 16450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.610000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.569e1

FS
type: SiteQuality
SIO_000300: 3.641e0

DP
type: SiteQuality
SIO_000300: 1.770999e6

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.088e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 7862
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1796
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 193
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GenotypeQuality
all individuals: 37536
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GenotypeQuality
all individuals: 139
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 271
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2812
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GenotypeQuality
all individuals: 161
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variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2350
bin: 7.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21580547112462e-4
allele num: 16450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.802722110386684e-4
allele num: 66566
num of homozygotes: 0

African
type: Population
allele count: 520
allele frequency: 5.007704160246533e-2
allele num: 10384
num of homozygotes: 16

Latino
type: Population
allele count: 23
allele frequency: 1.997221257381035e-3
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

DP
type: SiteQuality
SIO_000300: 1.779359e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

QD
type: SiteQuality
SIO_000300: 1.348e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

FS
type: SiteQuality
SIO_000300: 3.116e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.19e-2

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
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GenotypeQuality
all individuals: 7925
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 231
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variant carriers: 0

GenotypeQuality
all individuals: 247
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GenotypeQuality
all individuals: 178
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4605
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GenotypeQuality
all individuals: 971
bin: 9.25e1
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GenotypeQuality
all individuals: 2354
bin: 7.25e1
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GenotypeQuality
all individuals: 697
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.269e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.493e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.141e0

VQSLOD
type: SiteQuality
SIO_000300: 5.2e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.776239e6

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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MQRankSum
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FS
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ClippingRankSum
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DP
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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South Asian
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BaseQRankSum
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DP
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FS
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ReadPosRankSum
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QD
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6604
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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FS
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DP
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MQ
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QD
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6604
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

VQSLOD
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ClippingRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.141e1

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
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Latino
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East Asian
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Other
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
type: SiteQuality
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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allele num: 66690
num of homozygotes: 0

European (Finnish)
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Other
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South Asian
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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MQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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African
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East Asian
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Latino
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FS
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BaseQRankSum
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QD
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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East Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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ReadPosRankSum
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VQSLOD
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DP
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MQ
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FS
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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East Asian
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Other
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European (Finnish)
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Latino
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QD
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FS
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MQRankSum
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39020
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4601
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 967
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.23e-1

DP
type: SiteQuality
SIO_000300: 1.784212e6

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.121e1

FS
type: SiteQuality
SIO_000300: 1.253e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.67e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4604
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 38900
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.317497103128621e-4
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002191599867904e-5
allele num: 66618
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.804e0

FS
type: SiteQuality
SIO_000300: 1.898e0

VQSLOD
type: SiteQuality
SIO_000300: 7.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.783615e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

GenotypeQuality
all individuals: 691
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7905
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variant carriers: 0

GenotypeQuality
all individuals: 4601
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 38926
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2302
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002011347602894e-5
allele num: 66622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.783571e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

VQSLOD
type: SiteQuality
SIO_000300: 5.02e-1

QD
type: SiteQuality
SIO_000300: 1.378e1

MQ
type: SiteQuality
SIO_000300: 5.928e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4600
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7885
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.648784253184099e-5
allele num: 10364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.781011e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 5.698e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 9.789999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.82e-1

GenotypeQuality
all individuals: 537
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4597
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 965
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36285
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variant carriers: 0

GenotypeQuality
all individuals: 7628
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 502
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
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variant carriers: 0

GenotypeQuality
all individuals: 2234
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.107243190423842e-5
allele num: 16374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.89e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

DP
type: SiteQuality
SIO_000300: 1.753523e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.456e0

GenotypeQuality
all individuals: 341
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7614
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variant carriers: 0

GenotypeQuality
all individuals: 685
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variant carriers: 0

GenotypeQuality
all individuals: 36480
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4598
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 198
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variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.172058134083451e-4
allele num: 8532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66128
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 1.845e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.38e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 5.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.63e-1

DP
type: SiteQuality
SIO_000300: 1.753042e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: -1.969e0