1-3624308-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624308
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624308
    reference: chr 1
allele count: 1
allele frequency: 8.350033400133601e-6
allele num: 119760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.302G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.235G>A
  hgvsp: ENSP00000367529.1:p.Glu79Lys
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.382G>A
  hgvsp: ENSP00000340740.4:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.235G>A
  hgvsp: ENSP00000367537.4:p.Glu79Lys
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.169G>A
  hgvsp: ENSP00000367539.4:p.Glu57Lys
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.382G>A
  hgvsp: ENSP00000346423.4:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.235G>A
  hgvsp: ENSP00000367534.1:p.Glu79Lys
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.434G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.382G>A
  hgvsp: ENSP00000474626.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.382G>A
  hgvsp: ENSP00000474322.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.382G>A
  hgvsp: ENSP00000367545.4:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.382G>A
  hgvsp: ENSP00000475143.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.382G>A
  hgvsp: ENSP00000350366.3:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu128Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

1-3624320-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624320
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624320
    reference: chr 1
allele count: 1
allele frequency: 8.385322331790435e-6
allele num: 119256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.247C>T
  hgvsp: ENSP00000367537.4:p.Gln83Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.247C>T
  hgvsp: ENSP00000367534.1:p.Gln83Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.394C>T
  hgvsp: ENSP00000474626.1:p.Gln132Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.394C>T
  hgvsp: ENSP00000367545.4:p.Gln132Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.181C>T
  hgvsp: ENSP00000367539.4:p.Gln61Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.394C>T
  hgvsp: ENSP00000346423.4:p.Gln132Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.394C>T
  hgvsp: ENSP00000474322.1:p.Gln132Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.394C>T
  hgvsp: ENSP00000350366.3:p.Gln132Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.394C>T
  hgvsp: ENSP00000475143.1:p.Gln132Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.314C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.247C>T
  hgvsp: ENSP00000367529.1:p.Gln83Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.394C>T
  hgvsp: ENSP00000340740.4:p.Gln132Ter
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.446C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln132Ter
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/1-3624332-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624332
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624332
    reference: chr 1
allele count: 1
allele frequency: 8.42715566641947e-6
allele num: 118664
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.259A>C
  hgvsp: ENSP00000367529.1:p.Thr87Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.406A>C
  hgvsp: ENSP00000346423.4:p.Thr136Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.259A>C
  hgvsp: ENSP00000367537.4:p.Thr87Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.406A>C
  hgvsp: ENSP00000350366.3:p.Thr136Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.406A>C
  hgvsp: ENSP00000340740.4:p.Thr136Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.406A>C
  hgvsp: ENSP00000475143.1:p.Thr136Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.406A>C
  hgvsp: ENSP00000474322.1:p.Thr136Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.259A>C
  hgvsp: ENSP00000367534.1:p.Thr87Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.193A>C
  hgvsp: ENSP00000367539.4:p.Thr65Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.406A>C
  hgvsp: ENSP00000367545.4:p.Thr136Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.458A>C
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.406A>C
  hgvsp: ENSP00000474626.1:p.Thr136Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.326A>C
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr136Pro
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

1-3624333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624333
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624333
    reference: chr 1
allele count: 3
allele frequency: 2.530535123827519e-5
allele num: 118552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.407C>T
  hgvsp: ENSP00000350366.3:p.Thr136Met
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.407C>T
  hgvsp: ENSP00000340740.4:p.Thr136Met
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.407C>T
  hgvsp: ENSP00000367545.4:p.Thr136Met
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.407C>T
  hgvsp: ENSP00000346423.4:p.Thr136Met
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.407C>T
  hgvsp: ENSP00000474626.1:p.Thr136Met
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.407C>T
  hgvsp: ENSP00000475143.1:p.Thr136Met
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.260C>T
  hgvsp: ENSP00000367534.1:p.Thr87Met
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.260C>T
  hgvsp: ENSP00000367537.4:p.Thr87Met
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.194C>T
  hgvsp: ENSP00000367539.4:p.Thr65Met
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.459C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.260C>T
  hgvsp: ENSP00000367529.1:p.Thr87Met
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.327C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.407C>T
  hgvsp: ENSP00000474322.1:p.Thr136Met
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 25538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr136Met
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-3624334-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624334
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624334
    reference: chr 1
allele count: 138
allele frequency: 1.165796543159815e-3
allele num: 118374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.408G>A
  hgvsp: ENST00000354437.4:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.408G>A
  hgvsp: ENST00000604074.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.261G>A
  hgvsp: ENST00000378280.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.261G>A
  hgvsp: ENST00000378288.4:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.261G>A
  hgvsp: ENST00000378285.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.195G>A
  hgvsp: ENST00000378290.4:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.328G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.408G>A
  hgvsp: ENST00000357733.3:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.408G>A
  hgvsp: ENST00000346387.4:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.460G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.408G>A
  hgvsp: ENST00000603362.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.408G>A
  hgvsp: ENST00000604479.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.408G>A
  hgvsp: ENST00000378295.4:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25331
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 11641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13425
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
hgvs: p.Thr136Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

1-3624334-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624334
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624334
    reference: chr 1
allele count: 1
allele frequency: 8.447801037389967e-6
allele num: 118374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.408G>T
  hgvsp: ENST00000357733.3:c.408G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.408G>T
  hgvsp: ENST00000354437.4:c.408G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.195G>T
  hgvsp: ENST00000378290.4:c.195G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.408G>T
  hgvsp: ENST00000346387.4:c.408G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.460G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.261G>T
  hgvsp: ENST00000378280.1:c.261G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.328G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.261G>T
  hgvsp: ENST00000378285.1:c.261G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.261G>T
  hgvsp: ENST00000378288.4:c.261G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.408G>T
  hgvsp: ENST00000603362.1:c.408G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.408G>T
  hgvsp: ENST00000604479.1:c.408G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.408G>T
  hgvsp: ENST00000604074.1:c.408G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.408G>T
  hgvsp: ENST00000378295.4:c.408G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11641
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr136Thr
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

1-3624343-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624343
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624343
    reference: chr 1
allele count: 2
allele frequency: 1.702562356346301e-5
allele num: 117470
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.270A>G
  hgvsp: ENST00000378288.4:c.270A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.337A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.417A>G
  hgvsp: ENST00000357733.3:c.417A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.204A>G
  hgvsp: ENST00000378290.4:c.204A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.417A>G
  hgvsp: ENST00000604074.1:c.417A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.270A>G
  hgvsp: ENST00000378280.1:c.270A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.417A>G
  hgvsp: ENST00000603362.1:c.417A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.417A>G
  hgvsp: ENST00000604479.1:c.417A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.469A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.417A>G
  hgvsp: ENST00000354437.4:c.417A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.417A>G
  hgvsp: ENST00000378295.4:c.417A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.417A>G
  hgvsp: ENST00000346387.4:c.417A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.270A>G
  hgvsp: ENST00000378285.1:c.270A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser139Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

1-3624358-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624358
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624358
    reference: chr 1
allele count: 1
allele frequency: 8.770698849284312e-6
allele num: 114016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.352G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+3G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+3G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.429+3G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

1-3624365-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624365
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624365
    reference: chr 1
allele count: 1
allele frequency: 9.054034477763291e-6
allele num: 110448
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.359C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+10C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+10C>G
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

1-3624376-A-AGGGCTGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624376
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624383
    reference: chr 1
allele count: 2
allele frequency: 1.998481154322715e-5
allele num: 100076
alternate allele: AGGGCTGC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+42_429+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+42_282+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+42_429+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+42_429+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+42_429+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+42_429+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.391_397dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+42_216+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+42_481+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+42_282+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+42_429+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+42_282+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+42_429+48dupCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8663
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

1-3624376-AGGGCTGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624376
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624369
    reference: chr 1
allele count: 74
allele frequency: 7.394380270994045e-4
allele num: 100076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.391_397delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+42_429+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+42_429+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+42_216+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+42_282+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+42_429+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+42_282+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+42_282+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+42_429+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+42_481+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+42_429+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+42_429+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+42_429+48delCGGGCTG
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6979
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 8663
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 2.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
num of homozygotes: 1
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: AGGGCTGC
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-3624377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624377
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624377
    reference: chr 1
allele count: 9
allele frequency: 1.249097873757842e-4
allele num: 72052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.371G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+22G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+22G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7555
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13949
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

1-3624378-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624378
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624378
    reference: chr 1
allele count: 1
allele frequency: 1.378777851312596e-5
allele num: 72528
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.372G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+23G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+23G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24066
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4505
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

1-3624379-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624379
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624379
    reference: chr 1
allele count: 4
allele frequency: 5.502820195350117e-5
allele num: 72690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.373G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+24G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+24G>T
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-3624383-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624383
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624383
    reference: chr 1
allele count: 2
allele frequency: 2.737401111384851e-5
allele num: 73062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.377C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+28C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+28C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24263
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-3624384-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624384
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624384
    reference: chr 1
allele count: 309
allele frequency: 4.214517580948744e-3
allele num: 73318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.378G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+29G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+29G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 2.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 2.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 15555
  bin: 7.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 3.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 24320
  bin: 1.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6307
  bin: 1.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

1-3624385-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624385
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624385
    reference: chr 1
allele count: 2
allele frequency: 2.710541295096631e-5
allele num: 73786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.379G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+30G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+30G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16002
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

1-3624390-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624390
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624390
    reference: chr 1
allele count: 6
allele frequency: 8.25536598789213e-5
allele num: 72680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.384C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+35C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+35C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24070
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5096
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS

1-3624391-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624391
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624391
    reference: chr 1
allele count: 6
allele frequency: 8.236327696024599e-5
allele num: 72848
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.385G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+36G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+36G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17404
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24074
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-3624397-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624397
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624397
    reference: chr 1
allele count: 3
allele frequency: 4.404768896458566e-5
allele num: 68108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.391C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+42C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+42C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23791
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

1-3624398-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624398
    reference: chr 1
allele count: 7
allele frequency: 1.064444512028223e-4
allele num: 65762
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.392G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+43G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+43G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19268
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23414
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD

1-3624398-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624398
    reference: chr 1
allele count: 1
allele frequency: 1.520635017183176e-5
allele num: 65762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.392G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+43G>T
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19268
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

1-3624399-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624399
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624399
    reference: chr 1
allele count: 1
allele frequency: 1.511258878645912e-5
allele num: 66170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.393G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+44G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+44G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-3624405-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624405
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624405
    reference: chr 1
allele count: 2
allele frequency: 3.224766204450177e-5
allele num: 62020
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.399A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+50A>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+50A>G
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20417
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-3624411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624411
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624411
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 56482
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.405G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+56G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+56G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21897
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/1-3624416-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624416
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624416
    reference: chr 1
allele count: 1
allele frequency: 1.98625511460692e-5
allele num: 50346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.410C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+61C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+61C>A
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17816
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9520
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5744
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

1-3624419-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624419
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624419
    reference: chr 1
allele count: 14
allele frequency: 2.902637253275833e-4
allele num: 48232
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.413C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+64C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+64C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25198
  bin: 7.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 9622
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

1-3624420-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624420
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624420
    reference: chr 1
allele count: 1
allele frequency: 2.09669979452342e-5
allele num: 47694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.414G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+65G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+65G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16797
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25432
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-3624423-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624423
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624423
    reference: chr 1
allele count: 1
allele frequency: 2.217589923271389e-5
allele num: 45094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.417C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+68C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+68C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9720
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-3624424-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624424
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624424
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 45268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.418C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+69C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+69C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9719
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26131
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ

1-3624426-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3624426
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3624426
    reference: chr 1
allele count: 1
allele frequency: 2.260806655814795e-5
allele num: 44232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.429+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.429+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.216+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.481+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.282+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.429+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.429+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000604194
  gene symbol: TP73
  hgvsc: ENST00000604194.1:n.420C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.282+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.429+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.282+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.429+71C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.429+71C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16093
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26187
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9705
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

1-3638534-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638534
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638534
    reference: chr 1
allele count: 1
allele frequency: 8.993614533681087e-6
allele num: 111190
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.430-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.217-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.430-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.283-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.430-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.283-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.430-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.283-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.430-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.482-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.430-51G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.430-51G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7378
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

1-3638536-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638536
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638536
    reference: chr 1
allele count: 3
allele frequency: 2.69735659054127e-5
allele num: 111220
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.430-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.430-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.217-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.430-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.482-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.430-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.430-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.430-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.283-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.283-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.430-49G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.283-49G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

1-3638537-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638537
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638537
    reference: chr 1
allele count: 1
allele frequency: 8.988602452090748e-6
allele num: 111252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.430-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.482-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.283-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.283-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.430-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.217-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.430-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.430-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.430-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.430-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.283-48G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.430-48G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-3638539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638539
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638539
    reference: chr 1
allele count: 1
allele frequency: 8.98763301696865e-6
allele num: 111264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.430-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.217-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.283-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.430-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.482-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.283-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.430-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.430-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.430-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.430-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.430-46G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.283-46G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7401
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-3638542-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638542
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638542
    reference: chr 1
allele count: 1
allele frequency: 8.980852821783957e-6
allele num: 111348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.430-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.283-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.430-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.217-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.430-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.283-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.430-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.482-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.430-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.430-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.283-43G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.430-43G>T
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

1-3638555-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638555
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638555
    reference: chr 1
allele count: 1
allele frequency: 8.926499205541571e-6
allele num: 112026
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.283-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.430-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.430-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.430-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.430-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.430-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.217-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.283-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.482-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.283-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.430-30G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.430-30G>T
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6920
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7878
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

1-3638564-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638564
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638564
    reference: chr 1
allele count: 1
allele frequency: 8.818653215280963e-6
allele num: 113396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.283-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.482-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.430-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.217-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.430-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.430-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.283-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.430-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.430-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.430-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.430-21G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.283-21G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7966
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

1-3638567-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638567
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638567
    reference: chr 1
allele count: 3833
allele frequency: 3.357744800883018e-2
allele num: 114154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.430-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.283-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.430-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.430-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.217-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.283-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.482-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.430-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.430-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.430-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.283-18C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.430-18C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 2.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 1.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 3.25e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 9.75e1
  variant carriers: 571
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 6.75e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.75e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 4.75e1
  variant carriers: 309
genotype depth: GenotypeDepth
  all individuals: 7723
  bin: 3.75e1
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 7.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 5.25e1
  variant carriers: 296
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 5.75e1
  variant carriers: 241
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.25e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 4.25e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 7334
  bin: 2.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 6.25e1
  variant carriers: 244
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 190
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 71
genotype quality: GenotypeQuality
num of homozygotes: 623
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum

1-3638568-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638568
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638568
    reference: chr 1
allele count: 2
allele frequency: 1.748985588358752e-5
allele num: 114352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.217-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.430-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.283-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.430-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.430-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.482-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.430-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.430-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.430-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.283-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.430-17C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.283-17C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

1-3638577-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638577
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638577
    reference: chr 1
allele count: 1
allele frequency: 8.632894782278393e-6
allele num: 115836
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.430-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.283-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.430-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.430-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.430-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.283-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.430-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.430-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.217-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.430-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.482-8C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.283-8C>G
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8423
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.430-8C>G
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-3638590-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638590
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638590
    reference: chr 1
allele count: 1
allele frequency: 8.506294658046955e-6
allele num: 117560
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.288C>G
  hgvsp: ENST00000378280.1:c.288C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.288C>G
  hgvsp: ENST00000378285.1:c.288C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.288C>G
  hgvsp: ENST00000378288.4:c.288C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.435C>G
  hgvsp: ENST00000604479.1:c.435C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.487C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.435C>G
  hgvsp: ENST00000378295.4:c.435C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.435C>G
  hgvsp: ENST00000357733.3:c.435C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.435C>G
  hgvsp: ENST00000346387.4:c.435C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.435C>G
  hgvsp: ENST00000604074.1:c.435C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.222C>G
  hgvsp: ENST00000378290.4:c.222C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.435C>G
  hgvsp: ENST00000603362.1:c.435C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.435C>G
  hgvsp: ENST00000354437.4:c.435C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser145Ser
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

1-3638592-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638592
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638592
    reference: chr 1
allele count: 3
allele frequency: 2.546819023040223e-5
allele num: 117794
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.437C>T
  hgvsp: ENSP00000367545.4:p.Pro146Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.437C>T
  hgvsp: ENSP00000340740.4:p.Pro146Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.290C>T
  hgvsp: ENSP00000367537.4:p.Pro97Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.489C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.290C>T
  hgvsp: ENSP00000367534.1:p.Pro97Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.437C>T
  hgvsp: ENSP00000346423.4:p.Pro146Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.290C>T
  hgvsp: ENSP00000367529.1:p.Pro97Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.437C>T
  hgvsp: ENSP00000475143.1:p.Pro146Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.437C>T
  hgvsp: ENSP00000350366.3:p.Pro146Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.437C>T
  hgvsp: ENSP00000474322.1:p.Pro146Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.224C>T
  hgvsp: ENSP00000367539.4:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.437C>T
  hgvsp: ENSP00000474626.1:p.Pro146Leu
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro146Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

1-3638593-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638593
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638593
    reference: chr 1
allele count: 1868
allele frequency: 1.581683629405091e-2
allele num: 118102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.438G>A
  hgvsp: ENST00000604074.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.291G>A
  hgvsp: ENST00000378288.4:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.438G>A
  hgvsp: ENST00000354437.4:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.291G>A
  hgvsp: ENST00000378285.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.490G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.291G>A
  hgvsp: ENST00000378280.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.438G>A
  hgvsp: ENST00000346387.4:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.225G>A
  hgvsp: ENST00000378290.4:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.438G>A
  hgvsp: ENST00000604479.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.438G>A
  hgvsp: ENST00000603362.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.438G>A
  hgvsp: ENST00000357733.3:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.438G>A
  hgvsp: ENST00000378295.4:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.25e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.75e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 2.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6719
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 6.25e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 4.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.25e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.75e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 7767
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 5.75e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 6.75e1
  variant carriers: 111
genotype quality: GenotypeQuality
hgvs: p.Pro146Pro
num of homozygotes: 15
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

1-3638596-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638596
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638596
    reference: chr 1
allele count: 1
allele frequency: 8.434832484226864e-6
allele num: 118556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.228C>G
  hgvsp: ENST00000378290.4:c.228C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.294C>G
  hgvsp: ENST00000378288.4:c.294C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.441C>G
  hgvsp: ENST00000603362.1:c.441C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.493C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.441C>G
  hgvsp: ENST00000346387.4:c.441C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.441C>G
  hgvsp: ENST00000354437.4:c.441C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.441C>G
  hgvsp: ENST00000604074.1:c.441C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.441C>G
  hgvsp: ENST00000604479.1:c.441C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.294C>G
  hgvsp: ENST00000378285.1:c.294C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.441C>G
  hgvsp: ENST00000357733.3:c.441C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.441C>G
  hgvsp: ENST00000378295.4:c.441C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.294C>G
  hgvsp: ENST00000378280.1:c.294C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6761
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu147Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-3638596-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638596
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638596
    reference: chr 1
allele count: 1
allele frequency: 8.434832484226864e-6
allele num: 118556
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.441C>T
  hgvsp: ENST00000378295.4:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.294C>T
  hgvsp: ENST00000378288.4:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.441C>T
  hgvsp: ENST00000357733.3:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.294C>T
  hgvsp: ENST00000378285.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.294C>T
  hgvsp: ENST00000378280.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.228C>T
  hgvsp: ENST00000378290.4:c.228C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.441C>T
  hgvsp: ENST00000354437.4:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.441C>T
  hgvsp: ENST00000604479.1:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.441C>T
  hgvsp: ENST00000603362.1:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.493C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.441C>T
  hgvsp: ENST00000604074.1:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.441C>T
  hgvsp: ENST00000346387.4:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6761
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu147Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ

1-3638620-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638620
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638620
    reference: chr 1
allele count: 1
allele frequency: 8.356173541012099e-6
allele num: 119672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.465C>T
  hgvsp: ENST00000357733.3:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.318C>T
  hgvsp: ENST00000378285.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.465C>T
  hgvsp: ENST00000603362.1:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.318C>T
  hgvsp: ENST00000378288.4:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.517C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.318C>T
  hgvsp: ENST00000378280.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.465C>T
  hgvsp: ENST00000346387.4:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.465C>T
  hgvsp: ENST00000378295.4:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.465C>T
  hgvsp: ENST00000604074.1:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.252C>T
  hgvsp: ENST00000378290.4:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.465C>T
  hgvsp: ENST00000354437.4:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.465C>T
  hgvsp: ENST00000604479.1:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile155Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-3638621-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638621
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638621
    reference: chr 1
allele count: 1
allele frequency: 8.353939717970996e-6
allele num: 119704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.466G>A
  hgvsp: ENSP00000340740.4:p.Ala156Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.466G>A
  hgvsp: ENSP00000475143.1:p.Ala156Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.466G>A
  hgvsp: ENSP00000474626.1:p.Ala156Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.319G>A
  hgvsp: ENSP00000367537.4:p.Ala107Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.253G>A
  hgvsp: ENSP00000367539.4:p.Ala85Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.518G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.466G>A
  hgvsp: ENSP00000350366.3:p.Ala156Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.466G>A
  hgvsp: ENSP00000346423.4:p.Ala156Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.466G>A
  hgvsp: ENSP00000474322.1:p.Ala156Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.319G>A
  hgvsp: ENSP00000367529.1:p.Ala107Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.319G>A
  hgvsp: ENSP00000367534.1:p.Ala107Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.466G>A
  hgvsp: ENSP00000367545.4:p.Ala156Thr
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala156Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/1-3638636-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638636
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638636
    reference: chr 1
allele count: 1
allele frequency: 8.338753523123364e-6
allele num: 119922
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.334A>C
  hgvsp: ENSP00000367529.1:p.Ile112Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.481A>C
  hgvsp: ENSP00000350366.3:p.Ile161Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.481A>C
  hgvsp: ENSP00000340740.4:p.Ile161Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.481A>C
  hgvsp: ENSP00000475143.1:p.Ile161Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.481A>C
  hgvsp: ENSP00000474322.1:p.Ile161Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.334A>C
  hgvsp: ENSP00000367537.4:p.Ile112Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.481A>C
  hgvsp: ENSP00000474626.1:p.Ile161Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.481A>C
  hgvsp: ENSP00000346423.4:p.Ile161Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.334A>C
  hgvsp: ENSP00000367534.1:p.Ile112Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.268A>C
  hgvsp: ENSP00000367539.4:p.Ile90Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.481A>C
  hgvsp: ENSP00000367545.4:p.Ile161Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.533A>C
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6836
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile161Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-3638638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638638
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638638
    reference: chr 1
allele count: 16
allele frequency: 1.33411156507963e-4
allele num: 119930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.483C>T
  hgvsp: ENST00000603362.1:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.483C>T
  hgvsp: ENST00000604479.1:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.483C>T
  hgvsp: ENST00000378295.4:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.336C>T
  hgvsp: ENST00000378280.1:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.336C>T
  hgvsp: ENST00000378288.4:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.535C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.483C>T
  hgvsp: ENST00000354437.4:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.336C>T
  hgvsp: ENST00000378285.1:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.483C>T
  hgvsp: ENST00000604074.1:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.270C>T
  hgvsp: ENST00000378290.4:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.483C>T
  hgvsp: ENST00000357733.3:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.483C>T
  hgvsp: ENST00000346387.4:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7668
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile161Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-3638648-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638648
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638648
    reference: chr 1
allele count: 1
allele frequency: 8.333888925928395e-6
allele num: 119992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.493G>T
  hgvsp: ENSP00000474322.1:p.Val165Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.493G>T
  hgvsp: ENSP00000367545.4:p.Val165Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.346G>T
  hgvsp: ENSP00000367534.1:p.Val116Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.346G>T
  hgvsp: ENSP00000367537.4:p.Val116Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.493G>T
  hgvsp: ENSP00000475143.1:p.Val165Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.493G>T
  hgvsp: ENSP00000350366.3:p.Val165Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.280G>T
  hgvsp: ENSP00000367539.4:p.Val94Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.545G>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.493G>T
  hgvsp: ENSP00000346423.4:p.Val165Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.493G>T
  hgvsp: ENSP00000474626.1:p.Val165Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.346G>T
  hgvsp: ENSP00000367529.1:p.Val116Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.493G>T
  hgvsp: ENSP00000340740.4:p.Val165Leu
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val165Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/1-3638654-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638654
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638654
    reference: chr 1
allele count: 10
allele frequency: 8.340422692622062e-5
allele num: 119898
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.499A>C
  hgvsp: ENSP00000474626.1:p.Thr167Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.499A>C
  hgvsp: ENSP00000475143.1:p.Thr167Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.499A>C
  hgvsp: ENSP00000474322.1:p.Thr167Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.352A>C
  hgvsp: ENSP00000367529.1:p.Thr118Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.499A>C
  hgvsp: ENSP00000346423.4:p.Thr167Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.286A>C
  hgvsp: ENSP00000367539.4:p.Thr96Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.352A>C
  hgvsp: ENSP00000367534.1:p.Thr118Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.551A>C
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.352A>C
  hgvsp: ENSP00000367537.4:p.Thr118Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.499A>C
  hgvsp: ENSP00000350366.3:p.Thr167Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.499A>C
  hgvsp: ENSP00000340740.4:p.Thr167Pro
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.499A>C
  hgvsp: ENSP00000367545.4:p.Thr167Pro
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6829
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Thr167Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-3638655-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638655
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638655
    reference: chr 1
allele count: 1
allele frequency: 8.333750020834376e-6
allele num: 119994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.500C>A
  hgvsp: ENSP00000474626.1:p.Thr167Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.500C>A
  hgvsp: ENSP00000367545.4:p.Thr167Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.353C>A
  hgvsp: ENSP00000367537.4:p.Thr118Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.500C>A
  hgvsp: ENSP00000475143.1:p.Thr167Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.287C>A
  hgvsp: ENSP00000367539.4:p.Thr96Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.500C>A
  hgvsp: ENSP00000474322.1:p.Thr167Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.353C>A
  hgvsp: ENSP00000367534.1:p.Thr118Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.500C>A
  hgvsp: ENSP00000346423.4:p.Thr167Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.552C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.500C>A
  hgvsp: ENSP00000350366.3:p.Thr167Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.353C>A
  hgvsp: ENSP00000367529.1:p.Thr118Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.500C>A
  hgvsp: ENSP00000340740.4:p.Thr167Asn
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr167Asn
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

1-3638655-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638655
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638655
    reference: chr 1
allele count: 1
allele frequency: 8.333750020834376e-6
allele num: 119994
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.500C>G
  hgvsp: ENSP00000474626.1:p.Thr167Ser
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.353C>G
  hgvsp: ENSP00000367537.4:p.Thr118Ser
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.500C>G
  hgvsp: ENSP00000474322.1:p.Thr167Ser
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.287C>G
  hgvsp: ENSP00000367539.4:p.Thr96Ser
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.500C>G
  hgvsp: ENSP00000475143.1:p.Thr167Ser
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.500C>G
  hgvsp: ENSP00000367545.4:p.Thr167Ser
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.500C>G
  hgvsp: ENSP00000350366.3:p.Thr167Ser
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.552C>G
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.353C>G
  hgvsp: ENSP00000367534.1:p.Thr118Ser
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.500C>G
  hgvsp: ENSP00000346423.4:p.Thr167Ser
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.500C>G
  hgvsp: ENSP00000340740.4:p.Thr167Ser
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.353C>G
  hgvsp: ENSP00000367529.1:p.Thr118Ser
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr167Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/1-3638658-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638658
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638658
    reference: chr 1
allele count: 1
allele frequency: 8.332500083325001e-6
allele num: 120012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.290C>A
  hgvsp: ENSP00000367539.4:p.Pro97Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.503C>A
  hgvsp: ENSP00000350366.3:p.Pro168Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.503C>A
  hgvsp: ENSP00000340740.4:p.Pro168Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.503C>A
  hgvsp: ENSP00000474626.1:p.Pro168Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.555C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.503C>A
  hgvsp: ENSP00000367545.4:p.Pro168Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.503C>A
  hgvsp: ENSP00000475143.1:p.Pro168Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.356C>A
  hgvsp: ENSP00000367537.4:p.Pro119Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.503C>A
  hgvsp: ENSP00000346423.4:p.Pro168Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.356C>A
  hgvsp: ENSP00000367529.1:p.Pro119Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.503C>A
  hgvsp: ENSP00000474322.1:p.Pro168Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.356C>A
  hgvsp: ENSP00000367534.1:p.Pro119Gln
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro168Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

1-3638659-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638659
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638659
    reference: chr 1
allele count: 13
allele frequency: 1.083134758627585e-4
allele num: 120022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.556G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.504G>A
  hgvsp: ENST00000378295.4:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.357G>A
  hgvsp: ENST00000378288.4:c.357G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.357G>A
  hgvsp: ENST00000378285.1:c.357G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.291G>A
  hgvsp: ENST00000378290.4:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.504G>A
  hgvsp: ENST00000604074.1:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.504G>A
  hgvsp: ENST00000604479.1:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.357G>A
  hgvsp: ENST00000378280.1:c.357G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.504G>A
  hgvsp: ENST00000346387.4:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.504G>A
  hgvsp: ENST00000354437.4:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.504G>A
  hgvsp: ENST00000603362.1:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.504G>A
  hgvsp: ENST00000357733.3:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6845
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6956
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro168Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/1-3638667-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638667
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638667
    reference: chr 1
allele count: 2
allele frequency: 1.66616681662168e-5
allele num: 120036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.512C>A
  hgvsp: ENSP00000474322.1:p.Pro171Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.564C>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.365C>A
  hgvsp: ENSP00000367534.1:p.Pro122Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.512C>A
  hgvsp: ENSP00000367545.4:p.Pro171Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.512C>A
  hgvsp: ENSP00000340740.4:p.Pro171Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.512C>A
  hgvsp: ENSP00000475143.1:p.Pro171Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.365C>A
  hgvsp: ENSP00000367537.4:p.Pro122Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.512C>A
  hgvsp: ENSP00000346423.4:p.Pro171Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.512C>A
  hgvsp: ENSP00000474626.1:p.Pro171Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.299C>A
  hgvsp: ENSP00000367539.4:p.Pro100Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.512C>A
  hgvsp: ENSP00000350366.3:p.Pro171Gln
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.365C>A
  hgvsp: ENSP00000367529.1:p.Pro122Gln
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro171Gln
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

1-3638674-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638674
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638674
    reference: chr 1
allele count: 97248
allele frequency: 8.100624739691795e-1
allele num: 120050
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.519C>T
  hgvsp: ENST00000603362.1:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.372C>T
  hgvsp: ENST00000378280.1:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.372C>T
  hgvsp: ENST00000378288.4:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.519C>T
  hgvsp: ENST00000604074.1:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.306C>T
  hgvsp: ENST00000378290.4:c.306C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.519C>T
  hgvsp: ENST00000604479.1:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.571C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.519C>T
  hgvsp: ENST00000354437.4:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.519C>T
  hgvsp: ENST00000378295.4:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.372C>T
  hgvsp: ENST00000378285.1:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.519C>T
  hgvsp: ENST00000357733.3:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.519C>T
  hgvsp: ENST00000346387.4:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 2.75e1
  variant carriers: 267
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 218
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 4499
  bin: 6.75e1
  variant carriers: 4492
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 4.25e1
  variant carriers: 1461
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 8.25e1
  variant carriers: 4090
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 8.75e1
  variant carriers: 3841
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 5.75e1
  variant carriers: 3687
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 9.25e1
  variant carriers: 3212
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 2.25e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.75e1
  variant carriers: 872
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 7.75e1
  variant carriers: 4619
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.25e1
  variant carriers: 505
genotype depth: GenotypeDepth
  all individuals: 15492
  bin: 9.75e1
  variant carriers: 15469
genotype quality: GenotypeQuality
hgvs: p.Thr173Thr
num of homozygotes: 40280
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-3638675-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638675
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638675
    reference: chr 1
allele count: 2
allele frequency: 1.66725020423815e-5
allele num: 119958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.520G>A
  hgvsp: ENSP00000350366.3:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.520G>A
  hgvsp: ENSP00000367545.4:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.307G>A
  hgvsp: ENSP00000367539.4:p.Ala103Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.373G>A
  hgvsp: ENSP00000367537.4:p.Ala125Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.520G>A
  hgvsp: ENSP00000346423.4:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.520G>A
  hgvsp: ENSP00000474322.1:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.373G>A
  hgvsp: ENSP00000367534.1:p.Ala125Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.520G>A
  hgvsp: ENSP00000475143.1:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.373G>A
  hgvsp: ENSP00000367529.1:p.Ala125Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.520G>A
  hgvsp: ENSP00000474626.1:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.520G>A
  hgvsp: ENSP00000340740.4:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.572G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala174Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

1-3638683-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638683
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638683
    reference: chr 1
allele count: 1
allele frequency: 8.338336335134414e-6
allele num: 119928
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.528G>A
  hgvsp: ENST00000357733.3:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.381G>A
  hgvsp: ENST00000378285.1:c.381G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.528G>A
  hgvsp: ENST00000354437.4:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.528G>A
  hgvsp: ENST00000346387.4:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.528G>A
  hgvsp: ENST00000604074.1:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.315G>A
  hgvsp: ENST00000378290.4:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.381G>A
  hgvsp: ENST00000378280.1:c.381G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.580G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.381G>A
  hgvsp: ENST00000378288.4:c.381G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.528G>A
  hgvsp: ENST00000378295.4:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.528G>A
  hgvsp: ENST00000604479.1:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.528G>A
  hgvsp: ENST00000603362.1:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg176Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

1-3638684-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638684
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638684
    reference: chr 1
allele count: 1
allele frequency: 8.338475393159114e-6
allele num: 119926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.382G>A
  hgvsp: ENSP00000367529.1:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.529G>A
  hgvsp: ENSP00000474322.1:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.382G>A
  hgvsp: ENSP00000367537.4:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.316G>A
  hgvsp: ENSP00000367539.4:p.Ala106Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.529G>A
  hgvsp: ENSP00000340740.4:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.529G>A
  hgvsp: ENSP00000367545.4:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.529G>A
  hgvsp: ENSP00000475143.1:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.529G>A
  hgvsp: ENSP00000346423.4:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.529G>A
  hgvsp: ENSP00000350366.3:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.581G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.382G>A
  hgvsp: ENSP00000367534.1:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.529G>A
  hgvsp: ENSP00000474626.1:p.Ala177Thr
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala177Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-3638693-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638693
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638693
    reference: chr 1
allele count: 1
allele frequency: 8.340422692622062e-6
allele num: 119898
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.538G>C
  hgvsp: ENSP00000346423.4:p.Val180Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.391G>C
  hgvsp: ENSP00000367534.1:p.Val131Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.391G>C
  hgvsp: ENSP00000367537.4:p.Val131Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.538G>C
  hgvsp: ENSP00000475143.1:p.Val180Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.590G>C
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.538G>C
  hgvsp: ENSP00000474322.1:p.Val180Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.391G>C
  hgvsp: ENSP00000367529.1:p.Val131Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.538G>C
  hgvsp: ENSP00000474626.1:p.Val180Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.538G>C
  hgvsp: ENSP00000340740.4:p.Val180Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.325G>C
  hgvsp: ENSP00000367539.4:p.Val109Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.538G>C
  hgvsp: ENSP00000350366.3:p.Val180Leu
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.538G>C
  hgvsp: ENSP00000367545.4:p.Val180Leu
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val180Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

1-3638698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638698
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638698
    reference: chr 1
allele count: 2
allele frequency: 1.668529858341815e-5
allele num: 119866
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.396C>T
  hgvsp: ENST00000378288.4:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.543C>T
  hgvsp: ENST00000354437.4:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.543C>T
  hgvsp: ENST00000378295.4:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.543C>T
  hgvsp: ENST00000357733.3:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.396C>T
  hgvsp: ENST00000378285.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.330C>T
  hgvsp: ENST00000378290.4:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.543C>T
  hgvsp: ENST00000604479.1:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.543C>T
  hgvsp: ENST00000603362.1:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.396C>T
  hgvsp: ENST00000378280.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.543C>T
  hgvsp: ENST00000346387.4:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.543C>T
  hgvsp: ENST00000604074.1:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.595C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr181Tyr
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

1-3638707-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638707
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638707
    reference: chr 1
allele count: 1
allele frequency: 8.351428094204109e-6
allele num: 119740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.405G>A
  hgvsp: ENST00000378288.4:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.405G>A
  hgvsp: ENST00000378285.1:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.552G>A
  hgvsp: ENST00000378295.4:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.339G>A
  hgvsp: ENST00000378290.4:c.339G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.552G>A
  hgvsp: ENST00000354437.4:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.552G>A
  hgvsp: ENST00000604479.1:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.552G>A
  hgvsp: ENST00000346387.4:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.604G>A
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.552G>A
  hgvsp: ENST00000604074.1:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.552G>A
  hgvsp: ENST00000357733.3:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.552G>A
  hgvsp: ENST00000603362.1:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.405G>A
  hgvsp: ENST00000378280.1:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala184Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

1-3638713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638713
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638713
    reference: chr 1
allele count: 3
allele frequency: 2.5071872701745e-5
allele num: 119656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.411C>T
  hgvsp: ENST00000378288.4:c.411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.558C>T
  hgvsp: ENST00000378295.4:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.345C>T
  hgvsp: ENST00000378290.4:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.558C>T
  hgvsp: ENST00000604074.1:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.558C>T
  hgvsp: ENST00000357733.3:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.411C>T
  hgvsp: ENST00000378285.1:c.411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.558C>T
  hgvsp: ENST00000604479.1:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.558C>T
  hgvsp: ENST00000354437.4:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.558C>T
  hgvsp: ENST00000603362.1:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.411C>T
  hgvsp: ENST00000378280.1:c.411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.558C>T
  hgvsp: ENST00000346387.4:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.610C>T
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His186His
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

1-3638719-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638719
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638719
    reference: chr 1
allele count: 4
allele frequency: 3.344649397126947e-5
allele num: 119594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.417C>T
  hgvsp: ENST00000378288.4:c.417C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.564C>T
  hgvsp: ENST00000354437.4:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.564C>T
  hgvsp: ENST00000357733.3:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.564C>T
  hgvsp: ENST00000604479.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.417C>T
  hgvsp: ENST00000378285.1:c.417C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.564C>T
  hgvsp: ENST00000604074.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.564C>T
  hgvsp: ENST00000603362.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.351C>T
  hgvsp: ENST00000378290.4:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.564C>T
  hgvsp: ENST00000346387.4:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.616C>T
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.417C>T
  hgvsp: ENST00000378280.1:c.417C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.564C>T
  hgvsp: ENST00000378295.4:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr188Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

1-3638720-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3638720
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 3638720
    reference: chr 1
allele count: 2
allele frequency: 1.672492515595993e-5
allele num: 119582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000346423
  ensembl transcript: ENST00000354437
  gene symbol: TP73
  hgvsc: ENST00000354437.4:c.565G>A
  hgvsp: ENSP00000346423.4:p.Asp189Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367529
  ensembl transcript: ENST00000378280
  gene symbol: TP73
  hgvsc: ENST00000378280.1:c.418G>A
  hgvsp: ENSP00000367529.1:p.Asp140Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367539
  ensembl transcript: ENST00000378290
  gene symbol: TP73
  hgvsc: ENST00000378290.4:c.352G>A
  hgvsp: ENSP00000367539.4:p.Asp118Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000475143
  ensembl transcript: ENST00000604074
  gene symbol: TP73
  hgvsc: ENST00000604074.1:c.565G>A
  hgvsp: ENSP00000475143.1:p.Asp189Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474626
  ensembl transcript: ENST00000603362
  gene symbol: TP73
  hgvsc: ENST00000603362.1:c.565G>A
  hgvsp: ENSP00000474626.1:p.Asp189Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367545
  ensembl transcript: ENST00000378295
  gene symbol: TP73
  hgvsc: ENST00000378295.4:c.565G>A
  hgvsp: ENSP00000367545.4:p.Asp189Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000474322
  ensembl transcript: ENST00000604479
  gene symbol: TP73
  hgvsc: ENST00000604479.1:c.565G>A
  hgvsp: ENSP00000474322.1:p.Asp189Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000350366
  ensembl transcript: ENST00000357733
  gene symbol: TP73
  hgvsc: ENST00000357733.3:c.565G>A
  hgvsp: ENSP00000350366.3:p.Asp189Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000340740
  ensembl transcript: ENST00000346387
  gene symbol: TP73
  hgvsc: ENST00000346387.4:c.565G>A
  hgvsp: ENSP00000340740.4:p.Asp189Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367537
  ensembl transcript: ENST00000378288
  gene symbol: TP73
  hgvsc: ENST00000378288.4:c.418G>A
  hgvsp: ENSP00000367537.4:p.Asp140Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078900
  ensembl protein: ENSP00000367534
  ensembl transcript: ENST00000378285
  gene symbol: TP73
  hgvsc: ENST00000378285.1:c.418G>A
  hgvsp: ENSP00000367534.1:p.Asp140Asn
  variant of: http://identifiers.org/hgnc/12003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078900
  ensembl transcript: ENST00000603364
  gene symbol: TP73
  hgvsc: ENST00000603364.1:n.617G>A
  variant of: http://identifiers.org/hgnc/12003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp189Asn
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 4406
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 129
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3043
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2105
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37805
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3568
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527183872938302e-5
allele num: 65480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.207e0

QD
type: SiteQuality
SIO_000300: 1.141e1

MQRankSum
type: SiteQuality
SIO_000300: 9.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.710422e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.088e0

VQSLOD
type: SiteQuality
SIO_000300: 8.42e-1

GenotypeDepth
all individuals: 11724
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 282
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14050
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2079
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9441
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3490
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37287
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534307106910519e-5
allele num: 65176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e-1

DP
type: SiteQuality
SIO_000300: 1.696354e6

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

FS
type: SiteQuality
SIO_000300: 3.763e0

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.878e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-3

QD
type: SiteQuality
SIO_000300: 1.293e1

GenotypeDepth
all individuals: 6
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 143
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4235
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 944
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.098304671301378e-5
allele num: 16398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64860
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

BaseQRankSum
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SIO_000300: 2.78e0

MQRankSum
type: SiteQuality
SIO_000300: 6.24e-1

InbreedingCoeff
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SIO_000300: -1.7e-3

FS
type: SiteQuality
SIO_000300: 3.381e0

ClippingRankSum
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SIO_000300: -1.692e0

VQSLOD
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SIO_000300: 5.76e-1

QD
type: SiteQuality
SIO_000300: 1.299e1

DP
type: SiteQuality
SIO_000300: 1.674313e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2017
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.755034144633164e-5
allele num: 11422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542876539019348e-5
allele num: 64814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.1020258725897e-5
allele num: 16388
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.081e0

InbreedingCoeff
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SIO_000300: -1.8e-3

ClippingRankSum
type: SiteQuality
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MQRankSum
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SIO_000300: 1.95e-1

FS
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SIO_000300: 2.143e1

DP
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SIO_000300: 1.671568e6

QD
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SIO_000300: 1.036e1

BaseQRankSum
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SIO_000300: 4.25e0

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

GenotypeDepth
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variant carriers: 13

GenotypeDepth
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variant carriers: 5

GenotypeDepth
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variant carriers: 6

GenotypeDepth
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3380
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 41
allele frequency: 6.335177230445935e-4
allele num: 64718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10054
num of homozygotes: 0

South Asian
type: Population
allele count: 91
allele frequency: 5.558949297495419e-3
allele num: 16370
num of homozygotes: 0

Latino
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allele count: 5
allele frequency: 4.381352961794602e-4
allele num: 11412
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

BaseQRankSum
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SIO_000300: 6.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

MQ
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SIO_000300: 5.975e1

ClippingRankSum
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SIO_000300: -1.28e-1

QD
type: SiteQuality
SIO_000300: 1.387e1

InbreedingCoeff
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SIO_000300: 4.9e-3

FS
type: SiteQuality
SIO_000300: 1.717e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

DP
type: SiteQuality
SIO_000300: 1.666748e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2250
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.946290033817386e-5
allele num: 10054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.387e1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.717e0

MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.666748e6

ReadPosRankSum
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SIO_000300: 3.02e-1

ClippingRankSum
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SIO_000300: -1.28e-1

VQSLOD
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SIO_000300: 3.98e0

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3274
bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.11332503113325e-5
allele num: 64240
num of homozygotes: 0

MQRankSum
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SIO_000300: -3.8e-1

ReadPosRankSum
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

FS
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BaseQRankSum
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SIO_000300: 4.65e-1

ClippingRankSum
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SIO_000300: 6.34e-1

InbreedingCoeff
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SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

QD
type: SiteQuality
SIO_000300: 1.357e1

DP
type: SiteQuality
SIO_000300: 1.623828e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.2672348959639e-5
allele num: 15956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

FS
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BaseQRankSum
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VQSLOD
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QD
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SIO_000300: 1.018e1

DP
type: SiteQuality
SIO_000300: 1.506344e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 1
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1758
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GenotypeQuality
all individuals: 10650
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9246
num of homozygotes: 0

South Asian
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East Asian
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European (Non-Finnish)
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Latino
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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DP
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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African
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European (Finnish)
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South Asian
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MQ
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FS
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VQSLOD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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Other
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QD
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VQSLOD
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MQ
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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East Asian
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Latino
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Other
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European (Non-Finnish)
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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QD
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FS
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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African
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QD
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FS
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MQ
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Latino
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African
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South Asian
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VQSLOD
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InbreedingCoeff
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DP
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QD
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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European (Non-Finnish)
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European (Finnish)
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VQSLOD
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DP
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MQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 4

Latino
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allele count: 4
allele frequency: 6.91085003455425e-4
allele num: 5788
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 8.168599901976801e-5
allele num: 12242
num of homozygotes: 0

European (Non-Finnish)
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allele count: 276
allele frequency: 6.846596546933916e-3
allele num: 40312
num of homozygotes: 0

Other
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allele count: 2
allele frequency: 3.759398496240601e-3
allele num: 532
num of homozygotes: 0

European (Finnish)
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allele count: 21
allele frequency: 6.533914125700062e-3
allele num: 3214
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5112
num of homozygotes: 0

African
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allele count: 5
allele frequency: 8.172605426610003e-4
allele num: 6118
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.31e-1

ClippingRankSum
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SIO_000300: 1.31e-1

MQRankSum
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SIO_000300: 1.93e-1

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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MQ
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DP
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.91e-2

QD
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SIO_000300: 1.429e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5152
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 40420
num of homozygotes: 0

South Asian
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allele frequency: 1.609528408176404e-4
allele num: 12426
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3242
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
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SIO_000300: 2.236e0

InbreedingCoeff
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SIO_000300: -1.57e-2

ReadPosRankSum
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QD
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ClippingRankSum
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SIO_000300: 1.67e0

BaseQRankSum
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MQ
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DP
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SIO_000300: 7.58069e5

VQSLOD
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SIO_000300: 7.29e-1

MQRankSum
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SIO_000300: 6.840000000000001e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3166
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 5.248425472358292e-4
allele num: 5716
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 7.524831945419886e-5
allele num: 39868
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.72e-2

DP
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ReadPosRankSum
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SIO_000300: 3.55e-1

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 1.68e0

QD
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SIO_000300: 9.720000000000001e0

VQSLOD
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SIO_000300: 3.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

MQRankSum
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SIO_000300: 5.3e-2

FS
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SIO_000300: 0.0e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19
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variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 8.698677800974252e-4
allele num: 5748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.501125506477915e-5
allele num: 39982
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.427e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

MQRankSum
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SIO_000300: -2.01e-1

MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.64e-2

VQSLOD
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DP
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SIO_000300: 7.34634e5

QD
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SIO_000300: 1.268e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11740
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.669656682150675e-5
allele num: 37458
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5172
num of homozygotes: 0

African
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allele count: 2
allele frequency: 3.487966515521451e-4
allele num: 5734
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
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FS
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DP
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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SIO_000300: -5.620000000000001e-1

QD
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BaseQRankSum
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SIO_000300: 2.55e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4826
num of homozygotes: 0

South Asian
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allele frequency: 8.620689655172413e-5
allele num: 11600
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 6
allele frequency: 1.65892501658925e-4
allele num: 36168
num of homozygotes: 0

Other
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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QD
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DP
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MQ
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 11600
num of homozygotes: 0

East Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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European (Non-Finnish)
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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DP
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MQ
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 2.05761316872428e-3
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QD
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FS
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.933755794167693e-5
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num of homozygotes: 0

East Asian
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South Asian
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African
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Other
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allele num: 458
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European (Finnish)
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allele frequency: 0.0e0
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MQ
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BaseQRankSum
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MQRankSum
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FS
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QD
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VQSLOD
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DP
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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Other
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East Asian
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European (Finnish)
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South Asian
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DP
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QD
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ReadPosRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 27794
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 9788
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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BaseQRankSum
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VQSLOD
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DP
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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QD
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GenotypeDepth
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variant carriers: 9

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 3056
num of homozygotes: 0

European (Finnish)
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allele count: 6
allele frequency: 3.676470588235294e-3
allele num: 1632
num of homozygotes: 0

African
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Latino
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allele frequency: 3.455425017277125e-4
allele num: 2894
num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.630985491994287e-4
allele num: 26606
num of homozygotes: 0

DP
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MQ
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BaseQRankSum
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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Latino
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allele frequency: 3.479471120389701e-4
allele num: 2874
num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

European (Finnish)
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Other
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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QD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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South Asian
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African
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Other
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MQ
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 25016
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2688
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1494
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
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SIO_000300: 5.48601e5

InbreedingCoeff
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SIO_000300: -2.88e-2

ClippingRankSum
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SIO_000300: -3.61e-1

VQSLOD
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BaseQRankSum
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FS
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QD
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SIO_000300: 8.699999999999999e0

MQRankSum
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SIO_000300: 0.0e0

MQ
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SIO_000300: 6.0e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2740
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 8818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.090983472426771e-5
allele num: 24444
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -2.99e-2

ReadPosRankSum
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SIO_000300: 7.2e-1

ClippingRankSum
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BaseQRankSum
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SIO_000300: 1.92e0

MQRankSum
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SIO_000300: 6.8e-2

VQSLOD
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SIO_000300: 3.46e0

DP
type: SiteQuality
SIO_000300: 5.48913e5

QD
type: SiteQuality
SIO_000300: 1.125e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.170138076293003e-4
allele num: 8546
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63102
num of homozygotes: 0

African
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Latino
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allele frequency: 0.0e0
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Other
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ClippingRankSum
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SIO_000300: 5.09e-1

FS
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SIO_000300: 2.591e0

QD
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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SIO_000300: 7.75e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 2.359086e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 342
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63136
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
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allele frequency: 2.8328611898017e-4
allele num: 10590
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African
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allele frequency: 0.0e0
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Other
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InbreedingCoeff
type: SiteQuality
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FS
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MQRankSum
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QD
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BaseQRankSum
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DP
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ClippingRankSum
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SIO_000300: 1.54e0

VQSLOD
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 9.922603691208574e-5
allele num: 10078
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63148
num of homozygotes: 0

Latino
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VQSLOD
type: SiteQuality
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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MQ
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FS
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QD
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ClippingRankSum
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SIO_000300: 3.52e-1

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
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num of homozygotes: 0

East Asian
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allele num: 8558
num of homozygotes: 0

South Asian
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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Latino
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Other
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MQRankSum
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FS
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MQ
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DP
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QD
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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MQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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DP
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MQ
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FS
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.718395815170009e-5
allele num: 11470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

DP
type: SiteQuality
SIO_000300: 2.390745e6

MQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

FS
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.909e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.192e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.268e0

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

GenotypeDepth
all individuals: 1684
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2990
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3119
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.3236224404861e-5
allele num: 12014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.94e-1

FS
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.42e-1

DP
type: SiteQuality
SIO_000300: 2.410626e6

QD
type: SiteQuality
SIO_000300: 1.351e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 241
bin: 9.25e1
variant carriers: 56

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 6

GenotypeQuality
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bin: 6.25e1
variant carriers: 4

GenotypeQuality
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bin: 3.25e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 11

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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bin: 4.75e1
variant carriers: 3

GenotypeQuality
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bin: 6.75e1
variant carriers: 8

GenotypeQuality
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bin: 2.25e1
variant carriers: 6

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 2.5e0
variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 2111
bin: 8.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2988
bin: 9.25e1
variant carriers: 13

GenotypeQuality
all individuals: 31047
bin: 9.75e1
variant carriers: 3146

GenotypeQuality
all individuals: 450
bin: 2.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 196
allele frequency: 1.703755215577191e-2
allele num: 11504
num of homozygotes: 6

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 3483
allele frequency: 3.41069330199765e-1
allele num: 10212
num of homozygotes: 614

European (Non-Finnish)
type: Population
allele count: 127
allele frequency: 1.987542646092209e-3
allele num: 63898
num of homozygotes: 2

South Asian
type: Population
allele count: 7
allele frequency: 5.60179257362356e-4
allele num: 12496
num of homozygotes: 0

Other
type: Population
allele count: 19
allele frequency: 2.322738386308068e-2
allele num: 818
num of homozygotes: 1

DP
type: SiteQuality
SIO_000300: 2.506004e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.472e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.74e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.724e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.953e0

GenotypeDepth
all individuals: 7719
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
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variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
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GenotypeQuality
all individuals: 87
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GenotypeQuality
all individuals: 543
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variant carriers: 0

GenotypeQuality
all individuals: 2416
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30620
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 274
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variant carriers: 0

GenotypeQuality
all individuals: 3575
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7247
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.916402786573781e-5
allele num: 12632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563770563582911e-5
allele num: 63948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.205e1

FS
type: SiteQuality
SIO_000300: 1.477e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.233e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 2.495848e6

GenotypeDepth
all individuals: 253
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 568
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variant carriers: 0

GenotypeDepth
all individuals: 7741
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 816
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variant carriers: 0

GenotypeQuality
all individuals: 115
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GenotypeQuality
all individuals: 30656
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variant carriers: 1

GenotypeQuality
all individuals: 2208
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variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7728
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variant carriers: 0

GenotypeQuality
all individuals: 439
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variant carriers: 0

GenotypeQuality
all individuals: 284
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variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 111
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2477
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GenotypeQuality
all individuals: 3699
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variant carriers: 0

GenotypeQuality
all individuals: 341
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variant carriers: 0

GenotypeQuality
all individuals: 362
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variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.75e1
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GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 73
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GenotypeQuality
all individuals: 3068
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variant carriers: 0

GenotypeQuality
all individuals: 3298
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3275
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555161581288296e-5
allele num: 64302
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.519e1

MQRankSum
type: SiteQuality
SIO_000300: 7.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.511238e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.305e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.18e-1

GenotypeDepth
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bin: 1.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 6939
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3366
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GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 2198
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14910
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543924656476764e-5
allele num: 64770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.735e0

QD
type: SiteQuality
SIO_000300: 1.127e1

MQRankSum
type: SiteQuality
SIO_000300: -2.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.530603e6

GenotypeDepth
all individuals: 1968
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 266
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.634819532908705e-5
allele num: 15072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542590935735662e-5
allele num: 64826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

QD
type: SiteQuality
SIO_000300: 2.223e1

FS
type: SiteQuality
SIO_000300: 3.99e0

VQSLOD
type: SiteQuality
SIO_000300: -2.05e0

DP
type: SiteQuality
SIO_000300: 2.534535e6

BaseQRankSum
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SIO_000300: -1.468e0

GenotypeDepth
all individuals: 4119
bin: 5.25e1
variant carriers: 63

GenotypeDepth
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bin: 3.25e1
variant carriers: 13

GenotypeDepth
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variant carriers: 752

GenotypeDepth
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variant carriers: 19

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 356
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GenotypeQuality
all individuals: 35
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GenotypeQuality
all individuals: 2529
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GenotypeQuality
all individuals: 205
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GenotypeQuality
all individuals: 3825
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GenotypeQuality
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GenotypeQuality
all individuals: 100
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GenotypeQuality
all individuals: 3219
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 50
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GenotypeQuality
all individuals: 66
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1847

GenotypeQuality
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European (Non-Finnish)
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allele count: 1583
allele frequency: 2.437859980903687e-2
allele num: 64934
num of homozygotes: 14

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
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European (Finnish)
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allele count: 112
allele frequency: 1.69337768370124e-2
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 34
allele frequency: 2.227463312368973e-3
allele num: 15264
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Other
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allele frequency: 1.152073732718894e-2
allele num: 868
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African
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allele count: 36
allele frequency: 3.510140405616225e-3
allele num: 10256
num of homozygotes: 0

Latino
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allele frequency: 8.061719833564494e-3
allele num: 11536
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ClippingRankSum
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SIO_000300: -5.0e-2

MQRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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FS
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BaseQRankSum
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QD
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MQRankSum
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VQSLOD
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MQ
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DP
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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SIO_000300: -8.37e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.536900992838042e-5
allele num: 65066
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VQSLOD
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DP
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BaseQRankSum
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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SIO_000300: 5.913e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528631263566603e-5
allele num: 65418
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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Other
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allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: -2.12e-1

InbreedingCoeff
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ClippingRankSum
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MQ
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SIO_000300: 5.909e1

MQRankSum
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DP
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VQSLOD
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FS
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BaseQRankSum
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SIO_000300: -1.605e0

QD
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SIO_000300: 1.033e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Other
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East Asian
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South Asian
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BaseQRankSum
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InbreedingCoeff
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FS
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DP
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

South Asian
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African
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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FS
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VQSLOD
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ReadPosRankSum
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DP
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QD
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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Other
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European (Non-Finnish)
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African
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East Asian
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South Asian
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VQSLOD
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
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DP
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MQRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525180733916969e-5
allele num: 65566
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 2.4e-3

ClippingRankSum
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SIO_000300: -1.101e0

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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MQ
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SIO_000300: 5.863e1

DP
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QD
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 3070
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.143553794574825e-4
allele num: 6562
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.051106025934401e-5
allele num: 65550
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.746588693957115e-5
allele num: 10260
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
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FS
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VQSLOD
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DP
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InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

BaseQRankSum
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SIO_000300: -4.237e0

QD
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SIO_000300: 2.0e-1

ClippingRankSum
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SIO_000300: -1.704e0

ReadPosRankSum
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SIO_000300: 6.74e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.525180733916969e-5
allele num: 65566
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.242e1

DP
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SIO_000300: 2.643369e6

InbreedingCoeff
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SIO_000300: 4.2e-3

FS
type: SiteQuality
SIO_000300: 6.19e-1

MQRankSum
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SIO_000300: 3.16e-1

ClippingRankSum
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SIO_000300: 4.35e-1

ReadPosRankSum
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SIO_000300: 7.26e-1

VQSLOD
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SIO_000300: 3.21e0

BaseQRankSum
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SIO_000300: 8.28e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeDepth
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bin: 7.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525180733916969e-5
allele num: 65566
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.28e-1

MQ
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SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.35e-1

QD
type: SiteQuality
SIO_000300: 1.242e1

MQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

FS
type: SiteQuality
SIO_000300: 6.19e-1

DP
type: SiteQuality
SIO_000300: 2.643369e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524855138761818e-5
allele num: 65580
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.644504e6

BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.6e-2

VQSLOD
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InbreedingCoeff
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MQ
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ReadPosRankSum
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FS
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SIO_000300: 7.142e0

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

QD
type: SiteQuality
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.735202492211838e-5
allele num: 10272
num of homozygotes: 0

East Asian
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allele count: 9
allele frequency: 1.042149143121816e-3
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731301939058172e-4
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
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VQSLOD
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ClippingRankSum
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MQ
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SIO_000300: 5.947e1

BaseQRankSum
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 5.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

QD
type: SiteQuality
SIO_000300: 1.245e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731301939058172e-4
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65576
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African
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allele count: 0
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Other
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allele count: 0
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MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

VQSLOD
type: SiteQuality
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DP
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 4.764e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.323e1

GenotypeDepth
all individuals: 4632
bin: 7.25e1
variant carriers: 4629

GenotypeDepth
all individuals: 4369
bin: 6.25e1
variant carriers: 4361

GenotypeDepth
all individuals: 2142
bin: 4.75e1
variant carriers: 2132

GenotypeDepth
all individuals: 3043
bin: 5.25e1
variant carriers: 3039

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 30

GenotypeQuality
all individuals: 61
bin: 2.25e1
variant carriers: 51

GenotypeQuality
all individuals: 186
bin: 7.75e1
variant carriers: 85

GenotypeQuality
all individuals: 56366
bin: 9.75e1
variant carriers: 56314

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 26

GenotypeQuality
all individuals: 519
bin: 6.75e1
variant carriers: 55

GenotypeQuality
all individuals: 90
bin: 1.25e1
variant carriers: 87

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 6

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 15

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 29

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 77

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 26

GenotypeQuality
all individuals: 151
bin: 8.25e1
variant carriers: 94

GenotypeQuality
all individuals: 116
bin: 1.75e1
variant carriers: 113

GenotypeQuality
all individuals: 77
bin: 8.75e1
variant carriers: 54

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 31

GenotypeQuality
all individuals: 146
bin: 7.25e1
variant carriers: 39

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 34

GenotypeQuality
all individuals: 2256
bin: 6.25e1
variant carriers: 44

GenotypeQuality
all individuals: 159
bin: 9.25e1
variant carriers: 144

African
type: Population
allele count: 7914
allele frequency: 7.695449241540256e-1
allele num: 10284
num of homozygotes: 3040

European (Non-Finnish)
type: Population
allele count: 58878
allele frequency: 8.971749001919971e-1
allele num: 65626
num of homozygotes: 26416

East Asian
type: Population
allele count: 4458
allele frequency: 5.180106902161283e-1
allele num: 8606
num of homozygotes: 1130

Other
type: Population
allele count: 739
allele frequency: 8.303370786516854e-1
allele num: 890
num of homozygotes: 303

South Asian
type: Population
allele count: 12504
allele frequency: 7.576345128453709e-1
allele num: 16504
num of homozygotes: 4750

European (Finnish)
type: Population
allele count: 5602
allele frequency: 8.475037821482602e-1
allele num: 6610
num of homozygotes: 2365

Latino
type: Population
allele count: 7153
allele frequency: 6.203816131830009e-1
allele num: 11530
num of homozygotes: 2276

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.950000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.67e0

MQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

FS
type: SiteQuality
SIO_000300: 5.43e-1

DP
type: SiteQuality
SIO_000300: 4.83133e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.21e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 2.9e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.71e-1

GenotypeDepth
all individuals: 2528
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10230
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30385
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variant carriers: 0

GenotypeDepth
all individuals: 561
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variant carriers: 0

GenotypeQuality
all individuals: 2399
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variant carriers: 0

GenotypeQuality
all individuals: 168
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39583
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variant carriers: 0

GenotypeQuality
all individuals: 8218
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 4676
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variant carriers: 2

GenotypeQuality
all individuals: 1383
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 767
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variant carriers: 0

GenotypeQuality
all individuals: 554
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52597204419215e-5
allele num: 65532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.82e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 1.793216e6

QD
type: SiteQuality
SIO_000300: 1.482e1

FS
type: SiteQuality
SIO_000300: 7.921e0

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.55e-1

GenotypeDepth
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1452
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 139
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variant carriers: 0

GenotypeDepth
all individuals: 30391
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 1374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 550
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 4661
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 189
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 760
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variant carriers: 0

GenotypeQuality
all individuals: 39688
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variant carriers: 0

GenotypeQuality
all individuals: 8224
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variant carriers: 0

GenotypeQuality
all individuals: 2160
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variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.792016e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.49e-1

FS
type: SiteQuality
SIO_000300: 1.106e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.754e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: -1.081e0

QD
type: SiteQuality
SIO_000300: 1.105e1

GenotypeDepth
all individuals: 215
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1452
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2516
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variant carriers: 0

GenotypeQuality
all individuals: 2161
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variant carriers: 0

GenotypeQuality
all individuals: 387
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 2390
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 1373
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 4659
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variant carriers: 1

GenotypeQuality
all individuals: 39702
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 193
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variant carriers: 0

GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 8227
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variant carriers: 0

GenotypeQuality
all individuals: 760
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variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.478e0

VQSLOD
type: SiteQuality
SIO_000300: -1.967e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.791971e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.653e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 2.511e1

GenotypeDepth
all individuals: 1442
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 549
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1132
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39730
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 547
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variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.25e1
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GenotypeQuality
all individuals: 2154
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4630
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8220
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 1364
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65506
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.074e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

QD
type: SiteQuality
SIO_000300: 2.506e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 1.790438e6

FS
type: SiteQuality
SIO_000300: 1.052e0

VQSLOD
type: SiteQuality
SIO_000300: -1.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.48e-1

GenotypeDepth
all individuals: 11540
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 202
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variant carriers: 0

GenotypeDepth
all individuals: 214
bin: 6.75e1
variant carriers: 2

GenotypeDepth
all individuals: 134
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variant carriers: 0

GenotypeQuality
all individuals: 32
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GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8218
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 754
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GenotypeQuality
all individuals: 222
bin: 2.25e1
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GenotypeQuality
all individuals: 39718
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 1358
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GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 2377
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GenotypeQuality
all individuals: 545
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GenotypeQuality
all individuals: 4625
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variant carriers: 2

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526810797605961e-5
allele num: 65496
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

DP
type: SiteQuality
SIO_000300: 1.789126e6

QD
type: SiteQuality
SIO_000300: 1.206e1

FS
type: SiteQuality
SIO_000300: 1.423e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.86e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.232e0

GenotypeDepth
all individuals: 1432
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1129
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variant carriers: 0

GenotypeDepth
all individuals: 348
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
all individuals: 39644
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 416
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GenotypeQuality
all individuals: 2365
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variant carriers: 0

GenotypeQuality
all individuals: 32
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GenotypeQuality
all individuals: 2148
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variant carriers: 0

GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 269
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variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 4613
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 40
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GenotypeQuality
all individuals: 1351
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GenotypeQuality
all individuals: 751
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52849107361213e-5
allele num: 65424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.568e1

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.786521e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.692e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeDepth
all individuals: 1125
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11460
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 109
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 547
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2348
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39534
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8155
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4601
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.817396426467701e-5
allele num: 10186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529519730804527e-5
allele num: 65380
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

DP
type: SiteQuality
SIO_000300: 1.783546e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 2.978e0

QD
type: SiteQuality
SIO_000300: 1.261e1

GenotypeDepth
all individuals: 30209
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 74
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 284
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4590
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 742
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39553
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8134
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.061005846521167e-5
allele num: 65338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737921445950643e-4
allele num: 11508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.16e-1

DP
type: SiteQuality
SIO_000300: 1.781504e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0