3-64672200-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672200
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672200
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 30064
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.526+44C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.516+44C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1186G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1186G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1186G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.516+44C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  hgvsc: ENST00000482490.1:n.43+44C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1186G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.516+44C>A
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30482
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6266
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11268
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6750
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

3-64672201-C-CGAGGAGGCGGAAGGGGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672201
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672218
    reference: chr 3
allele count: 1
allele frequency: 3.394894079304725e-5
allele num: 29456
alternate allele: CGAGGAGGCGGAAGGGGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9299
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3616
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3245
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21452
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5790
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

3-64672204-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672204
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672204
    reference: chr 3
allele count: 1
allele frequency: 3.190403266972946e-5
allele num: 31344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.526+40C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.516+40C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.516+40C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.516+40C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1190G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  hgvsc: ENST00000482490.1:n.43+40C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1190G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1190G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1190G>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31729
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9540
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4194
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4705
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

3-64672215-GGGAGAGGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672215
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672207
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 34250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 10386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34183
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4084
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: GGGAGAGGA
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

3-64672236-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672236
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672236
    reference: chr 3
allele count: 1
allele frequency: 1.972464397017634e-5
allele num: 50698
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1222C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.526+8G>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  hgvsc: ENST00000482490.1:n.43+8G>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.516+8G>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1222C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1222C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.516+8G>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.516+8G>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1222C>G
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 1.25e1
  variant carriers: 0
hgvs: c.516+8G>C
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-64672262-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672262
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672262
    reference: chr 3
allele count: 2
allele frequency: 2.436825303993957e-5
allele num: 82074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1248G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.498C>T
  hgvsp: ENST00000295903.4:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.508C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1248G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.498C>T
  hgvsp: ENST00000498707.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1248G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  hgvsc: ENST00000482490.1:n.25C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.498C>T
  hgvsp: ENST00000459780.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1248G>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25033
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19687
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile166Ile
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

3-64672264-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672264
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672264
    reference: chr 3
allele count: 1
allele frequency: 1.191809882487546e-5
allele num: 83906
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.506A>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  hgvsc: ENST00000482490.1:n.23A>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.496A>G
  hgvsp: ENSP00000419217.1:p.Ile166Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1250T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1250T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1250T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.496A>G
  hgvsp: ENSP00000418735.1:p.Ile166Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.496A>G
  hgvsp: ENSP00000295903.4:p.Ile166Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1250T>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5840
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile166Val
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

3-64672268-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672268
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672268
    reference: chr 3
allele count: 2
allele frequency: 2.278060004100508e-5
allele num: 87794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1254G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1254G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.492C>G
  hgvsp: ENST00000295903.4:c.492C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  hgvsc: ENST00000482490.1:n.19C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.492C>G
  hgvsp: ENST00000498707.1:c.492C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.502C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1254G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.492C>G
  hgvsp: ENST00000459780.1:c.492C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1254G>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27532
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala164Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

3-64672268-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672268
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672268
    reference: chr 3
allele count: 2
allele frequency: 2.278060004100508e-5
allele num: 87794
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.502C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.492C>A
  hgvsp: ENST00000295903.4:c.492C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1254G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1254G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  hgvsc: ENST00000482490.1:n.19C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.492C>A
  hgvsp: ENST00000498707.1:c.492C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.492C>A
  hgvsp: ENST00000459780.1:c.492C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1254G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1254G>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala164Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

3-64672274-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672274
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672274
    reference: chr 3
allele count: 1
allele frequency: 1.06453192531244e-5
allele num: 93938
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1260G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.486C>G
  hgvsp: ENSP00000295903.4:p.His162Gln
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1260G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.486C>G
  hgvsp: ENSP00000419217.1:p.His162Gln
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1260G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.496C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.486C>G
  hgvsp: ENSP00000418735.1:p.His162Gln
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  hgvsc: ENST00000482490.1:n.13C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1260G>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6563
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1274
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His162Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

3-64672280-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672280
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672280
    reference: chr 3
allele count: 2
allele frequency: 2.005213555243633e-5
allele num: 99740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  hgvsc: ENST00000482490.1:n.7C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.480C>A
  hgvsp: ENST00000459780.1:c.480C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1266G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1266G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.480C>A
  hgvsp: ENST00000498707.1:c.480C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1266G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.480C>A
  hgvsp: ENST00000295903.4:c.480C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1266G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.490C>A
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 2.75e1
  variant carriers: 1
hgvs: p.Ser160Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

3-64672286-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672286
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672286
    reference: chr 3
allele count: 73
allele frequency: 6.960733832980529e-4
allele num: 104874
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1272G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1272G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.474C>T
  hgvsp: ENST00000459780.1:c.474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1272G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.474C>T
  hgvsp: ENST00000498707.1:c.474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000482490
  gene symbol: ADAMTS9
  hgvsc: ENST00000482490.1:n.1C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.474C>T
  hgvsp: ENST00000295903.4:c.474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1272G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.484C>T
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8256
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36022
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 9.75e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37336
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr158Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

3-64672292-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672292
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672292
    reference: chr 3
allele count: 1
allele frequency: 9.198447302095407e-6
allele num: 108714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.468C>G
  hgvsp: ENST00000295903.4:c.468C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1278G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1278G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1278G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.478C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.468C>G
  hgvsp: ENST00000459780.1:c.468C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.468C>G
  hgvsp: ENST00000498707.1:c.468C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1278G>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val156Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

3-64672304-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672304
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672304
    reference: chr 3
allele count: 1
allele frequency: 8.834390515398343e-6
allele num: 113194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1290G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.456C>T
  hgvsp: ENST00000295903.4:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.466C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1290G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.456C>T
  hgvsp: ENST00000498707.1:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1290G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1290G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.456C>T
  hgvsp: ENST00000459780.1:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4352
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr152Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

3-64672312-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672312
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672312
    reference: chr 3
allele count: 1
allele frequency: 8.67995278105687e-6
allele num: 115208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.448T>C
  hgvsp: ENSP00000295903.4:p.Cys150Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.448T>C
  hgvsp: ENSP00000418735.1:p.Cys150Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.458T>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1298A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1298A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1298A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.448T>C
  hgvsp: ENSP00000419217.1:p.Cys150Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1298A>G
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5513
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys150Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

3-64672318-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672318
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672318
    reference: chr 3
allele count: 1
allele frequency: 8.575740944017563e-6
allele num: 116608
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1304T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.442A>G
  hgvsp: ENSP00000419217.1:p.Lys148Glu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.452A>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1304T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.442A>G
  hgvsp: ENSP00000418735.1:p.Lys148Glu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1304T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.442A>G
  hgvsp: ENSP00000295903.4:p.Lys148Glu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1304T>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43179
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5753
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys148Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

3-64672323-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672323
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672323
    reference: chr 3
allele count: 1
allele frequency: 8.506149946411256e-6
allele num: 117562
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1309T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1309T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.447A>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1309T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.437A>G
  hgvsp: ENSP00000295903.4:p.Glu146Gly
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.437A>G
  hgvsp: ENSP00000419217.1:p.Glu146Gly
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.437A>G
  hgvsp: ENSP00000418735.1:p.Glu146Gly
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1309T>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu146Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

3-64672333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672333
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672333
    reference: chr 3
allele count: 1
allele frequency: 8.384338056510439e-6
allele num: 119270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.437G>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.427G>A
  hgvsp: ENSP00000295903.4:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.427G>A
  hgvsp: ENSP00000419217.1:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.427G>A
  hgvsp: ENSP00000418735.1:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1319C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1319C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1319C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1319C>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44993
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu143Lys
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ

3-64672338-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672338
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672338
    reference: chr 3
allele count: 1
allele frequency: 8.342927700188551e-6
allele num: 119862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1324G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.422C>A
  hgvsp: ENSP00000418735.1:p.Ser141Tyr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1324G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1324G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.422C>A
  hgvsp: ENSP00000295903.4:p.Ser141Tyr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.422C>A
  hgvsp: ENSP00000419217.1:p.Ser141Tyr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.432C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1324G>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12674
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45353
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6274
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser141Tyr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

3-64672353-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672353
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672353
    reference: chr 3
allele count: 2
allele frequency: 1.656616526406467e-5
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.407A>T
  hgvsp: ENSP00000295903.4:p.Gln136Leu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1339T>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1339T>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.407A>T
  hgvsp: ENSP00000419217.1:p.Gln136Leu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1339T>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1339T>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.407A>T
  hgvsp: ENSP00000418735.1:p.Gln136Leu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.417A>T
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln136Leu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

3-64672354-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672354
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672354
    reference: chr 3
allele count: 1
allele frequency: 8.279927799029592e-6
allele num: 120774
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1340G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1340G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.406C>G
  hgvsp: ENSP00000419217.1:p.Gln136Glu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.416C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1340G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.406C>G
  hgvsp: ENSP00000418735.1:p.Gln136Glu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.406C>G
  hgvsp: ENSP00000295903.4:p.Gln136Glu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1340G>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2035
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln136Glu
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

3-64672358-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672358
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672358
    reference: chr 3
allele count: 1
allele frequency: 8.271161767381846e-6
allele num: 120902
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1344C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1344C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.402G>A
  hgvsp: ENST00000498707.1:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.412G>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.402G>A
  hgvsp: ENST00000459780.1:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1344C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.402G>A
  hgvsp: ENST00000295903.4:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1344C>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46245
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val134Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

3-64672363-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672363
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672363
    reference: chr 3
allele count: 2
allele frequency: 1.65218253312626e-5
allele num: 121052
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.397G>C
  hgvsp: ENSP00000418735.1:p.Gly133Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1349C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1349C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.407G>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.397G>C
  hgvsp: ENSP00000419217.1:p.Gly133Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1349C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.397G>C
  hgvsp: ENSP00000295903.4:p.Gly133Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1349C>G
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly133Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

3-64672363-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672363
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672363
    reference: chr 3
allele count: 8
allele frequency: 6.608730132505039e-5
allele num: 121052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.397G>A
  hgvsp: ENSP00000419217.1:p.Gly133Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.407G>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1349C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.397G>A
  hgvsp: ENSP00000418735.1:p.Gly133Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.397G>A
  hgvsp: ENSP00000295903.4:p.Gly133Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1349C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1349C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1349C>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40805
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6507
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly133Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

3-64672368-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672368
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672368
    reference: chr 3
allele count: 10
allele frequency: 8.254366559910193e-5
allele num: 121148
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.392C>A
  hgvsp: ENSP00000418735.1:p.Thr131Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.392C>A
  hgvsp: ENSP00000295903.4:p.Thr131Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.392C>A
  hgvsp: ENSP00000419217.1:p.Thr131Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1354G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1354G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1354G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.402C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1354G>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4140
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46450
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr131Lys
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

3-64672380-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672380
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672380
    reference: chr 3
allele count: 53
allele frequency: 4.370629370629371e-4
allele num: 121264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.380C>T
  hgvsp: ENSP00000419217.1:p.Thr127Ile
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.390C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1366G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.380C>T
  hgvsp: ENSP00000418735.1:p.Thr127Ile
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1366G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1366G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.380C>T
  hgvsp: ENSP00000295903.4:p.Thr127Ile
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1366G>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 9.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr127Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

3-64672386-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672386
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672386
    reference: chr 3
allele count: 3
allele frequency: 2.473533194815474e-5
allele num: 121284
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.374C>T
  hgvsp: ENSP00000418735.1:p.Thr125Ile
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1372G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.374C>T
  hgvsp: ENSP00000419217.1:p.Thr125Ile
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1372G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1372G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.374C>T
  hgvsp: ENSP00000295903.4:p.Thr125Ile
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1372G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.384C>T
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr125Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

3-64672388-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672388
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672388
    reference: chr 3
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1374G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1374G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.372C>A
  hgvsp: ENSP00000419217.1:p.Phe124Leu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1374G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1374G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.372C>A
  hgvsp: ENSP00000418735.1:p.Phe124Leu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.372C>A
  hgvsp: ENSP00000295903.4:p.Phe124Leu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.382C>A
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe124Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

3-64672394-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672394
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672394
    reference: chr 3
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1380T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.366A>G
  hgvsp: ENST00000295903.4:c.366A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1380T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1380T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.376A>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.366A>G
  hgvsp: ENST00000459780.1:c.366A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.366A>G
  hgvsp: ENST00000498707.1:c.366A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1380T>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6635
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro122Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

3-64672397-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672397
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672397
    reference: chr 3
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.363T>C
  hgvsp: ENST00000295903.4:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1383A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.363T>C
  hgvsp: ENST00000459780.1:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.373T>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1383A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1383A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1383A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.363T>C
  hgvsp: ENST00000498707.1:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2109
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala121Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

3-64672398-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672398
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672398
    reference: chr 3
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.362C>G
  hgvsp: ENSP00000295903.4:p.Ala121Gly
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.372C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1384G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1384G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.362C>G
  hgvsp: ENSP00000419217.1:p.Ala121Gly
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1384G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1384G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.362C>G
  hgvsp: ENSP00000418735.1:p.Ala121Gly
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala121Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

3-64672398-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672398
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672398
    reference: chr 3
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.362C>T
  hgvsp: ENSP00000295903.4:p.Ala121Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.362C>T
  hgvsp: ENSP00000419217.1:p.Ala121Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1384G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1384G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.372C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.362C>T
  hgvsp: ENSP00000418735.1:p.Ala121Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1384G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1384G>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala121Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

3-64672409-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672409
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672409
    reference: chr 3
allele count: 24
allele frequency: 1.978598163201372e-4
allele num: 121298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1395G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1395G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.351C>T
  hgvsp: ENST00000459780.1:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1395G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.351C>T
  hgvsp: ENST00000295903.4:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.351C>T
  hgvsp: ENST00000498707.1:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1395G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.361C>T
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala117Ala
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

3-64672413-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672413
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672413
    reference: chr 3
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1399T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.347A>G
  hgvsp: ENSP00000418735.1:p.Asn116Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1399T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1399T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1399T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.347A>G
  hgvsp: ENSP00000419217.1:p.Asn116Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.347A>G
  hgvsp: ENSP00000295903.4:p.Asn116Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.357A>G
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6499
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn116Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

3-64672416-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672416
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672416
    reference: chr 3
allele count: 2
allele frequency: 1.648913366091746e-5
allele num: 121292
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.344C>T
  hgvsp: ENSP00000418735.1:p.Ala115Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.354C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1402G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.344C>T
  hgvsp: ENSP00000419217.1:p.Ala115Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1402G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.344C>T
  hgvsp: ENSP00000295903.4:p.Ala115Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1402G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1402G>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45685
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala115Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

3-64672425-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672425
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672425
    reference: chr 3
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.345A>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1411T>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.335A>C
  hgvsp: ENSP00000295903.4:p.Asn112Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.335A>C
  hgvsp: ENSP00000419217.1:p.Asn112Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1411T>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1411T>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1411T>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.335A>C
  hgvsp: ENSP00000418735.1:p.Asn112Thr
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2065
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn112Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

3-64672430-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672430
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672430
    reference: chr 3
allele count: 2
allele frequency: 1.649130908011478e-5
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1416T>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.330A>T
  hgvsp: ENST00000498707.1:c.330A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1416T>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.340A>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.330A>T
  hgvsp: ENST00000459780.1:c.330A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.330A>T
  hgvsp: ENST00000295903.4:c.330A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1416T>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1416T>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu110Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

3-64672436-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672436
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672436
    reference: chr 3
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1422C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1422C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1422C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.324G>A
  hgvsp: ENST00000498707.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.324G>A
  hgvsp: ENST00000295903.4:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.334G>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.324G>A
  hgvsp: ENST00000459780.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1422C>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln108Gln
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

3-64672444-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672444
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672444
    reference: chr 3
allele count: 2
allele frequency: 1.649375711293276e-5
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1430C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1430C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.316G>C
  hgvsp: ENSP00000295903.4:p.Gly106Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1430C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.316G>C
  hgvsp: ENSP00000419217.1:p.Gly106Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.316G>C
  hgvsp: ENSP00000418735.1:p.Gly106Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.326G>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1430C>G
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly106Arg
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-64672444-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672444
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672444
    reference: chr 3
allele count: 2
allele frequency: 1.649375711293276e-5
allele num: 121258
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.316G>A
  hgvsp: ENSP00000418735.1:p.Gly106Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1430C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.316G>A
  hgvsp: ENSP00000295903.4:p.Gly106Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.326G>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.316G>A
  hgvsp: ENSP00000419217.1:p.Gly106Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1430C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1430C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1430C>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6546
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45043
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly106Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

3-64672466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672466
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672466
    reference: chr 3
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.294G>A
  hgvsp: ENST00000295903.4:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.294G>A
  hgvsp: ENST00000498707.1:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.294G>A
  hgvsp: ENST00000459780.1:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1452C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1452C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1452C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1452C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.304G>A
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2120
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6500
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala98Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-64672466-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672466
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672466
    reference: chr 3
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.294G>C
  hgvsp: ENST00000459780.1:c.294G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1452C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.294G>C
  hgvsp: ENST00000498707.1:c.294G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.304G>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.294G>C
  hgvsp: ENST00000295903.4:c.294G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1452C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1452C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1452C>G
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala98Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

3-64672467-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672467
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672467
    reference: chr 3
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.293C>A
  hgvsp: ENSP00000418735.1:p.Ala98Glu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.293C>A
  hgvsp: ENSP00000419217.1:p.Ala98Glu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1453G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.293C>A
  hgvsp: ENSP00000295903.4:p.Ala98Glu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.303C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1453G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1453G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1453G>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6644
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala98Glu
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

3-64672474-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672474
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672474
    reference: chr 3
allele count: 9499
allele frequency: 7.86106789367407e-2
allele num: 120836
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1460A>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.286T>A
  hgvsp: ENSP00000418735.1:p.Ser96Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.286T>A
  hgvsp: ENSP00000419217.1:p.Ser96Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.286T>A
  hgvsp: ENSP00000295903.4:p.Ser96Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1460A>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1460A>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.296T>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1460A>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13466
  bin: 2.75e1
  variant carriers: 976
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 3.75e1
  variant carriers: 1317
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 9.75e1
  variant carriers: 748
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 255
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.25e1
  variant carriers: 463
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5467
  bin: 3.25e1
  variant carriers: 1305
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 4.75e1
  variant carriers: 750
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.75e1
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 5.75e1
  variant carriers: 381
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 31855
  bin: 2.25e1
  variant carriers: 530
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.25e1
  variant carriers: 1012
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 8.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1807
  bin: 7.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 7.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 36097
  bin: 6.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 5.25e1
  variant carriers: 9
hgvs: p.Ser96Thr
num of homozygotes: 658
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

3-64672481-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672481
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672481
    reference: chr 3
allele count: 4
allele frequency: 3.302019184731463e-5
allele num: 121138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.289T>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.279T>C
  hgvsp: ENST00000498707.1:c.279T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1467A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.279T>C
  hgvsp: ENST00000295903.4:c.279T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1467A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.279T>C
  hgvsp: ENST00000459780.1:c.279T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1467A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1467A>G
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31485
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15571
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6898
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser93Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

3-64672484-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672484
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672484
    reference: chr 3
allele count: 6
allele frequency: 4.950821836424846e-5
allele num: 121192
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1470G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.276C>T
  hgvsp: ENST00000459780.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.276C>T
  hgvsp: ENST00000498707.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1470G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.276C>T
  hgvsp: ENST00000295903.4:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1470G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.286C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1470G>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15645
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6331
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6968
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2417
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser92Ser
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

3-64672488-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672488
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672488
    reference: chr 3
allele count: 4
allele frequency: 3.300929211573058e-5
allele num: 121178
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1474G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1474G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1474G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.272C>G
  hgvsp: ENSP00000419217.1:p.Ser91Cys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1474G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.272C>G
  hgvsp: ENSP00000418735.1:p.Ser91Cys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.272C>G
  hgvsp: ENSP00000295903.4:p.Ser91Cys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.282C>G
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15765
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser91Cys
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

3-64672490-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672490
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672490
    reference: chr 3
allele count: 7
allele frequency: 5.777579689331286e-5
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1476A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.280T>C
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1476A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.270T>C
  hgvsp: ENST00000459780.1:c.270T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.270T>C
  hgvsp: ENST00000498707.1:c.270T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1476A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.270T>C
  hgvsp: ENST00000295903.4:c.270T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1476A>G
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15778
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6423
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31397
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40015
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser90Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-64672496-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672496
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672496
    reference: chr 3
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.264C>T
  hgvsp: ENST00000295903.4:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1482G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1482G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.264C>T
  hgvsp: ENST00000498707.1:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1482G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.264C>T
  hgvsp: ENST00000459780.1:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.274C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1482G>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15733
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser88Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum

3-64672497-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672497
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672497
    reference: chr 3
allele count: 2
allele frequency: 1.650355651642929e-5
allele num: 121186
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1483G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1483G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1483G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.273C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.263C>T
  hgvsp: ENSP00000295903.4:p.Ser88Phe
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1483G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.263C>T
  hgvsp: ENSP00000418735.1:p.Ser88Phe
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.263C>T
  hgvsp: ENSP00000419217.1:p.Ser88Phe
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7133
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2688
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39315
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2595
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser88Phe
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

3-64672497-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672497
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672497
    reference: chr 3
allele count: 1
allele frequency: 8.251778258214646e-6
allele num: 121186
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1483G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.273C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.263C>G
  hgvsp: ENSP00000419217.1:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.263C>G
  hgvsp: ENSP00000295903.4:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1483G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.263C>G
  hgvsp: ENSP00000418735.1:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1483G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1483G>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2688
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser88Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/3-64672498-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672498
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672498
    reference: chr 3
allele count: 5
allele frequency: 4.127387693780853e-5
allele num: 121142
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.262T>G
  hgvsp: ENSP00000295903.4:p.Ser88Ala
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.272T>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1484A>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.262T>G
  hgvsp: ENSP00000419217.1:p.Ser88Ala
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1484A>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1484A>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.262T>G
  hgvsp: ENSP00000418735.1:p.Ser88Ala
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1484A>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7007
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser88Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-64672501-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672501
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672501
    reference: chr 3
allele count: 363
allele frequency: 2.998513133983149e-3
allele num: 121060
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1487C>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1487C>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.259G>T
  hgvsp: ENSP00000418735.1:p.Ala87Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.259G>T
  hgvsp: ENSP00000419217.1:p.Ala87Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.259G>T
  hgvsp: ENSP00000295903.4:p.Ala87Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1487C>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.269G>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1487C>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 30649
  bin: 2.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 4.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 15708
  bin: 2.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 3.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 3.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38331
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala87Ser
num of homozygotes: 7
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

3-64672507-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672507
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672507
    reference: chr 3
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.253G>C
  hgvsp: ENSP00000295903.4:p.Ala85Pro
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.253G>C
  hgvsp: ENSP00000419217.1:p.Ala85Pro
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1493C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.253G>C
  hgvsp: ENSP00000418735.1:p.Ala85Pro
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1493C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1493C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1493C>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.263G>C
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6904
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38600
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala85Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

3-64672507-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672507
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672507
    reference: chr 3
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.253G>A
  hgvsp: ENSP00000419217.1:p.Ala85Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.253G>A
  hgvsp: ENSP00000295903.4:p.Ala85Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1493C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.263G>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.253G>A
  hgvsp: ENSP00000418735.1:p.Ala85Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1493C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1493C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1493C>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38600
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala85Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-64672513-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672513
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672513
    reference: chr 3
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.247T>C
  hgvsp: ENSP00000418735.1:p.Trp83Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.247T>C
  hgvsp: ENSP00000295903.4:p.Trp83Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1499A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1499A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1499A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.247T>C
  hgvsp: ENSP00000419217.1:p.Trp83Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1499A>G
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.257T>C
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38794
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Trp83Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-64672517-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672517
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672517
    reference: chr 3
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.243C>T
  hgvsp: ENST00000295903.4:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.253C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1503G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.243C>T
  hgvsp: ENST00000459780.1:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1503G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1503G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1503G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.243C>T
  hgvsp: ENST00000498707.1:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7190
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2811
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp81Asp
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/3-64672525-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672525
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672525
    reference: chr 3
allele count: 1
allele frequency: 8.250552787036732e-6
allele num: 121204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1511C>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.235G>T
  hgvsp: ENSP00000295903.4:p.Ala79Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.235G>T
  hgvsp: ENSP00000418735.1:p.Ala79Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.235G>T
  hgvsp: ENSP00000419217.1:p.Ala79Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1511C>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1511C>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.245G>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1511C>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala79Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

3-64672525-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672525
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672525
    reference: chr 3
allele count: 1
allele frequency: 8.250552787036732e-6
allele num: 121204
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1511C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.235G>A
  hgvsp: ENSP00000419217.1:p.Ala79Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1511C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1511C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.245G>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.235G>A
  hgvsp: ENSP00000418735.1:p.Ala79Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.235G>A
  hgvsp: ENSP00000295903.4:p.Ala79Thr
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1511C>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala79Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

3-64672529-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672529
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672529
    reference: chr 3
allele count: 2
allele frequency: 1.649538953862396e-5
allele num: 121246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1515G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1515G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.231C>G
  hgvsp: ENSP00000418735.1:p.Asn77Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1515G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.231C>G
  hgvsp: ENSP00000295903.4:p.Asn77Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.231C>G
  hgvsp: ENSP00000419217.1:p.Asn77Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.241C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1515G>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2912
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn77Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-64672533-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672533
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672533
    reference: chr 3
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1519A>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.237T>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.227T>G
  hgvsp: ENSP00000295903.4:p.Ile76Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1519A>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1519A>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.227T>G
  hgvsp: ENSP00000419217.1:p.Ile76Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.227T>G
  hgvsp: ENSP00000418735.1:p.Ile76Ser
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1519A>C
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2928
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile76Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

3-64672534-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672534
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672534
    reference: chr 3
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1520T>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.226A>T
  hgvsp: ENSP00000419217.1:p.Ile76Phe
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.226A>T
  hgvsp: ENSP00000295903.4:p.Ile76Phe
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1520T>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1520T>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.236A>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.226A>T
  hgvsp: ENSP00000418735.1:p.Ile76Phe
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1520T>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39175
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7580
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile76Phe
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

3-64672534-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672534
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672534
    reference: chr 3
allele count: 248
allele frequency: 2.044854881266491e-3
allele num: 121280
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.226A>G
  hgvsp: ENSP00000418735.1:p.Ile76Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.226A>G
  hgvsp: ENSP00000295903.4:p.Ile76Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1520T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1520T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1520T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.226A>G
  hgvsp: ENSP00000419217.1:p.Ile76Val
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1520T>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.236A>G
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 3.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 4.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 29826
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16311
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2899
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile76Val
num of homozygotes: 4
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

3-64672538-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672538
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672538
    reference: chr 3
allele count: 3
allele frequency: 2.473696362017217e-5
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1524C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1524C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.222G>A
  hgvsp: ENST00000295903.4:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.222G>A
  hgvsp: ENST00000459780.1:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.232G>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1524C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.222G>A
  hgvsp: ENST00000498707.1:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1524C>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29741
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2964
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg74Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum

3-64672545-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672545
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672545
    reference: chr 3
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.215C>G
  hgvsp: ENSP00000418735.1:p.Thr72Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.215C>G
  hgvsp: ENSP00000295903.4:p.Thr72Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.215C>G
  hgvsp: ENSP00000419217.1:p.Thr72Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1531G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1531G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1531G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1531G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.225C>G
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2840
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr72Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/3-64672561-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672561
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672561
    reference: chr 3
allele count: 10
allele frequency: 8.239404126293587e-5
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.199G>T
  hgvsp: ENSP00000419217.1:p.Val67Phe
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.209G>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.199G>T
  hgvsp: ENSP00000418735.1:p.Val67Phe
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1547C>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1547C>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1547C>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.199G>T
  hgvsp: ENSP00000295903.4:p.Val67Phe
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1547C>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29574
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3027
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val67Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-64672562-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672562
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672562
    reference: chr 3
allele count: 3
allele frequency: 2.471699045924168e-5
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.198C>T
  hgvsp: ENST00000459780.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.198C>T
  hgvsp: ENST00000295903.4:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1548G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1548G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.198C>T
  hgvsp: ENST00000498707.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.208C>T
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1548G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1548G>A
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3061
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1900
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn66Asn
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

3-64672562-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672562
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672562
    reference: chr 3
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1548G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.198C>A
  hgvsp: ENSP00000295903.4:p.Asn66Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.198C>A
  hgvsp: ENSP00000418735.1:p.Asn66Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.198C>A
  hgvsp: ENSP00000419217.1:p.Asn66Lys
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.208C>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1548G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1548G>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1548G>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3029
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7807
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn66Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD

3-64672565-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672565
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672565
    reference: chr 3
allele count: 5
allele frequency: 4.119566292060772e-5
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1551C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1551C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1551C>T
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.195G>A
  hgvsp: ENST00000295903.4:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.195G>A
  hgvsp: ENST00000498707.1:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.195G>A
  hgvsp: ENST00000459780.1:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.205G>A
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1551C>T
  variant of: http://identifiers.org/hgnc/42435
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7987
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40234
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3070
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7811
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr65Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

3-64672566-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672566
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672566
    reference: chr 3
allele count: 29
allele frequency: 2.389309077726696e-4
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.194C>G
  hgvsp: ENSP00000419217.1:p.Thr65Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1552G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1552G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1552G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.194C>G
  hgvsp: ENSP00000418735.1:p.Thr65Arg
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1552G>C
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.204C>G
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.194C>G
  hgvsp: ENSP00000295903.4:p.Thr65Arg
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16909
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29516
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3028
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr65Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-64672569-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64672569
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 64672569
    reference: chr 3
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000460833
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000460833.1:n.430+1555G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000485174
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000485174.1:n.235+1555G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000481312
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000481312.1:n.211+1555G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000418735
  ensembl transcript: ENST00000498707
  gene symbol: ADAMTS9
  hgvsc: ENST00000498707.1:c.191C>T
  hgvsp: ENSP00000418735.1:p.Pro64Leu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000419217
  ensembl transcript: ENST00000459780
  gene symbol: ADAMTS9
  hgvsc: ENST00000459780.1:c.191C>T
  hgvsp: ENSP00000419217.1:p.Pro64Leu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163638
  ensembl protein: ENSP00000295903
  ensembl transcript: ENST00000295903
  gene symbol: ADAMTS9
  hgvsc: ENST00000295903.4:c.191C>T
  hgvsp: ENSP00000295903.4:p.Pro64Leu
  variant of: http://identifiers.org/hgnc/13202
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000241684
  ensembl transcript: ENST00000474768
  gene symbol: ADAMTS9-AS2
  hgvsc: ENST00000474768.1:n.235+1555G>A
  variant of: http://identifiers.org/hgnc/42435
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163638
  ensembl transcript: ENST00000475557
  gene symbol: ADAMTS9
  hgvsc: ENST00000475557.1:n.201C>T
  variant of: http://identifiers.org/hgnc/13202
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro64Leu
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 382
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2089
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3691
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20658
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1098
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3760
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.24e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.728e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

QD
type: SiteQuality
SIO_000300: 1.059e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.60875e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeQuality
all individuals: 154
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11196
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 213
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5985
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3184
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.944444444444445e-4
allele num: 1440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1098
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3712
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.635e0

MQ
type: SiteQuality
SIO_000300: 5.34e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.134e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.66e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.64889e5

VQSLOD
type: SiteQuality
SIO_000300: -9.857e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

GenotypeQuality
all individuals: 2532
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3455
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25471
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10591
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3911
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18382
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.426735218508997e-4
allele num: 1556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

DP
type: SiteQuality
SIO_000300: 5.81872e5

QD
type: SiteQuality
SIO_000300: 1.493e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.16e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
all individuals: 7714
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3663
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30577
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1812
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

DP
type: SiteQuality
SIO_000300: 6.24932e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
SIO_000300: 7.06e0

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

FS
type: SiteQuality
SIO_000300: 3.245e0

MQ
type: SiteQuality
SIO_000300: 4.824e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

GenotypeQuality
all individuals: 369
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32400
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4006
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9106
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2317
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4076
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.479955456570156e-5
allele num: 28736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4036
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6802
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

VQSLOD
type: SiteQuality
SIO_000300: 5.9e-2

QD
type: SiteQuality
SIO_000300: 1.17e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.67173e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.55e-1

GenotypeQuality
all individuals: 182
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2451
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1523
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2486
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24255
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.34291670285764e-5
allele num: 46052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.786e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.796e0

VQSLOD
type: SiteQuality
SIO_000300: -1.205e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.29e0

DP
type: SiteQuality
SIO_000300: 1.055173e6

MQRankSum
type: SiteQuality
SIO_000300: 4.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.79e-1

MQ
type: SiteQuality
SIO_000300: 5.863e1

QD
type: SiteQuality
SIO_000300: 1.083e1

GenotypeQuality
all individuals: 1271
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18865
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7448
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.450536698578474e-4
allele num: 6894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3822
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.197e1

MQRankSum
type: SiteQuality
SIO_000300: -4.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.02e-1

FS
type: SiteQuality
SIO_000300: 3.608e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

DP
type: SiteQuality
SIO_000300: 1.071295e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

GenotypeQuality
all individuals: 141
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16956
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2053
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.030539311241066e-5
allele num: 49248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7356
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.200754469411185e-5
allele num: 12194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4054
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.419e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.59e-1

QD
type: SiteQuality
SIO_000300: 1.081e1

FS
type: SiteQuality
SIO_000300: 1.2075e1

DP
type: SiteQuality
SIO_000300: 1.111296e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

GenotypeQuality
all individuals: 628
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 180
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.5e0
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GenotypeQuality
all individuals: 16956
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.030539311241066e-5
allele num: 49248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12194
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.359434475258292e-4
allele num: 7356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7702
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.419e0

FS
type: SiteQuality
SIO_000300: 1.2075e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.081e1

DP
type: SiteQuality
SIO_000300: 1.111296e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

GenotypeQuality
all individuals: 658
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1748
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 618
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GenotypeQuality
all individuals: 14010
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 488
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variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.900996121967911e-5
allele num: 52604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6968
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8108
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13010
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.026e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 1.705e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.170676e6

QD
type: SiteQuality
SIO_000300: 1.315e1

GenotypeQuality
all individuals: 150
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1114
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variant carriers: 0

GenotypeQuality
all individuals: 1139
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 230
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variant carriers: 0

GenotypeQuality
all individuals: 518
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GenotypeQuality
all individuals: 251
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34258
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4986
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.146000458400183e-4
allele num: 8726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.789741203421985e-5
allele num: 55874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7314
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.232122e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.12e0

VQSLOD
type: SiteQuality
SIO_000300: -1.088e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

GenotypeQuality
all individuals: 4389
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
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variant carriers: 0

GenotypeQuality
all individuals: 510
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variant carriers: 0

GenotypeQuality
all individuals: 1307
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variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 796
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variant carriers: 0

GenotypeQuality
all individuals: 1025
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variant carriers: 0

GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 111
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variant carriers: 0

GenotypeQuality
all individuals: 280
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variant carriers: 0

GenotypeQuality
all individuals: 623
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variant carriers: 0

GenotypeQuality
all individuals: 8555
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.53447452772284e-4
allele num: 58652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7638
num of homozygotes: 0

African
type: Population
allele count: 60
allele frequency: 6.852444038373686e-3
allele num: 8756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.252604720391239e-4
allele num: 9406
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.28665e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.86e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.63e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.64e-1

FS
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.276e1

GenotypeQuality
all individuals: 326
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6593
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 844
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variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 39625
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variant carriers: 0

GenotypeQuality
all individuals: 287
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variant carriers: 0

GenotypeQuality
all individuals: 385
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1263
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60744
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.802721088435374e-5
allele num: 14700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5674
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.818e1

VQSLOD
type: SiteQuality
SIO_000300: -7.177e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.72e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

DP
type: SiteQuality
SIO_000300: 1.326852e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

GenotypeQuality
all individuals: 536
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5234
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
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variant carriers: 0

GenotypeQuality
all individuals: 1641
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variant carriers: 0

GenotypeQuality
all individuals: 628
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GenotypeQuality
all individuals: 1609
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GenotypeQuality
all individuals: 1039
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variant carriers: 0

GenotypeQuality
all individuals: 327
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GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 40645
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variant carriers: 0

GenotypeQuality
all individuals: 841
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variant carriers: 0

GenotypeQuality
all individuals: 42
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GenotypeQuality
all individuals: 1284
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.579813133307015e-5
allele num: 15198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.892e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.9632e1

DP
type: SiteQuality
SIO_000300: 1.379044e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

QD
type: SiteQuality
SIO_000300: 1.431e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.147e0

MQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.92e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1290
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 333
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GenotypeQuality
all individuals: 1729
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GenotypeQuality
all individuals: 890
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42195
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6156
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.047998323202683e-4
allele num: 9542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64094
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.074e0

QD
type: SiteQuality
SIO_000300: 1.296e1

MQRankSum
type: SiteQuality
SIO_000300: -5.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.114e0

FS
type: SiteQuality
SIO_000300: 5.957e0

VQSLOD
type: SiteQuality
SIO_000300: 9.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 1.40259e6

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 411
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 926
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 413
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variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.379178361826996e-5
allele num: 15676
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.147e0

MQRankSum
type: SiteQuality
SIO_000300: 5.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.088e0

QD
type: SiteQuality
SIO_000300: 1.292e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.420943e6

GenotypeQuality
all individuals: 316
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2058
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1885
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GenotypeQuality
all individuals: 1299
bin: 9.75e1
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GenotypeQuality
all individuals: 1834
bin: 7.75e1
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GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65204
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15822
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.028530155290719e-5
allele num: 11076
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

DP
type: SiteQuality
SIO_000300: 1.433336e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

FS
type: SiteQuality
SIO_000300: 2.638e0

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.067e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51666818333485e-5
allele num: 65934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.891e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.937e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

DP
type: SiteQuality
SIO_000300: 1.457866e6

VQSLOD
type: SiteQuality
SIO_000300: 7.199999999999999e-2

FS
type: SiteQuality
SIO_000300: 1.309e0

QD
type: SiteQuality
SIO_000300: 9.470000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1996
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511167528032158e-5
allele num: 66174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.822e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.13e-1

FS
type: SiteQuality
SIO_000300: 1.904e0

DP
type: SiteQuality
SIO_000300: 1.467242e6

QD
type: SiteQuality
SIO_000300: 1.037e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1054
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GenotypeQuality
all individuals: 8
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314279102059708e-4
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

QD
type: SiteQuality
SIO_000300: 1.372e1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.05e-1

DP
type: SiteQuality
SIO_000300: 1.480453e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.519756838905775e-4
allele num: 6580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.33e0

MQ
type: SiteQuality
SIO_000300: 5.841e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.434e1

VQSLOD
type: SiteQuality
SIO_000300: -3.269e0

FS
type: SiteQuality
SIO_000300: 2.514e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.197e0

DP
type: SiteQuality
SIO_000300: 1.481256e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.141e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.525e0

VQSLOD
type: SiteQuality
SIO_000300: -4.05e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.570000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

FS
type: SiteQuality
SIO_000300: 2.256e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.38e-1

DP
type: SiteQuality
SIO_000300: 1.483353e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.179e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002552169343942e-5
allele num: 66610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.137e1

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.548e0

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.857906242409522e-4
allele num: 16468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
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QD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.669309611293754e-4
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
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MQRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.08e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 34
allele frequency: 5.154639175257732e-3
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.549260714392826e-4
allele num: 66686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.492557e6

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.853e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.74e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.244e1

GenotypeQuality
all individuals: 362
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818181818181818e-4
allele num: 16500
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.01e-1

MQ
type: SiteQuality
SIO_000300: 5.878e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.82e0

FS
type: SiteQuality
SIO_000300: 4.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.878e-1

QD
type: SiteQuality
SIO_000300: 1.075e1

DP
type: SiteQuality
SIO_000300: 1.492093e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

FS
type: SiteQuality
SIO_000300: 1.617e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.651e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-1

DP
type: SiteQuality
SIO_000300: 1.492135e6

MQ
type: SiteQuality
SIO_000300: 5.94e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-2

QD
type: SiteQuality
SIO_000300: 9.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2107
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.858e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.48e-1

FS
type: SiteQuality
SIO_000300: 3.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.031e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: -2.39e0

QD
type: SiteQuality
SIO_000300: 3.18e0

DP
type: SiteQuality
SIO_000300: 1.492208e6

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 6630
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2081
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.492503e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.014e0

QD
type: SiteQuality
SIO_000300: 1.351e1

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 6.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.5e-1

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.86e-1

FS
type: SiteQuality
SIO_000300: 6.521e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.492531e6

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.07e-1

FS
type: SiteQuality
SIO_000300: 6.521e0

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.86e-1

DP
type: SiteQuality
SIO_000300: 1.492531e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 24

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 24
allele frequency: 2.078641953923437e-3
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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VQSLOD
type: SiteQuality
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FS
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QD
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BaseQRankSum
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.492905e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele num: 8652
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
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FS
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.493918e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.308e1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 4.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.884e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.88e0

VQSLOD
type: SiteQuality
SIO_000300: -6.26e-1

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.589e-1

FS
type: SiteQuality
SIO_000300: 1.814e0

QD
type: SiteQuality
SIO_000300: 1.155e1

DP
type: SiteQuality
SIO_000300: 1.49155e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-2

MQ
type: SiteQuality
SIO_000300: 5.834e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.4917e6

QD
type: SiteQuality
SIO_000300: 1.362e1

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.32e0

FS
type: SiteQuality
SIO_000300: 2.999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.95e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.41e-1

DP
type: SiteQuality
SIO_000300: 1.492063e6

FS
type: SiteQuality
SIO_000300: 7.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

QD
type: SiteQuality
SIO_000300: 1.255e1

MQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.901e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 45043
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variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92492781520693e-4
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 1.385e1

FS
type: SiteQuality
SIO_000300: 1.499e0

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

DP
type: SiteQuality
SIO_000300: 1.494303e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2097
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312673450508788e-4
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.385e1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.85e-1

FS
type: SiteQuality
SIO_000300: 1.499e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.494303e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.3e0

DP
type: SiteQuality
SIO_000300: 1.506025e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-2

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.232e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.506025e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.505253e6

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 26

GenotypeQuality
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variant carriers: 22

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 60
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 319
bin: 9.25e1
variant carriers: 33

GenotypeQuality
all individuals: 499
bin: 3.75e1
variant carriers: 8

GenotypeQuality
all individuals: 650
bin: 4.75e1
variant carriers: 11

GenotypeQuality
all individuals: 9681
bin: 9.75e1
variant carriers: 8570

GenotypeQuality
all individuals: 5474
bin: 6.75e1
variant carriers: 33

Latino
type: Population
allele count: 2447
allele frequency: 2.127826086956522e-1
allele num: 11500
num of homozygotes: 262

Other
type: Population
allele count: 68
allele frequency: 7.505518763796909e-2
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2485
allele frequency: 3.745177236556547e-2
allele num: 66352
num of homozygotes: 60

East Asian
type: Population
allele count: 675
allele frequency: 7.825179689311385e-2
allele num: 8626
num of homozygotes: 20

South Asian
type: Population
allele count: 1088
allele frequency: 6.593140225427221e-2
allele num: 16502
num of homozygotes: 50

African
type: Population
allele count: 2310
allele frequency: 2.231021827313116e-1
allele num: 10354
num of homozygotes: 256

European (Finnish)
type: Population
allele count: 426
allele frequency: 6.458459672528806e-2
allele num: 6596
num of homozygotes: 10

BaseQRankSum
type: SiteQuality
SIO_000300: -1.028e0

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

FS
type: SiteQuality
SIO_000300: 1.114e0

VQSLOD
type: SiteQuality
SIO_000300: 4.65e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 1.720429e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.87e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2664
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 469
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1209
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37937
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2391
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.006186371963122e-5
allele num: 66598
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.79e-1

QD
type: SiteQuality
SIO_000300: 1.181e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.588733e6

GenotypeQuality
all individuals: 471
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1489
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 340
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.635482307319437e-4
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.589595e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.579e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

GenotypeQuality
all individuals: 2482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7041
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39938
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 140
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.855050115651503e-4
allele num: 10376
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e-1

DP
type: SiteQuality
SIO_000300: 1.592274e6

MQ
type: SiteQuality
SIO_000300: 5.989e1

FS
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.599e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

GenotypeQuality
all individuals: 450
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2508
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7057
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.073225750477182e-4
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.64e-1

DP
type: SiteQuality
SIO_000300: 1.593422e6

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.81e-1

QD
type: SiteQuality
SIO_000300: 1.498e1

FS
type: SiteQuality
SIO_000300: 5.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

GenotypeQuality
all individuals: 650
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7095
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1538
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 299
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2532
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501140867058965e-5
allele num: 66616
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 7.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.198e0

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 1.595511e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.391e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.76e-1

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2553
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.272e0

FS
type: SiteQuality
SIO_000300: 3.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.61e-1

QD
type: SiteQuality
SIO_000300: 7.84e0

VQSLOD
type: SiteQuality
SIO_000300: -2.48e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.596437e6

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39315
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2553
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2595
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7133
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.272e0

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.48e-1

FS
type: SiteQuality
SIO_000300: 3.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-1

DP
type: SiteQuality
SIO_000300: 1.596437e6

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38003
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2535
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2683
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 642
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.631773969430292e-4
allele num: 8636
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.597046e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 5.896e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

QD
type: SiteQuality
SIO_000300: 1.157e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.402e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.54e-1

GenotypeQuality
all individuals: 540
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2971
bin: 9.75e1
variant carriers: 354

GenotypeQuality
all individuals: 775
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 383
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6925
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 788
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 28
allele frequency: 2.431822129581379e-3
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 320
allele frequency: 3.087610961018912e-2
allele num: 10364
num of homozygotes: 7

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.352122832847571e-4
allele num: 66562
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.424778761061947e-3
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.67e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.78e0

DP
type: SiteQuality
SIO_000300: 1.612072e6

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2667
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2598
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2789
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7124
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.163e0

MQRankSum
type: SiteQuality
SIO_000300: -1.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.614058e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.041e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.02e-1

QD
type: SiteQuality
SIO_000300: 1.616e1

GenotypeQuality
all individuals: 328
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
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variant carriers: 0

GenotypeQuality
all individuals: 2667
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2598
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2789
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7124
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.041e0

FS
type: SiteQuality
SIO_000300: 3.163e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-2

QD
type: SiteQuality
SIO_000300: 1.616e1

DP
type: SiteQuality
SIO_000300: 1.614058e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.51e-1

GenotypeQuality
all individuals: 1661
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2808
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2726
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variant carriers: 0

GenotypeQuality
all individuals: 7324
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variant carriers: 0

GenotypeQuality
all individuals: 243
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variant carriers: 0

GenotypeQuality
all individuals: 690
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variant carriers: 0

GenotypeQuality
all individuals: 409
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 344
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GenotypeQuality
all individuals: 708
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variant carriers: 0

GenotypeQuality
all individuals: 2774
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.834e0

MQRankSum
type: SiteQuality
SIO_000300: 6.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.6e-1

DP
type: SiteQuality
SIO_000300: 1.620039e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.429e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.71e-1

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
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variant carriers: 0

GenotypeQuality
all individuals: 7373
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 38496
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 309
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variant carriers: 0

GenotypeQuality
all individuals: 381
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variant carriers: 0

GenotypeQuality
all individuals: 2779
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variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.524e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

QD
type: SiteQuality
SIO_000300: 1.575e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.32e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.72e-1

DP
type: SiteQuality
SIO_000300: 1.622626e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2850
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38860
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7456
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1767
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.123e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

FS
type: SiteQuality
SIO_000300: 7.78e-1

DP
type: SiteQuality
SIO_000300: 1.629909e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.929e1

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

QD
type: SiteQuality
SIO_000300: 1.244e1

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2850
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7456
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 341
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38860
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.123e0

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.929e1

DP
type: SiteQuality
SIO_000300: 1.629909e6

FS
type: SiteQuality
SIO_000300: 7.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

QD
type: SiteQuality
SIO_000300: 1.244e1

GenotypeQuality
all individuals: 1801
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7557
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001020346917952e-5
allele num: 66644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.632818e6

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.44e-1

FS
type: SiteQuality
SIO_000300: 4.103e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

QD
type: SiteQuality
SIO_000300: 1.166e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
all individuals: 241
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
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GenotypeQuality
all individuals: 218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 39195
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1820
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 7602
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

FS
type: SiteQuality
SIO_000300: 5.018e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 2.083e1

VQSLOD
type: SiteQuality
SIO_000300: -1.846e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-2

MQ
type: SiteQuality
SIO_000300: 5.895e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e0

DP
type: SiteQuality
SIO_000300: 1.635053e6

GenotypeQuality
all individuals: 218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2976
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 364
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2899
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 1.638511e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.57e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.17e0

QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
all individuals: 364
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39175
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2976
bin: 9.75e1
variant carriers: 244

GenotypeQuality
all individuals: 238
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2925
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.405286343612335e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 216
allele frequency: 2.078922040423484e-2
allele num: 10390
num of homozygotes: 4

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499775011249437e-5
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 24
allele frequency: 2.07720270036351e-3
allele num: 11554
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: 2.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.57e-2

DP
type: SiteQuality
SIO_000300: 1.638511e6

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
all individuals: 133
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39372
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7631
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2946
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2822
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 204
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73190162798753e-4
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.633347e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.502e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

QD
type: SiteQuality
SIO_000300: 1.18e1

FS
type: SiteQuality
SIO_000300: 4.512e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1874
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3035
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7734
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39913
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.841e0

FS
type: SiteQuality
SIO_000300: 1.134e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

VQSLOD
type: SiteQuality
SIO_000300: -5.239e-1

DP
type: SiteQuality
SIO_000300: 1.639015e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.435e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.394e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3060
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1894
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 7797
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40190
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498845888665727e-4
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

DP
type: SiteQuality
SIO_000300: 1.643786e6

QD
type: SiteQuality
SIO_000300: 1.304e1

FS
type: SiteQuality
SIO_000300: 1.108e0

MQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.0e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7807
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3029
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40230
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923076923076923e-4
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e-1

FS
type: SiteQuality
SIO_000300: 1.0042e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.89e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.643917e6

QD
type: SiteQuality
SIO_000300: 1.222e1

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40230
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3061
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.29e-1

FS
type: SiteQuality
SIO_000300: 1.0042e1

DP
type: SiteQuality
SIO_000300: 1.643917e6

QD
type: SiteQuality
SIO_000300: 1.222e1

GenotypeQuality
all individuals: 45
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2857
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3024
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728011059270779e-4
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.644315e6

QD
type: SiteQuality
SIO_000300: 1.317e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 5.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.02e-1

FS
type: SiteQuality
SIO_000300: 6.719e0

MQRankSum
type: SiteQuality
SIO_000300: 8.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.68e-1

GenotypeQuality
all individuals: 1900
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2876
bin: 9.75e1
variant carriers: 29

GenotypeQuality
all individuals: 3066
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7817
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.398225313268182e-4
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728309713100588e-4
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.450581395348837e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.64464e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.391e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.98e0