2-230695901-GATT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230695901
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230695898
    reference: chr 2
allele count: 13
allele frequency: 7.588139154798038e-4
allele num: 17132
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+27597_1014+27599delAAT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1324-349_1324-347delAAT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.236-349_236-347delAAT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1145-367_1145-365delAAT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1271-42_1271-40delAAT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1271-349_1271-347delAAT
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: GATT
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum

2-230701533-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701533
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701533
    reference: chr 2
allele count: 4
allele frequency: 3.31092937787637e-5
allele num: 120812
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+31G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+31G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+31G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+31G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+31G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21968G>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4088
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

2-230701533-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701533
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701533
    reference: chr 2
allele count: 2
allele frequency: 1.655464688938185e-5
allele num: 120812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+31G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+31G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21968G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+31G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+31G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+31G>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4088
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9026
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genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

2-230701534-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701534
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701534
    reference: chr 2
allele count: 2
allele frequency: 1.655738790648387e-5
allele num: 120792
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+30C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+30C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+30C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+30C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+30C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21967C>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7449
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9027
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4092
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4117
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

2-230701536-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701536
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701536
    reference: chr 2
allele count: 1
allele frequency: 8.277597510098669e-6
allele num: 120808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+28T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+28T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21965T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+28T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+28T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+28T>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5314
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9049
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23019
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

2-230701537-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701537
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701537
    reference: chr 2
allele count: 1
allele frequency: 8.277734549608463e-6
allele num: 120806
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21964A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+27A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+27A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+27A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+27A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+27A>G
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23035
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2607
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9045
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4094
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9401
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

2-230701544-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701544
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701544
    reference: chr 2
allele count: 1
allele frequency: 8.278831029058698e-6
allele num: 120790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+20C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21957C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+20C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+20C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+20C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+20C>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7449
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7702
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9065
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD

2-230701544-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701544
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701544
    reference: chr 2
allele count: 25
allele frequency: 2.069707757264674e-4
allele num: 120790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+20C>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21957C>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+20C>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+20C>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+20C>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+20C>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 14246
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20935
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7702
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7449
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9065
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9410
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

2-230701546-TAAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701546
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701543
    reference: chr 2
allele count: 1
allele frequency: 8.278282753025713e-6
allele num: 120798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+15_1270+17delCTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+15_1270+17delCTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+15_1144+17delCTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+15_1323+17delCTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+15_235+17delCTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21952_1014+21954delCTT
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9389
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23167
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1925
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5313
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4095
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: TAAG
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

2-230701548-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701548
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701548
    reference: chr 2
allele count: 3
allele frequency: 2.483279253029601e-5
allele num: 120808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21953T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+16T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+16T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+16T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+16T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+16T>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7441
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14249
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9392
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5310
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23165
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4114
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

2-230701552-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701552
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701552
    reference: chr 2
allele count: 4
allele frequency: 3.311203456896409e-5
allele num: 120802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21949C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+12C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+12C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+12C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+12C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+12C>G
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1923
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

2-230701553-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701553
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701553
    reference: chr 2
allele count: 1
allele frequency: 8.278008642241022e-6
allele num: 120802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21948A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+11A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+11A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+11A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+11A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+11A>G
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4094
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5312
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

2-230701557-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701557
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701557
    reference: chr 2
allele count: 1
allele frequency: 8.277186418792524e-6
allele num: 120814
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+7T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+7T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+7T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+7T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21944T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+7T>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4095
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2606
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5316
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1144+7T>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

2-230701558-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701558
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701558
    reference: chr 2
allele count: 1
allele frequency: 8.277323444690924e-6
allele num: 120812
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1270+6T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21943T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1270+6T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.235+6T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1144+6T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1323+6T>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9085
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1144+6T>C
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

2-230701577-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701577
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701577
    reference: chr 2
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1257C>G
  hgvsp: ENST00000389044.4:c.1257C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.222C>G
  hgvsp: ENST00000389045.3:c.222C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1310C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21924C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1131C>G
  hgvsp: ENST00000283943.5:c.1131C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1257C>G
  hgvsp: ENST00000409677.1:c.1257C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9057
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1916
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4087
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro377Pro
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-230701579-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701579
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701579
    reference: chr 2
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.652C>A
  hgvsp: ENST00000453485.1:c.652C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1308C>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21922C>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1129C>A
  hgvsp: ENSP00000283943.4:p.Pro377Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.220C>A
  hgvsp: ENSP00000373697.3:p.Pro74Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1255C>A
  hgvsp: ENSP00000386388.1:p.Pro419Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1255C>A
  hgvsp: ENSP00000373696.4:p.Pro419Thr
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14266
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5302
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9377
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4091
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9065
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro377Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-230701590-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701590
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701590
    reference: chr 2
allele count: 2
allele frequency: 1.656753756689143e-5
allele num: 120718
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1297C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.641C>T
  hgvsp: ENSP00000400967.1:p.Thr214Ile
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1244C>T
  hgvsp: ENSP00000386388.1:p.Thr415Ile
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1118C>T
  hgvsp: ENSP00000283943.4:p.Thr373Ile
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.209C>T
  hgvsp: ENSP00000373697.3:p.Thr70Ile
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21911C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1244C>T
  hgvsp: ENSP00000373696.4:p.Thr415Ile
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4083
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9061
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr373Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

2-230701594-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701594
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701594
    reference: chr 2
allele count: 7
allele frequency: 5.798830293089451e-5
allele num: 120714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.205C>T
  hgvsp: ENSP00000373697.3:p.Arg69Trp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21907C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.637C>T
  hgvsp: ENSP00000400967.1:p.Arg213Trp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1240C>T
  hgvsp: ENSP00000386388.1:p.Arg414Trp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1114C>T
  hgvsp: ENSP00000283943.4:p.Arg372Trp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1240C>T
  hgvsp: ENSP00000373696.4:p.Arg414Trp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1293C>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7543
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23290
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4072
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2597
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9043
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg372Trp
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

2-230701594-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701594
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701594
    reference: chr 2
allele count: 6
allele frequency: 4.970425965505244e-5
allele num: 120714
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1114C>G
  hgvsp: ENSP00000283943.4:p.Arg372Gly
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.205C>G
  hgvsp: ENSP00000373697.3:p.Arg69Gly
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1293C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.637C>G
  hgvsp: ENSP00000400967.1:p.Arg213Gly
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21907C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1240C>G
  hgvsp: ENSP00000373696.4:p.Arg414Gly
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1240C>G
  hgvsp: ENSP00000386388.1:p.Arg414Gly
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7543
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4072
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5299
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg372Gly
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

2-230701613-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701613
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701613
    reference: chr 2
allele count: 1
allele frequency: 8.28775070445881e-6
allele num: 120660
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.618A>G
  hgvsp: ENST00000453485.1:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21888A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1274A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1221A>G
  hgvsp: ENST00000409677.1:c.1221A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1095A>G
  hgvsp: ENST00000283943.5:c.1095A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1221A>G
  hgvsp: ENST00000389044.4:c.1221A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.186A>G
  hgvsp: ENST00000389045.3:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7421
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala365Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-230701615-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701615
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701615
    reference: chr 2
allele count: 3
allele frequency: 2.486654951758894e-5
allele num: 120644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1219G>T
  hgvsp: ENSP00000386388.1:p.Ala407Ser
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1093G>T
  hgvsp: ENSP00000283943.4:p.Ala365Ser
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21886G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.616G>T
  hgvsp: ENSP00000400967.1:p.Ala206Ser
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1219G>T
  hgvsp: ENSP00000373696.4:p.Ala407Ser
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1272G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.184G>T
  hgvsp: ENSP00000373697.3:p.Ala62Ser
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14229
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9009
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4087
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala365Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

2-230701622-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701622
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701622
    reference: chr 2
allele count: 2
allele frequency: 1.658292290599141e-5
allele num: 120606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1212C>T
  hgvsp: ENST00000409677.1:c.1212C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21879C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.177C>T
  hgvsp: ENST00000389045.3:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1086C>T
  hgvsp: ENST00000283943.5:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1212C>T
  hgvsp: ENST00000389044.4:c.1212C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.609C>T
  hgvsp: ENST00000453485.1:c.609C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1265C>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn362Asn
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP

2-230701653-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701653
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701653
    reference: chr 2
allele count: 2
allele frequency: 1.663782776520698e-5
allele num: 120208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1181G>A
  hgvsp: ENSP00000386388.1:p.Arg394Gln
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.146G>A
  hgvsp: ENSP00000373697.3:p.Arg49Gln
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1234G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21848G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.578G>A
  hgvsp: ENSP00000400967.1:p.Arg193Gln
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1055G>A
  hgvsp: ENSP00000283943.4:p.Arg352Gln
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1181G>A
  hgvsp: ENSP00000373696.4:p.Arg394Gln
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20931
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4037
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8838
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg352Gln
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/2-230701656-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701656
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701656
    reference: chr 2
allele count: 1
allele frequency: 8.326671995736744e-6
allele num: 120096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21845G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1052G>T
  hgvsp: ENSP00000283943.4:p.Arg351Leu
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.143G>T
  hgvsp: ENSP00000373697.3:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1231G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1178G>T
  hgvsp: ENSP00000386388.1:p.Arg393Leu
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.575G>T
  hgvsp: ENSP00000400967.1:p.Arg192Leu
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1178G>T
  hgvsp: ENSP00000373696.4:p.Arg393Leu
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8802
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22898
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9339
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3960
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg351Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ

2-230701656-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701656
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701656
    reference: chr 2
allele count: 1
allele frequency: 8.326671995736744e-6
allele num: 120096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1231G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1052G>A
  hgvsp: ENSP00000283943.4:p.Arg351His
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1178G>A
  hgvsp: ENSP00000373696.4:p.Arg393His
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1178G>A
  hgvsp: ENSP00000386388.1:p.Arg393His
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21845G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.143G>A
  hgvsp: ENSP00000373697.3:p.Arg48His
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.575G>A
  hgvsp: ENSP00000400967.1:p.Arg192His
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8802
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4031
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg351His
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

2-230701665-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701665
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701665
    reference: chr 2
allele count: 1
allele frequency: 8.346688034188035e-6
allele num: 119808
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.134C>T
  hgvsp: ENSP00000373697.3:p.Ala45Val
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1043C>T
  hgvsp: ENSP00000283943.4:p.Ala348Val
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1222C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1169C>T
  hgvsp: ENSP00000373696.4:p.Ala390Val
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.566C>T
  hgvsp: ENSP00000400967.1:p.Ala189Val
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1169C>T
  hgvsp: ENSP00000386388.1:p.Ala390Val
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21836C>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1131
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8737
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala348Val
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

2-230701669-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701669
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701669
    reference: chr 2
allele count: 16
allele frequency: 1.337770271400144e-4
allele num: 119602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.130G>A
  hgvsp: ENSP00000373697.3:p.Ala44Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21832G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1165G>A
  hgvsp: ENSP00000386388.1:p.Ala389Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.562G>A
  hgvsp: ENSP00000400967.1:p.Ala188Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1218G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1039G>A
  hgvsp: ENSP00000283943.4:p.Ala347Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1165G>A
  hgvsp: ENSP00000373696.4:p.Ala389Thr
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7515
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20496
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3911
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22640
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8677
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala347Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP

2-230701692-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701692
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701692
    reference: chr 2
allele count: 1
allele frequency: 8.548762139242238e-6
allele num: 116976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1195G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.107G>C
  hgvsp: ENSP00000373697.3:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.539G>C
  hgvsp: ENSP00000400967.1:p.Gly180Ala
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1016G>C
  hgvsp: ENSP00000283943.4:p.Gly339Ala
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1142G>C
  hgvsp: ENSP00000373696.4:p.Gly381Ala
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1142G>C
  hgvsp: ENSP00000386388.1:p.Gly381Ala
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21809G>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9302
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3694
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7985
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly339Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

2-230701692-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701692
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701692
    reference: chr 2
allele count: 1
allele frequency: 8.548762139242238e-6
allele num: 116976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1142G>A
  hgvsp: ENSP00000373696.4:p.Gly381Asp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1142G>A
  hgvsp: ENSP00000386388.1:p.Gly381Asp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.539G>A
  hgvsp: ENSP00000400967.1:p.Gly180Asp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.107G>A
  hgvsp: ENSP00000373697.3:p.Gly36Asp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21809G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1016G>A
  hgvsp: ENSP00000283943.4:p.Gly339Asp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1195G>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18703
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3694
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3702
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7985
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly339Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

2-230701693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701693
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701693
    reference: chr 2
allele count: 18
allele frequency: 1.540568298527902e-4
allele num: 116840
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1141G>A
  hgvsp: ENSP00000386388.1:p.Gly381Ser
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21808G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.538G>A
  hgvsp: ENSP00000400967.1:p.Gly180Ser
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1015G>A
  hgvsp: ENSP00000283943.4:p.Gly339Ser
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1141G>A
  hgvsp: ENSP00000373696.4:p.Gly381Ser
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.106G>A
  hgvsp: ENSP00000373697.3:p.Gly36Ser
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1194G>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7164
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18587
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6825
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12906
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3694
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7971
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly339Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

2-230701698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701698
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701698
    reference: chr 2
allele count: 2
allele frequency: 1.723335688558774e-5
allele num: 116054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.101G>A
  hgvsp: ENSP00000373697.3:p.Arg34Gln
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.533G>A
  hgvsp: ENSP00000400967.1:p.Arg178Gln
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1189G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1010G>A
  hgvsp: ENSP00000283943.4:p.Arg337Gln
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1136G>A
  hgvsp: ENSP00000386388.1:p.Arg379Gln
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1136G>A
  hgvsp: ENSP00000373696.4:p.Arg379Gln
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21803G>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9287
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2536
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3913
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg337Gln
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

2-230701699-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701699
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701699
    reference: chr 2
allele count: 2
allele frequency: 1.728907330567082e-5
allele num: 115680
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1135C>T
  hgvsp: ENSP00000386388.1:p.Arg379Trp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.532C>T
  hgvsp: ENSP00000400967.1:p.Arg178Trp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1188C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1009C>T
  hgvsp: ENSP00000283943.4:p.Arg337Trp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1135C>T
  hgvsp: ENSP00000373696.4:p.Arg379Trp
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21802C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.100C>T
  hgvsp: ENSP00000373697.3:p.Arg34Trp
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6845
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9284
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2533
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg337Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-230701711-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701711
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701711
    reference: chr 2
allele count: 1
allele frequency: 8.711560240439062e-6
allele num: 114790
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1134-11T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.531-11T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1187-11T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1134-11T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21790T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-11T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1008-11T>G
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4900
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3609
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9278
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

2-230701716-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701716
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701716
    reference: chr 2
allele count: 7
allele frequency: 6.129167834127206e-5
allele num: 114208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1134-16C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21785C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1008-16C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-16C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.531-16C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1134-16C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1187-16C>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17376
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3607
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7618
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4430
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

2-230701717-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701717
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701717
    reference: chr 2
allele count: 4
allele frequency: 3.502074979425309e-5
allele num: 114218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1134-17A>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1187-17A>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21784A>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.531-17A>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1008-17A>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1134-17A>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-17A>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7053
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9272
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3882
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18520
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7611
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4490
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

2-230701720-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701720
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701720
    reference: chr 2
allele count: 1
allele frequency: 8.793373313870666e-6
allele num: 113722
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1134-20A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1187-20A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.531-20A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21781A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1008-20A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1134-20A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-20A>G
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12330
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4850
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7544
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9267
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3558
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

2-230701722-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701722
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701722
    reference: chr 2
allele count: 1
allele frequency: 8.820364457459382e-6
allele num: 113374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.531-22T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1008-22T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1187-22T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21779T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1134-22T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1134-22T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-22T>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4833
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7398
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

2-230701724-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701724
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701724
    reference: chr 2
allele count: 3
allele frequency: 2.65041081367612e-5
allele num: 113190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1187-24C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1008-24C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1134-24C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-24C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21777C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1134-24C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.531-24C>G
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16729
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6149
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2512
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-230701742-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230701742
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230701741
    reference: chr 2
allele count: 1
allele frequency: 9.00009000090001e-6
allele num: 111110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1134-43delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+21758delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.531-43delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1008-43delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1187-43delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-43delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1134-43delG
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1673
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4587
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9242
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13618
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: AC
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

2-230705493-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705493
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705493
    reference: chr 2
allele count: 1
allele frequency: 1.456155167894691e-5
allele num: 68674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+18008T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+45T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+45T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+45T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3793T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+45T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+45T>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19638
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5983
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3582
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3936
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

2-230705496-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705496
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705496
    reference: chr 2
allele count: 1
allele frequency: 1.473448458772912e-5
allele num: 67868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3796C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+42C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+42C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+18005C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+42C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+42C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+42C>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7859
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4508
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2811
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5228
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21972
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4433
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6438
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD

2-230705505-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705505
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705505
    reference: chr 2
allele count: 1
allele frequency: 1.410994468901682e-5
allele num: 70872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+33A>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17996A>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+33A>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+33A>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3805A>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+33A>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+33A>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5201
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6364
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3516
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2520
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2580
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6765
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/2-230705509-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705509
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705509
    reference: chr 2
allele count: 1
allele frequency: 1.392796456725814e-5
allele num: 71798
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+29G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+29G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3809G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+29G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17992G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+29G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+29G>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7677
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24052
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4285
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3490
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6974
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

2-230705512-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705512
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705512
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 70484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17989T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3812T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+26T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+26T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+26T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+26T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+26T>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16775
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3471
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22329
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6341
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

2-230705516-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705516
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705517
    reference: chr 2
allele count: 5245
allele frequency: 8.370838520220882e-2
allele num: 62658
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+21dupT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+21dupT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17984dupT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3817dupT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+21dupT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+21dupT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+21dupT
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 2.75e1
  variant carriers: 562
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 2.25e1
  variant carriers: 1072
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 7.5e0
  variant carriers: 583
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 17952
  bin: 1.25e1
  variant carriers: 1805
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 1.75e1
  variant carriers: 1798
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 3.25e1
  variant carriers: 301
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 3.25e1
  variant carriers: 369
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 2.75e1
  variant carriers: 306
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 5.25e1
  variant carriers: 394
genotype quality: GenotypeQuality
  all individuals: 2631
  bin: 2.25e1
  variant carriers: 290
genotype quality: GenotypeQuality
  all individuals: 12934
  bin: 9.75e1
  variant carriers: 1227
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 4.75e1
  variant carriers: 446
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 382
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 1.75e1
  variant carriers: 205
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 3.75e1
  variant carriers: 424
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 1.25e1
  variant carriers: 207
num of homozygotes: 21
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

2-230705516-T-TAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705516
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705518
    reference: chr 2
allele count: 130
allele frequency: 2.074755019311181e-3
allele num: 62658
alternate allele: TAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+20_530+21dupTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+20_1133+21dupTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3818_99-3817dupTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+20_1133+21dupTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17983_1014+17984dupTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+20_1186+21dupTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+20_1007+21dupTT
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 7.5e0
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17952
  bin: 1.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 1.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 1.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 4.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 19058
  bin: 2.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 1.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 12934
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 2.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2152
  bin: 7.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 8.25e1
  variant carriers: 7
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

2-230705516-T-TAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705516
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705519
    reference: chr 2
allele count: 24
allele frequency: 3.830316958728335e-4
allele num: 62658
alternate allele: TAAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+19_530+21dupTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+19_1186+21dupTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17982_1014+17984dupTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+19_1133+21dupTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3819_99-3817dupTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+19_1133+21dupTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+19_1007+21dupTTT
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17952
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2631
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19058
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12934
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

2-230705516-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705516
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705515
    reference: chr 2
allele count: 26015
allele frequency: 4.151903986721568e-1
allele num: 62658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+21delT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+21delT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3817delT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+21delT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17984delT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+21delT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+21delT
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.75e1
  variant carriers: 210
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 7.5e0
  variant carriers: 3500
genotype depth: GenotypeDepth
  all individuals: 17952
  bin: 1.25e1
  variant carriers: 9179
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 276
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 2.25e1
  variant carriers: 4796
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 3.25e1
  variant carriers: 1158
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 2.75e1
  variant carriers: 2333
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 497
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 1.75e1
  variant carriers: 8601
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 1.75e1
  variant carriers: 973
genotype quality: GenotypeQuality
  all individuals: 19058
  bin: 2.5e0
  variant carriers: 819
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 8.25e1
  variant carriers: 960
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 3.75e1
  variant carriers: 1177
genotype quality: GenotypeQuality
  all individuals: 2631
  bin: 2.25e1
  variant carriers: 1035
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 9.25e1
  variant carriers: 867
genotype quality: GenotypeQuality
  all individuals: 12934
  bin: 9.75e1
  variant carriers: 11739
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 1090
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 2.75e1
  variant carriers: 1117
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 4.75e1
  variant carriers: 1127
num of homozygotes: 1225
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: TA
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD

2-230705516-TAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705516
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705514
    reference: chr 2
allele count: 598
allele frequency: 9.543873088831435e-3
allele num: 62658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+20_1133+21delTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3818_99-3817delTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+20_1133+21delTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+20_1007+21delTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17983_1014+17984delTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+20_1186+21delTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+20_530+21delTT
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 2.25e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 17952
  bin: 1.25e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 7.5e0
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 1.75e1
  variant carriers: 239
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 2.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 3.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 19058
  bin: 2.5e0
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 12934
  bin: 9.75e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 1.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 4.75e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 3.75e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 8.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 6.25e1
  variant carriers: 25
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: TAA
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

2-230705516-TAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705516
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705513
    reference: chr 2
allele count: 1
allele frequency: 1.59596539947014e-5
allele num: 62658
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19058
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12934
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2152
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2631
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4410
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9496
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4828
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.880350250590472e-5
  allele num: 34718
  num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
reference allele: TAAA
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

2-230705518-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705518
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705518
    reference: chr 2
allele count: 4
allele frequency: 2.104598547827002e-4
allele num: 19006
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3818T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+20T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17983T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+20T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+20T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+20T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+20T>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5501
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10507
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8972
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33857
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1493
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

2-230705519-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705519
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705519
    reference: chr 2
allele count: 1
allele frequency: 1.1101243339254e-5
allele num: 90080
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+19T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+19T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+19T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+19T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17982T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3819T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+19T>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14986
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2896
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6388
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4400
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

2-230705519-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705519
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705519
    reference: chr 2
allele count: 2
allele frequency: 2.220248667850799e-5
allele num: 90080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+19T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+19T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17982T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+19T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+19T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3819T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+19T>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11689
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14986
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5020
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8474
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2896
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5237
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 1.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

2-230705525-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705525
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705525
    reference: chr 2
allele count: 3
allele frequency: 2.726826519296842e-5
allele num: 110018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+13T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3825T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+13T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+13T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+13T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17976T>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+13T>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4908
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13648
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11438
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6846
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1314
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5702
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/2-230705526-AAAAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705526
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705522
    reference: chr 2
allele count: 3
allele frequency: 2.725686873092019e-5
allele num: 110064
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+8_530+11delGTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+8_1133+11delGTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+8_1186+11delGTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17971_1014+17974delGTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+8_1007+11delGTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3830_99-3827delGTTT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+8_1133+11delGTTT
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4906
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13257
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9923
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5628
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10147
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5059
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2748
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1007+8_1007+11delGTTT
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: AAAAC
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-230705527-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705527
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705528
    reference: chr 2
allele count: 1
allele frequency: 9.079683300646473e-6
allele num: 110136
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+10_530+11insG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+10_1133+11insG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+10_1007+11insG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+10_1133+11insG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3828_99-3827insG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17973_1014+17974insG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+10_1186+11insG
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12715
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3275
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17139
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10212
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5005
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/2-230705527-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705527
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705527
    reference: chr 2
allele count: 3
allele frequency: 2.723904990193942e-5
allele num: 110136
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+11T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17974T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+11T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+11T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3827T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+11T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+11T>G
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12715
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10212
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5485
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6702
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/2-230705528-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705528
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705528
    reference: chr 2
allele count: 1
allele frequency: 9.108795452889309e-6
allele num: 109784
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+10T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+10T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+10T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+10T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3828T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17973T>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+10T>G
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12326
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17559
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/2-230705528-AAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705528
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705526
    reference: chr 2
allele count: 5
allele frequency: 4.554397726444655e-5
allele num: 109784
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+8_530+9delGT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+8_1133+9delGT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3830_99-3829delGT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17971_1014+17972delGT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+8_1186+9delGT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+8_1007+9delGT
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+8_1133+9delGT
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12237
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12326
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10437
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5360
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1007+8_1007+9delGT
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: AAC
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-230705529-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705529
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705529
    reference: chr 2
allele count: 1
allele frequency: 9.249667011987568e-6
allele num: 108112
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+9T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17972T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+9T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+9T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+9T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+9T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3829T>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12291
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11933
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6599
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16938
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9883
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3131
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/2-230705529-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705529
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705528
    reference: chr 2
allele count: 15
allele frequency: 1.387450051798135e-4
allele num: 108112
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+8delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17971delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+8delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+8delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3830delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+8delG
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+8delG
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 11933
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12291
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10541
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12606
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3131
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5291
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
hgvs: c.1007+8delG
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: AC
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/2-230705530-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705530
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705530
    reference: chr 2
allele count: 279
allele frequency: 3.425077954283189e-3
allele num: 81458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1133+8G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1186+8G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1133+8G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.1007+8G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.530+8G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3830G>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17971G>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11263
  bin: 1.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 3.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12143
  bin: 1.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 12914
  bin: 2.25e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 2.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 7.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 7.5e0
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 4.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 9.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 2452
  bin: 1.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 4208
  bin: 2.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 5433
  bin: 3.25e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 7.75e1
  variant carriers: 7
hgvs: c.1007+8G>T
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

2-230705548-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705548
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705548
    reference: chr 2
allele count: 3
allele frequency: 2.615336332252328e-5
allele num: 114708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1123G>A
  hgvsp: ENSP00000386388.1:p.Ala375Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1176G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1123G>A
  hgvsp: ENSP00000373696.4:p.Ala375Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3848G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.520G>A
  hgvsp: ENSP00000400967.1:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.997G>A
  hgvsp: ENSP00000283943.4:p.Ala333Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17953G>A
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14699
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28846
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1288
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40505
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala333Thr
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

2-230705554-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705554
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705554
    reference: chr 2
allele count: 1
allele frequency: 8.655011251514627e-6
allele num: 115540
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1170T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1117T>C
  hgvsp: ENSP00000386388.1:p.Ser373Pro
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3854T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1117T>C
  hgvsp: ENSP00000373696.4:p.Ser373Pro
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17947T>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.514T>C
  hgvsp: ENSP00000400967.1:p.Ser172Pro
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.991T>C
  hgvsp: ENSP00000283943.4:p.Ser331Pro
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15211
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43249
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser331Pro
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

2-230705573-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705573
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705573
    reference: chr 2
allele count: 1
allele frequency: 8.578094976667581e-6
allele num: 116576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17928A>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.972A>T
  hgvsp: ENST00000283943.5:c.972A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1098A>T
  hgvsp: ENST00000389044.4:c.1098A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1151A>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.495A>T
  hgvsp: ENST00000453485.1:c.495A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3873A>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1098A>T
  hgvsp: ENST00000409677.1:c.1098A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16572
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4615
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45038
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr324Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

2-230705589-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705589
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705589
    reference: chr 2
allele count: 1
allele frequency: 8.606444505645828e-6
allele num: 116192
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.956G>C
  hgvsp: ENSP00000283943.4:p.Ser319Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1135G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1082G>C
  hgvsp: ENSP00000386388.1:p.Ser361Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.479G>C
  hgvsp: ENSP00000400967.1:p.Ser160Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1082G>C
  hgvsp: ENSP00000373696.4:p.Ser361Thr
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17912G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3889G>C
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45462
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser319Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

2-230705593-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705593
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705593
    reference: chr 2
allele count: 1
allele frequency: 8.634683797879321e-6
allele num: 115812
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.952C>G
  hgvsp: ENSP00000283943.4:p.Pro318Ala
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1078C>G
  hgvsp: ENSP00000386388.1:p.Pro360Ala
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1078C>G
  hgvsp: ENSP00000373696.4:p.Pro360Ala
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1131C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.475C>G
  hgvsp: ENSP00000400967.1:p.Pro159Ala
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3893C>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17908C>G
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17533
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3986
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro318Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-230705594-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705594
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705594
    reference: chr 2
allele count: 2
allele frequency: 1.732411690314086e-5
allele num: 115446
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3894C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1077C>T
  hgvsp: ENST00000409677.1:c.1077C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.474C>T
  hgvsp: ENST00000453485.1:c.474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.951C>T
  hgvsp: ENST00000283943.5:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1077C>T
  hgvsp: ENST00000389044.4:c.1077C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17907C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1130C>T
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4320
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu317Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

2-230705612-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705612
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705612
    reference: chr 2
allele count: 1
allele frequency: 9.199801284292259e-6
allele num: 108698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1112G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1059G>A
  hgvsp: ENST00000409677.1:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3912G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17889G>A
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1059G>A
  hgvsp: ENST00000389044.4:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.456G>A
  hgvsp: ENST00000453485.1:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.933G>A
  hgvsp: ENST00000283943.5:c.933G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23482
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu311Glu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD

2-230705620-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705620
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705620
    reference: chr 2
allele count: 1
allele frequency: 9.580562953879169e-6
allele num: 104378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3920C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.448C>T
  hgvsp: ENSP00000400967.1:p.Arg150Cys
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1104C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17881C>T
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1051C>T
  hgvsp: ENSP00000373696.4:p.Arg351Cys
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1051C>T
  hgvsp: ENSP00000386388.1:p.Arg351Cys
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.925C>T
  hgvsp: ENSP00000283943.4:p.Arg309Cys
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15096
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3598
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg309Cys
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

2-230705625-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705625
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705625
    reference: chr 2
allele count: 1
allele frequency: 9.972475966332921e-6
allele num: 100276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17876A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1046A>G
  hgvsp: ENSP00000386388.1:p.Lys349Arg
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1046A>G
  hgvsp: ENSP00000373696.4:p.Lys349Arg
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3925A>G
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.920A>G
  hgvsp: ENSP00000283943.4:p.Lys307Arg
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.443A>G
  hgvsp: ENSP00000400967.1:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1099A>G
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10078
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27381
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3261
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19534
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys307Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

2-230705627-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 230705627
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 230705627
    reference: chr 2
allele count: 2
allele frequency: 1.998321410015587e-5
allele num: 100084
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000153827
  ensembl transcript: ENST00000479037
  gene symbol: TRIP12
  hgvsc: ENST00000479037.1:n.1097G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000283943
  ensembl transcript: ENST00000283943
  gene symbol: TRIP12
  hgvsc: ENST00000283943.5:c.918G>C
  hgvsp: ENST00000283943.5:c.918G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373697
  ensembl transcript: ENST00000389045
  gene symbol: TRIP12
  hgvsc: ENST00000389045.3:c.99-3927G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000386388
  ensembl transcript: ENST00000409677
  gene symbol: TRIP12
  hgvsc: ENST00000409677.1:c.1044G>C
  hgvsp: ENST00000409677.1:c.1044G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000440715
  ensembl transcript: ENST00000543084
  gene symbol: TRIP12
  hgvsc: ENST00000543084.1:c.1014+17874G>C
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000373696
  ensembl transcript: ENST00000389044
  gene symbol: TRIP12
  hgvsc: ENST00000389044.4:c.1044G>C
  hgvsp: ENST00000389044.4:c.1044G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000153827
  ensembl protein: ENSP00000400967
  ensembl transcript: ENST00000453485
  gene symbol: TRIP12
  hgvsc: ENST00000453485.1:c.441G>C
  hgvsp: ENST00000453485.1:c.441G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12306
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16612
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3214
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr306Thr
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 269
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2279
bin: 9.75e1
variant carriers: 13

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 2.046384720327421e-3
allele num: 5864
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.803921568627451e-4
allele num: 1020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.92e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.65e1

MQRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

QD
type: SiteQuality
SIO_000300: 1.83e1

FS
type: SiteQuality
SIO_000300: 3.916e0

DP
type: SiteQuality
SIO_000300: 3.73176e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
all individuals: 22886
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4123
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9403
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 5322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.434570906877663e-4
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66444
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.2e-1

FS
type: SiteQuality
SIO_000300: 2.892e0

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

QD
type: SiteQuality
SIO_000300: 1.229e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

DP
type: SiteQuality
SIO_000300: 1.963352e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 22886
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4123
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9403
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.742790335151988e-5
allele num: 10264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.086427267194157e-5
allele num: 16430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.229e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

FS
type: SiteQuality
SIO_000300: 2.892e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 9.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

DP
type: SiteQuality
SIO_000300: 1.963352e6

GenotypeQuality
all individuals: 9400
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22814
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.087168249330411e-5
allele num: 16428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505298651252408e-5
allele num: 66432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: -2.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

DP
type: SiteQuality
SIO_000300: 1.963674e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.93e-1

FS
type: SiteQuality
SIO_000300: 1.153e0

QD
type: SiteQuality
SIO_000300: 9.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 4095
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1921
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variant carriers: 0

GenotypeQuality
all individuals: 2607
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505072092953252e-5
allele num: 66442
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.315e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

DP
type: SiteQuality
SIO_000300: 1.96412e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.82e-1

QD
type: SiteQuality
SIO_000300: 1.188e1

FS
type: SiteQuality
SIO_000300: 3.091e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 161
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4118
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
all individuals: 5312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1921
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.742790335151988e-5
allele num: 10264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.964287e6

FS
type: SiteQuality
SIO_000300: 4.363e0

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.687e1

VQSLOD
type: SiteQuality
SIO_000300: 2.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

GenotypeQuality
all individuals: 4112
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4092
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9410
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23124
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505208019748329e-5
allele num: 66436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.965923e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.85e-1

FS
type: SiteQuality
SIO_000300: 5.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
SIO_000300: 7.25e-1

QD
type: SiteQuality
SIO_000300: 1.138e1

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4092
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4112
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 2.341006632852126e-3
allele num: 10252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.965923e6

MQRankSum
type: SiteQuality
SIO_000300: 7.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.38e0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

FS
type: SiteQuality
SIO_000300: 5.79e-1

QD
type: SiteQuality
SIO_000300: 1.138e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.03e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.85e-1

GenotypeQuality
all individuals: 409
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9083
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4114
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66438
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.577e0

MQ
type: SiteQuality
SIO_000300: 5.728e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 9.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.99e-1

DP
type: SiteQuality
SIO_000300: 1.965537e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e-1

QD
type: SiteQuality
SIO_000300: 1.602e1

MQRankSum
type: SiteQuality
SIO_000300: -1.066e0

VQSLOD
type: SiteQuality
SIO_000300: 2.68e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4097
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9086
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66442
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.923406743324888e-4
allele num: 10262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.129999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.146e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.522e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.42e-1

FS
type: SiteQuality
SIO_000300: 5.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 1.965798e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4115
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.43427458617332e-4
allele num: 16432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.156e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.888e1

DP
type: SiteQuality
SIO_000300: 1.966227e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

QD
type: SiteQuality
SIO_000300: 1.051e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 9085
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.738994935722633e-5
allele num: 10268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.25e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e-1

FS
type: SiteQuality
SIO_000300: 1.585e1

DP
type: SiteQuality
SIO_000300: 1.966088e6

MQ
type: SiteQuality
SIO_000300: 5.446e1

VQSLOD
type: SiteQuality
SIO_000300: -1.648e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.731413001167769e-5
allele num: 10276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 5.173e0

DP
type: SiteQuality
SIO_000300: 1.966454e6

VQSLOD
type: SiteQuality
SIO_000300: -2.564e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.498e0

MQRankSum
type: SiteQuality
SIO_000300: 2.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.053e0

QD
type: SiteQuality
SIO_000300: 6.45e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2606
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23275
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505253334136135e-5
allele num: 66434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.120000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
SIO_000300: 1.439e1

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 1.067e0

VQSLOD
type: SiteQuality
SIO_000300: -3.914e-1

DP
type: SiteQuality
SIO_000300: 1.966412e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 4113
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505797319680771e-5
allele num: 66410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.973e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.912e0

DP
type: SiteQuality
SIO_000300: 1.966795e6

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-1

QD
type: SiteQuality
SIO_000300: 2.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.323e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.432e0

VQSLOD
type: SiteQuality
SIO_000300: -1.191e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.966532e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 1916
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 23300
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012320390396723e-5
allele num: 66394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.77e0

VQSLOD
type: SiteQuality
SIO_000300: -1.353e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.843e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.966264e6

MQRankSum
type: SiteQuality
SIO_000300: 6.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
all individuals: 122
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 460
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variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.054407423028258e-4
allele num: 66388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.209e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

FS
type: SiteQuality
SIO_000300: 5.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.966547e6

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9372
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 45
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 9043
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012592637223595e-5
allele num: 66388
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.469812630117973e-4
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.929e1

DP
type: SiteQuality
SIO_000300: 1.966547e6

QD
type: SiteQuality
SIO_000300: 1.209e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.1020258725897e-5
allele num: 16388
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.657999999999999e0

DP
type: SiteQuality
SIO_000300: 1.964529e6

MQRankSum
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SIO_000300: -1.902e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.264e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 131
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.522022248349462e-5
allele num: 66342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.033e0

FS
type: SiteQuality
SIO_000300: 2.533e0

QD
type: SiteQuality
SIO_000300: 8.94e0

VQSLOD
type: SiteQuality
SIO_000300: 6.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

DP
type: SiteQuality
SIO_000300: 1.964428e6

GenotypeQuality
all individuals: 143
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507749834147518e-5
allele num: 66324
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.106497313141182e-5
allele num: 16376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.097e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.095e0

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

QD
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SIO_000300: 1.319e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: 7.12e-1

DP
type: SiteQuality
SIO_000300: 1.963679e6

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 180
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GenotypeQuality
all individuals: 137
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GenotypeQuality
all individuals: 158
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GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 5221
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GenotypeQuality
all individuals: 82
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.775171065493646e-5
allele num: 10230
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.510984859931704e-5
allele num: 66182
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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ClippingRankSum
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SIO_000300: -9.88e-1

DP
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.511807214344027e-5
allele num: 66146
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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FS
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DP
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.511807214344027e-5
allele num: 66146
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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MQRankSum
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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SIO_000300: 1.953056e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele num: 15968
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66044
num of homozygotes: 0

FS
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DP
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BaseQRankSum
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.122176747006215e-4
allele num: 65970
num of homozygotes: 0

Latino
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allele frequency: 8.707767328456984e-5
allele num: 11484
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African
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allele frequency: 9.792401096748923e-5
allele num: 10212
num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.28e-1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 3.246e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.533319022355791e-5
allele num: 65218
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8554
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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Latino
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South Asian
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MQRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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DP
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QD
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 7.063144511936714e-5
allele num: 14158
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African
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Other
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6604
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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European (Non-Finnish)
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South Asian
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allele num: 14050
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European (Finnish)
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Other
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MQ
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ClippingRankSum
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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QD
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FS
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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FS
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InbreedingCoeff
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VQSLOD
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MQ
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DP
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ReadPosRankSum
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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South Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6604
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QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

FS
type: SiteQuality
SIO_000300: 1.302e0

VQSLOD
type: SiteQuality
SIO_000300: -1.584e0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 5.747e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.82e-1

DP
type: SiteQuality
SIO_000300: 1.859714e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.2e-2

GenotypeQuality
all individuals: 570
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4602
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19156
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3892
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2525
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546503355912282e-5
allele num: 64662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.919e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.373e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

DP
type: SiteQuality
SIO_000300: 1.843829e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

FS
type: SiteQuality
SIO_000300: 6.819e0

QD
type: SiteQuality
SIO_000300: 1.51e1

MQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

GenotypeQuality
all individuals: 170
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4886
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3578
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3886
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9277
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 18385
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.304345129175325e-5
allele num: 64486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514692517418964e-4
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.879e0

DP
type: SiteQuality
SIO_000300: 1.833843e6

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.215e0

QD
type: SiteQuality
SIO_000300: 1.108e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e-1

GenotypeQuality
all individuals: 1847
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3573
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4879
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.203089138390919e-5
allele num: 64484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12340
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

FS
type: SiteQuality
SIO_000300: 1.368e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.55e-1

DP
type: SiteQuality
SIO_000300: 1.833457e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.3e-2

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4391
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18019
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3873
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.327781479013991e-5
allele num: 12008
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

DP
type: SiteQuality
SIO_000300: 1.825338e6

MQRankSum
type: SiteQuality
SIO_000300: -9.29e-1

FS
type: SiteQuality
SIO_000300: 1.523e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

QD
type: SiteQuality
SIO_000300: 1.127e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

GenotypeQuality
all individuals: 4293
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9261
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3861
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2516
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
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variant carriers: 0

GenotypeQuality
all individuals: 17390
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.978048293753742e-5
allele num: 10022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11784
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.05e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

MQ
type: SiteQuality
SIO_000300: 5.894e1

FS
type: SiteQuality
SIO_000300: 2.367e0

VQSLOD
type: SiteQuality
SIO_000300: 2.31e0

DP
type: SiteQuality
SIO_000300: 1.817915e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

GenotypeQuality
all individuals: 390
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9264
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 841
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variant carriers: 0

GenotypeQuality
all individuals: 4819
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variant carriers: 0

GenotypeQuality
all individuals: 110
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variant carriers: 0

GenotypeQuality
all individuals: 316
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variant carriers: 0

GenotypeQuality
all individuals: 3855
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variant carriers: 0

GenotypeQuality
all individuals: 17377
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3520
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7354
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.712328767123288e-4
allele num: 11680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557486839236208e-5
allele num: 64206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.526e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.815232e6

QD
type: SiteQuality
SIO_000300: 1.092e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

GenotypeQuality
all individuals: 756
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3274
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6389
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3774
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.186521120075937e-4
allele num: 8428
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 1.755755e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.088e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

GenotypeQuality
all individuals: 2861
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5278
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3238
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23009
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
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variant carriers: 0

GenotypeQuality
all individuals: 6406
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.840424927569164e-5
allele num: 35206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3934
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.48e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.456e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.708e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.33e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.49599e5

GenotypeQuality
all individuals: 1112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6359
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 748
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3613
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.844861135680169e-5
allele num: 11306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3874
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 7.58379e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.51e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.738e1

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3979
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
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variant carriers: 1

GenotypeQuality
all individuals: 24187
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6182
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.481042654028436e-4
allele num: 6752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5454
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.051e1

DP
type: SiteQuality
SIO_000300: 7.91627e5

MQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.429e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.45e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

VQSLOD
type: SiteQuality
SIO_000300: -2.624e0

QD
type: SiteQuality
SIO_000300: 1.261e1

GenotypeQuality
all individuals: 510
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6347
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6932
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.608815426997245e-5
allele num: 11616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36822
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.587e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.42e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.58e-1

QD
type: SiteQuality
SIO_000300: 3.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.261e0

DP
type: SiteQuality
SIO_000300: 8.17341e5

GenotypeQuality
all individuals: 298
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3953
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.661e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

DP
type: SiteQuality
SIO_000300: 8.43247e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

MQ
type: SiteQuality
SIO_000300: 6.134e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.39e-2

QD
type: SiteQuality
SIO_000300: 5.47e0

GenotypeQuality
all individuals: 1341
bin: 6.25e1
variant carriers: 301

GenotypeQuality
all individuals: 1013
bin: 8.75e1
variant carriers: 179

GenotypeQuality
all individuals: 19058
bin: 2.5e0
variant carriers: 172

GenotypeQuality
all individuals: 1295
bin: 6.75e1
variant carriers: 281

GenotypeQuality
all individuals: 1626
bin: 5.75e1
variant carriers: 334

GenotypeQuality
all individuals: 2152
bin: 7.5e0
variant carriers: 226

GenotypeQuality
all individuals: 1307
bin: 7.75e1
variant carriers: 210

GenotypeQuality
all individuals: 1313
bin: 7.25e1
variant carriers: 266

GenotypeQuality
all individuals: 1157
bin: 8.25e1
variant carriers: 184

GenotypeQuality
all individuals: 1019
bin: 9.25e1
variant carriers: 142

European (Finnish)
type: Population
allele count: 115
allele frequency: 3.495440729483282e-2
allele num: 3290
num of homozygotes: 0

South Asian
type: Population
allele count: 1026
allele frequency: 1.080454928390901e-1
allele num: 9496
num of homozygotes: 0

Other
type: Population
allele count: 35
allele frequency: 7.261410788381743e-2
allele num: 482
num of homozygotes: 0

East Asian
type: Population
allele count: 383
allele frequency: 8.684807256235828e-2
allele num: 4410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1702
allele frequency: 4.902356126504983e-2
allele num: 34718
num of homozygotes: 0

African
type: Population
allele count: 1426
allele frequency: 2.953603976801988e-1
allele num: 4828
num of homozygotes: 21

Latino
type: Population
allele count: 558
allele frequency: 1.026867868973132e-1
allele num: 5434
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-2

DP
type: SiteQuality
SIO_000300: 1.041298e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

QD
type: SiteQuality
SIO_000300: 8.23e0

GenotypeQuality
all individuals: 1520
bin: 4.25e1
variant carriers: 13

GenotypeQuality
all individuals: 2631
bin: 2.25e1
variant carriers: 11

GenotypeQuality
all individuals: 1590
bin: 5.25e1
variant carriers: 11

GenotypeQuality
all individuals: 1626
bin: 5.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1295
bin: 6.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1313
bin: 7.25e1
variant carriers: 11

GenotypeQuality
all individuals: 1718
bin: 3.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1013
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1341
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1307
bin: 7.75e1
variant carriers: 7

European (Finnish)
type: Population
allele count: 3
allele frequency: 9.11854103343465e-4
allele num: 3290
num of homozygotes: 0

African
type: Population
allele count: 48
allele frequency: 9.942004971002486e-3
allele num: 4828
num of homozygotes: 0

South Asian
type: Population
allele count: 22
allele frequency: 2.316764953664701e-3
allele num: 9496
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 1.587301587301587e-3
allele num: 4410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 9.21712080188951e-4
allele num: 34718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

Latino
type: Population
allele count: 18
allele frequency: 3.312476996687523e-3
allele num: 5434
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

QD
type: SiteQuality
SIO_000300: 8.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

DP
type: SiteQuality
SIO_000300: 1.041298e6

GenotypeQuality
all individuals: 1019
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1341
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2152
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 1626
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1706
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1520
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1544
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1590
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1295
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1013
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 7
allele frequency: 1.449875724937863e-3
allele num: 4828
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 6.318449873631002e-4
allele num: 9496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 2.304280200472377e-4
allele num: 34718
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 5.520794994479205e-4
allele num: 5434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3290
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

DP
type: SiteQuality
SIO_000300: 1.041298e6

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

QD
type: SiteQuality
SIO_000300: 8.23e0

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

GenotypeQuality
all individuals: 1013
bin: 8.75e1
variant carriers: 828

GenotypeQuality
all individuals: 1626
bin: 5.75e1
variant carriers: 1278

GenotypeQuality
all individuals: 1313
bin: 7.25e1
variant carriers: 1038

GenotypeQuality
all individuals: 1295
bin: 6.75e1
variant carriers: 987

GenotypeQuality
all individuals: 2152
bin: 7.5e0
variant carriers: 912

GenotypeQuality
all individuals: 1590
bin: 5.25e1
variant carriers: 1180

GenotypeQuality
all individuals: 1520
bin: 4.25e1
variant carriers: 1078

GenotypeQuality
all individuals: 1706
bin: 1.25e1
variant carriers: 961

GenotypeQuality
all individuals: 1718
bin: 3.25e1
variant carriers: 1131

GenotypeQuality
all individuals: 1341
bin: 6.25e1
variant carriers: 938

African
type: Population
allele count: 895
allele frequency: 1.853769676884839e-1
allele num: 4828
num of homozygotes: 8

Latino
type: Population
allele count: 2064
allele frequency: 3.798306956201693e-1
allele num: 5434
num of homozygotes: 47

East Asian
type: Population
allele count: 1754
allele frequency: 3.977324263038549e-1
allele num: 4410
num of homozygotes: 57

European (Non-Finnish)
type: Population
allele count: 15865
allele frequency: 4.569675672561784e-1
allele num: 34718
num of homozygotes: 902

South Asian
type: Population
allele count: 3721
allele frequency: 3.91849199663016e-1
allele num: 9496
num of homozygotes: 87

European (Finnish)
type: Population
allele count: 1512
allele frequency: 4.595744680851064e-1
allele num: 3290
num of homozygotes: 114

Other
type: Population
allele count: 204
allele frequency: 4.232365145228216e-1
allele num: 482
num of homozygotes: 10

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

DP
type: SiteQuality
SIO_000300: 1.041298e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

QD
type: SiteQuality
SIO_000300: 8.23e0

GenotypeQuality
all individuals: 1706
bin: 1.25e1
variant carriers: 67

GenotypeQuality
all individuals: 2152
bin: 7.5e0
variant carriers: 70

GenotypeQuality
all individuals: 1295
bin: 6.75e1
variant carriers: 19

GenotypeQuality
all individuals: 1313
bin: 7.25e1
variant carriers: 29

GenotypeQuality
all individuals: 2631
bin: 2.25e1
variant carriers: 54

GenotypeQuality
all individuals: 1590
bin: 5.25e1
variant carriers: 44

GenotypeQuality
all individuals: 1745
bin: 2.75e1
variant carriers: 49

GenotypeQuality
all individuals: 1157
bin: 8.25e1
variant carriers: 20

GenotypeQuality
all individuals: 1718
bin: 3.25e1
variant carriers: 66

GenotypeQuality
all individuals: 1019
bin: 9.25e1
variant carriers: 15

European (Non-Finnish)
type: Population
allele count: 424
allele frequency: 1.22126850625036e-2
allele num: 34718
num of homozygotes: 0

Latino
type: Population
allele count: 31
allele frequency: 5.704821494295178e-3
allele num: 5434
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 1.037344398340249e-2
allele num: 482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 21
allele frequency: 6.382978723404255e-3
allele num: 3290
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 2.071251035625518e-3
allele num: 4828
num of homozygotes: 0

East Asian
type: Population
allele count: 27
allele frequency: 6.122448979591836e-3
allele num: 4410
num of homozygotes: 0

South Asian
type: Population
allele count: 80
allele frequency: 8.424599831508003e-3
allele num: 9496
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

QD
type: SiteQuality
SIO_000300: 8.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

DP
type: SiteQuality
SIO_000300: 1.041298e6

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3290
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

DP
type: SiteQuality
SIO_000300: 1.041298e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

QD
type: SiteQuality
SIO_000300: 8.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-2

GenotypeQuality
all individuals: 3134
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 462
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 4.982561036372695e-4
allele num: 8028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1078
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2454
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.43e-1

FS
type: SiteQuality
SIO_000300: 9.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.136726e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.013e-1

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

GenotypeQuality
all individuals: 5237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6192
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8474
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5020
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3771
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.105972538118103e-5
allele num: 47484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9024
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6820
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.96e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.225922e6

FS
type: SiteQuality
SIO_000300: 1.207e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.086e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.039e0

VQSLOD
type: SiteQuality
SIO_000300: -9.756e-1

QD
type: SiteQuality
SIO_000300: 8.4e0

MQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1908
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.211945076236206e-5
allele num: 47484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9024
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.96e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.756e-1

DP
type: SiteQuality
SIO_000300: 1.225922e6

FS
type: SiteQuality
SIO_000300: 1.207e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.039e0

MQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.086e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.4e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.280839895013123e-4
allele num: 9144
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7968
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60202
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.333e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.925e1

MQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

FS
type: SiteQuality
SIO_000300: 9.83e0

DP
type: SiteQuality
SIO_000300: 1.248547e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 1.351e1

VQSLOD
type: SiteQuality
SIO_000300: 7.16e-1

GenotypeQuality
all individuals: 6786
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3244
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.980741134280781e-5
allele num: 60232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15120
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.252866e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

FS
type: SiteQuality
SIO_000300: 9.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

MQ
type: SiteQuality
SIO_000300: 5.596e1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

MQRankSum
type: SiteQuality
SIO_000300: -1.099e0

QD
type: SiteQuality
SIO_000300: 8.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
all individuals: 412
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2189
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7976
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.659145208388638e-5
allele num: 60272
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10724
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

DP
type: SiteQuality
SIO_000300: 1.259001e6

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 8.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.94e-1

FS
type: SiteQuality
SIO_000300: 1.558e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

GenotypeQuality
all individuals: 581
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2189
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variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.659145208388638e-5
allele num: 60272
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.253761283851555e-4
allele num: 7976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.090037061260083e-4
allele num: 9174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6054
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.259001e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

MQ
type: SiteQuality
SIO_000300: 5.869e1

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

FS
type: SiteQuality
SIO_000300: 1.558e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 411
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.634819532908705e-5
allele num: 15072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6056
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.92e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

DP
type: SiteQuality
SIO_000300: 1.265055e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 6.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.08e-1

FS
type: SiteQuality
SIO_000300: 3.605e0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.332222592469177e-5
allele num: 60020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.651254953764861e-4
allele num: 6056
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.256281407035176e-4
allele num: 7960
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.354536950420954e-5
allele num: 10690
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 6.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 3.605e0

DP
type: SiteQuality
SIO_000300: 1.265055e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.92e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1184
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5934
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.693078694297711e-5
allele num: 59064
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 14828
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.47e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.273095e6

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

FS
type: SiteQuality
SIO_000300: 1.314e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.556e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.76e-1

MQ
type: SiteQuality
SIO_000300: 5.996e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10536
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.104972375690608e-4
allele num: 9050
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5934
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.720798489344483e-4
allele num: 14828
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.265822784810127e-4
allele num: 7900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.015847216578627e-4
allele num: 59064
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.273095e6

FS
type: SiteQuality
SIO_000300: 1.314e1

VQSLOD
type: SiteQuality
SIO_000300: -2.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.76e-1

MQ
type: SiteQuality
SIO_000300: 5.996e1

QD
type: SiteQuality
SIO_000300: 1.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.556e0

GenotypeQuality
all individuals: 4659
bin: 3.75e1
variant carriers: 28

GenotypeQuality
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bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 215
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 2693
bin: 4.25e1
variant carriers: 22

GenotypeQuality
all individuals: 7775
bin: 2.25e1
variant carriers: 44

GenotypeQuality
all individuals: 9355
bin: 2.5e0
variant carriers: 45

GenotypeQuality
all individuals: 1540
bin: 5.75e1
variant carriers: 10

GenotypeQuality
all individuals: 2664
bin: 1.75e1
variant carriers: 53

GenotypeQuality
all individuals: 107
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 10206
bin: 6.25e1
variant carriers: 13

GenotypeQuality
all individuals: 1817
bin: 5.25e1
variant carriers: 10

African
type: Population
allele count: 47
allele frequency: 7.730263157894737e-3
allele num: 6080
num of homozygotes: 0

South Asian
type: Population
allele count: 87
allele frequency: 9.049303099646348e-3
allele num: 9614
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 9.584664536741214e-3
allele num: 626
num of homozygotes: 0

Latino
type: Population
allele count: 30
allele frequency: 3.776435045317221e-3
allele num: 7944
num of homozygotes: 0

East Asian
type: Population
allele count: 18
allele frequency: 2.875399361022364e-3
allele num: 6260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 82
allele frequency: 1.771287855877652e-3
allele num: 46294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.939655172413793e-3
allele num: 4640
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.2663e1

QD
type: SiteQuality
SIO_000300: 5.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.68e-2

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.472e0

MQRankSum
type: SiteQuality
SIO_000300: -1.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.68e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.797e0

DP
type: SiteQuality
SIO_000300: 1.307007e6

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4925
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 724
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4387
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11006
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.754810283069705e-5
allele num: 63094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15406
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.915e0

DP
type: SiteQuality
SIO_000300: 1.434307e6

VQSLOD
type: SiteQuality
SIO_000300: 6.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-1

FS
type: SiteQuality
SIO_000300: 7.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

QD
type: SiteQuality
SIO_000300: 8.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeQuality
all individuals: 1139
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4552
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1446
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 224
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.571684531480841e-5
allele num: 63626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15458
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.271e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 1.906e0

MQRankSum
type: SiteQuality
SIO_000300: -7.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.66e-1

DP
type: SiteQuality
SIO_000300: 1.456733e6

GenotypeQuality
all individuals: 3323
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1169
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1451
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 384
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555887478217575e-5
allele num: 64272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11150
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.025e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.489425e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 382
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4562
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3660
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6260
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.983111749910169e-5
allele num: 11132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15530
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.373e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

DP
type: SiteQuality
SIO_000300: 1.497095e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.82e-1

QD
type: SiteQuality
SIO_000300: 1.019e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.651e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

GenotypeQuality
all individuals: 269
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1440
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4516
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45457
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.568578240682645e-5
allele num: 63752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.174e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.33e-1

DP
type: SiteQuality
SIO_000300: 1.494584e6

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.301e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.09e-1

GenotypeQuality
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44858
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4486
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1441
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 377
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63532
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.807991321641656e-4
allele num: 11062
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.302e0

DP
type: SiteQuality
SIO_000300: 1.490286e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 7.85e0

VQSLOD
type: SiteQuality
SIO_000300: -2.359e-1

GenotypeQuality
all individuals: 10712
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37645
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3992
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.05999576001696e-4
allele num: 9434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8180
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.28e0

VQSLOD
type: SiteQuality
SIO_000300: -2.074e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e-2

DP
type: SiteQuality
SIO_000300: 1.396774e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.739e0

MQ
type: SiteQuality
SIO_000300: 5.884e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.67e0

GenotypeQuality
all individuals: 394
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32796
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 350
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.086248099065827e-4
allele num: 9206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56436
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

FS
type: SiteQuality
SIO_000300: 1.192e0

QD
type: SiteQuality
SIO_000300: 1.078e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.495e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 1.329598e6

VQSLOD
type: SiteQuality
SIO_000300: -4.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

GenotypeQuality
all individuals: 1041
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5418
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.051745898190997e-4
allele num: 9508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7604
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.794e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.17e-1

DP
type: SiteQuality
SIO_000300: 1.257861e6

VQSLOD
type: SiteQuality
SIO_000300: -2.112e0

FS
type: SiteQuality
SIO_000300: 4.536e0

QD
type: SiteQuality
SIO_000300: 1.402e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
all individuals: 597
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28007
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19631
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 7.25e1
variant carriers: 0