2-15523484-CAATT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15523484
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15523480
    reference: chr 2
allele count: 2
allele frequency: 1.67689573062347e-5
allele num: 119268
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3258-47_3258-44delAATT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.399-47_399-44delAATT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2898-47_2898-44delAATT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.401-47_401-44delAATT
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9833
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5823
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15633
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2507
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2506
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1712
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3277
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: CAATT
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-15523486-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15523486
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15523486
    reference: chr 2
allele count: 1
allele frequency: 8.38447865311735e-6
allele num: 119268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.399-45T>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.401-45T>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2898-45T>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3258-45T>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3646
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11669
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14917
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 3272
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1905
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5805
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1711
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

2-15533745-G-GTATGTCTACACAAATGAAAGCGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533745
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533768
    reference: chr 2
allele count: 1
allele frequency: 6.114711997064938e-5
allele num: 16354
alternate allele: GTATGTCTACACAAATGAAAGCGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1630
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum

2-15533757-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533757
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533757
    reference: chr 2
allele count: 28
allele frequency: 1.70961045304677e-3
allele num: 16378
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+594T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+594T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+594T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+594T>C
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 242
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 8.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

2-15533758-AACACTTGCAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533758
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533748
    reference: chr 2
allele count: 2
allele frequency: 1.221597849987784e-4
allele num: 16372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  variant of: http://identifiers.org/hgnc/15625
canonical: false
consequence: 3' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2303
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: AACACTTGCAT
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

2-15533759-A-ATGAAAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533759
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533765
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 16366
alternate allele: ATGAAAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+591_398+592insCTTTCA
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+591_2897+592insCTTTCA
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+591_3257+592insCTTTCA
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+591_400+592insCTTTCA
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2324
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

2-15533779-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533779
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533779
    reference: chr 2
allele count: 10223
allele frequency: 6.246486618599536e-1
allele num: 16366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+572C>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+572C>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+572C>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+572C>T
  variant of: http://identifiers.org/hgnc/15625
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.25e1
  variant carriers: 767
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 2.5e0
  variant carriers: 251
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 576
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 459
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.75e1
  variant carriers: 338
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 2.75e1
  variant carriers: 504
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 4.75e1
  variant carriers: 779
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.75e1
  variant carriers: 695
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 2.25e1
  variant carriers: 372
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.25e1
  variant carriers: 726
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 285
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.25e1
  variant carriers: 624
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 8.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 7.5e0
  variant carriers: 137
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 6.75e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 6.25e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.25e1
  variant carriers: 107
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 8.25e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 25
num of homozygotes: 3288
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/2-15533790-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533790
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533790
    reference: chr 2
allele count: 1
allele frequency: 6.67913438418381e-5
allele num: 14972
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+561T>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.611T>G
  hgvsp: ENSP00000391476.1:p.Ter205GluextTer?
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+561T>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+561T>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+561T>G
  variant of: http://identifiers.org/hgnc/15625
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ter205GluextTer?
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

2-15533800-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533800
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533800
    reference: chr 2
allele count: 111
allele frequency: 7.139181888345768e-3
allele num: 15548
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+551C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+551C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+551C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.601C>G
  hgvsp: ENST00000429842.1:c.601C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+551C>G
  variant of: http://identifiers.org/hgnc/15625
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1910
  bin: 9.75e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly201Gly
num of homozygotes: 2
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

2-15533828-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533828
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533828
    reference: chr 2
allele count: 1
allele frequency: 6.596306068601583e-5
allele num: 15160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+523T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.573T>C
  hgvsp: ENSP00000391476.1:p.Val192Ala
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+523T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+523T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+523T>C
  variant of: http://identifiers.org/hgnc/15625
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val192Ala
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

2-15533829-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533829
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533829
    reference: chr 2
allele count: 6
allele frequency: 3.961441964875215e-4
allele num: 15146
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+522G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+522G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.572G>A
  hgvsp: ENSP00000391476.1:p.Val192Met
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+522G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+522G>A
  variant of: http://identifiers.org/hgnc/15625
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val192Met
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

2-15533882-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533882
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533882
    reference: chr 2
allele count: 1
allele frequency: 7.075137965190322e-5
allele num: 14134
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+469A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+469A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+469A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.550-31A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+469A>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/2-15533884-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533884
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533884
    reference: chr 2
allele count: 8723
allele frequency: 6.203242781965581e-1
allele num: 14062
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+467G>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.550-33G>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+467G>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+467G>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+467G>T
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 2.25e1
  variant carriers: 328
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.75e1
  variant carriers: 567
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.25e1
  variant carriers: 341
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 4.75e1
  variant carriers: 640
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 248
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 2.5e0
  variant carriers: 412
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 275
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 789
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.5e0
  variant carriers: 425
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 893
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.25e1
  variant carriers: 447
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.25e1
  variant carriers: 825
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.25e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.5e0
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 7.5e0
  variant carriers: 256
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 1.75e1
  variant carriers: 134
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 6.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.25e1
  variant carriers: 154
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.75e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 6.75e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 60
num of homozygotes: 2783
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

2-15533884-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533884
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533884
    reference: chr 2
allele count: 1
allele frequency: 7.111363959607453e-5
allele num: 14062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+467G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.550-33G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+467G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+467G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+467G>A
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5205
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

2-15533895-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533895
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533895
    reference: chr 2
allele count: 8247
allele frequency: 5.97868638538495e-1
allele num: 13794
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+456T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+456T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.550-44T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+456T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+456T>C
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 489
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 2.75e1
  variant carriers: 969
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.25e1
  variant carriers: 356
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 147
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 2.5e0
  variant carriers: 441
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.5e0
  variant carriers: 443
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 1.75e1
  variant carriers: 423
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 2.25e1
  variant carriers: 729
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.75e1
  variant carriers: 832
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 3.25e1
  variant carriers: 1067
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 80
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 6.25e1
  variant carriers: 124
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 7.5e0
  variant carriers: 247
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 7.75e1
  variant carriers: 182
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.75e1
  variant carriers: 119
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 2.5e0
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.25e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 8.75e1
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.25e1
  variant carriers: 155
genotype quality: GenotypeQuality
  all individuals: 4786
  bin: 9.75e1
  variant carriers: 4589
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 123
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.25e1
  variant carriers: 90
num of homozygotes: 2563
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

2-15533896-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533896
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533896
    reference: chr 2
allele count: 3
allele frequency: 2.187545573866122e-4
allele num: 13714
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+455C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+455C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+455C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.550-45C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+455C>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

2-15533899-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15533899
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15533899
    reference: chr 2
allele count: 8318
allele frequency: 6.091095489162273e-1
allele num: 13656
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.550-48T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+452T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+452T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+452T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+452T>C
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.25e1
  variant carriers: 374
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 211
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.5e0
  variant carriers: 487
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 3.25e1
  variant carriers: 1055
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 2.5e0
  variant carriers: 476
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.75e1
  variant carriers: 696
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 2.25e1
  variant carriers: 889
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.25e1
  variant carriers: 394
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.75e1
  variant carriers: 516
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 2.75e1
  variant carriers: 1116
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 7.5e0
  variant carriers: 251
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.25e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 8.25e1
  variant carriers: 158
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 2.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 6.25e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 125
genotype quality: GenotypeQuality
  all individuals: 4800
  bin: 9.75e1
  variant carriers: 4629
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.25e1
  variant carriers: 91
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 1.75e1
  variant carriers: 124
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 55
num of homozygotes: 2612
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

2-15534331-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534331
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534331
    reference: chr 2
allele count: 2
allele frequency: 7.58552681483729e-5
allele num: 26366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+20G>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+20G>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+20G>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.549+20G>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+20G>C
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15589
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29079
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14907
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-15534334-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534334
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534334
    reference: chr 2
allele count: 1
allele frequency: 3.580892358375707e-5
allele num: 27926
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.549+17A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.398+17A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3257+17A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.400+17A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2897+17A>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12968
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4221
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30639
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/2-15534353-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534353
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534353
    reference: chr 2
allele count: 1
allele frequency: 2.03029195598327e-5
allele num: 49254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2895G>T
  hgvsp: ENST00000441750.1:c.2895G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3255G>T
  hgvsp: ENST00000281513.5:c.3255G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.398G>T
  hgvsp: ENST00000442506.1:c.398G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.396G>T
  hgvsp: ENST00000441755.1:c.396G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.547G>T
  hgvsp: ENST00000429842.1:c.547G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3221
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2815
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 2.75e1
  variant carriers: 0
hgvs: c.3255G>T
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-15534354-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534354
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534354
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 51836
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2894G>A
  hgvsp: ENSP00000413201.1:p.Arg965Gln
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.395G>A
  hgvsp: ENSP00000396501.1:p.Arg132Gln
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.546G>A
  hgvsp: ENSP00000391476.1:p.Arg183Gln
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3254G>A
  hgvsp: ENSP00000281513.5:p.Arg1085Gln
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.397G>A
  hgvsp: ENSP00000398411.1:p.Arg133Gln
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31598
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13870
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31013
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3224
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg1085Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

2-15534355-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534355
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534355
    reference: chr 2
allele count: 9
allele frequency: 1.583559137136221e-4
allele num: 56834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2893C>T
  hgvsp: ENSP00000413201.1:p.Arg965Trp
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.545C>T
  hgvsp: ENSP00000391476.1:p.Arg183Trp
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3253C>T
  hgvsp: ENSP00000281513.5:p.Arg1085Trp
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.394C>T
  hgvsp: ENSP00000396501.1:p.Arg132Trp
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.396C>T
  hgvsp: ENSP00000398411.1:p.Arg133Trp
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17160
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29350
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg1085Trp
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

2-15534361-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534361
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534361
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 67708
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.390A>G
  hgvsp: ENSP00000398411.1:p.Thr131Ala
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2887A>G
  hgvsp: ENSP00000413201.1:p.Thr963Ala
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3247A>G
  hgvsp: ENSP00000281513.5:p.Thr1083Ala
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.539A>G
  hgvsp: ENSP00000391476.1:p.Thr181Ala
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.388A>G
  hgvsp: ENSP00000396501.1:p.Thr130Ala
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25378
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3242
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19338
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 8.25e1
  variant carriers: 1
hgvs: p.Thr1083Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

2-15534362-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534362
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534362
    reference: chr 2
allele count: 2
allele frequency: 2.911716748194736e-5
allele num: 68688
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3246C>T
  hgvsp: ENST00000281513.5:c.3246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.538C>T
  hgvsp: ENST00000429842.1:c.538C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.387C>T
  hgvsp: ENST00000441755.1:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2886C>T
  hgvsp: ENST00000441750.1:c.2886C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.389C>T
  hgvsp: ENST00000442506.1:c.389C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24573
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3245
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2540
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His1082His
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

2-15534367-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534367
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534367
    reference: chr 2
allele count: 1
allele frequency: 1.329327626086725e-5
allele num: 75226
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.533A>G
  hgvsp: ENSP00000391476.1:p.Arg179Gly
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.384A>G
  hgvsp: ENSP00000398411.1:p.Arg129Gly
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2881A>G
  hgvsp: ENSP00000413201.1:p.Arg961Gly
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.382A>G
  hgvsp: ENSP00000396501.1:p.Arg128Gly
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3241A>G
  hgvsp: ENSP00000281513.5:p.Arg1081Gly
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22042
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21834
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21883
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg1081Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD

2-15534368-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534368
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534368
    reference: chr 2
allele count: 1
allele frequency: 1.307873397855088e-5
allele num: 76460
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2880G>A
  hgvsp: ENST00000441750.1:c.2880G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.381G>A
  hgvsp: ENST00000441755.1:c.381G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3240G>A
  hgvsp: ENST00000281513.5:c.3240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.383G>A
  hgvsp: ENST00000442506.1:c.383G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.532G>A
  hgvsp: ENST00000429842.1:c.532G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2932
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22167
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr1080Thr
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

2-15534370-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534370
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534370
    reference: chr 2
allele count: 1
allele frequency: 1.245174947080065e-5
allele num: 80310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2878A>G
  hgvsp: ENSP00000413201.1:p.Thr960Ala
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.381A>G
  hgvsp: ENSP00000398411.1:p.Thr128Ala
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.530A>G
  hgvsp: ENSP00000391476.1:p.Thr178Ala
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.379A>G
  hgvsp: ENSP00000396501.1:p.Thr127Ala
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3238A>G
  hgvsp: ENSP00000281513.5:p.Thr1080Ala
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25999
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3160
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23798
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3263
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr1080Ala
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

2-15534376-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534376
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534376
    reference: chr 2
allele count: 4
allele frequency: 4.545454545454545e-5
allele num: 88000
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.524A>C
  hgvsp: ENST00000429842.1:c.524A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.373A>C
  hgvsp: ENST00000441755.1:c.373A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3232A>C
  hgvsp: ENST00000281513.5:c.3232A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2872A>C
  hgvsp: ENST00000441750.1:c.2872A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.375A>C
  hgvsp: ENST00000442506.1:c.375A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29413
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27147
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg1078Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-15534379-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534379
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534379
    reference: chr 2
allele count: 1
allele frequency: 1.107959581634462e-5
allele num: 90256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2869G>T
  hgvsp: ENSP00000413201.1:p.Val957Phe
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.372G>T
  hgvsp: ENSP00000398411.1:p.Val125Phe
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3229G>T
  hgvsp: ENSP00000281513.5:p.Val1077Phe
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.521G>T
  hgvsp: ENSP00000391476.1:p.Val175Phe
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.370G>T
  hgvsp: ENSP00000396501.1:p.Val124Phe
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14935
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30198
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3266
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14974
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1057
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val1077Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-15534386-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534386
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534386
    reference: chr 2
allele count: 11
allele frequency: 1.15069983471766e-4
allele num: 95594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2862G>A
  hgvsp: ENST00000441750.1:c.2862G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3222G>A
  hgvsp: ENST00000281513.5:c.3222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.365G>A
  hgvsp: ENST00000442506.1:c.365G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.514G>A
  hgvsp: ENST00000429842.1:c.514G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.363G>A
  hgvsp: ENST00000441755.1:c.363G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31584
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12530
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys1074Lys
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

2-15534391-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534391
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534391
    reference: chr 2
allele count: 425
allele frequency: 4.216939196697888e-3
allele num: 100784
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2857C>T
  hgvsp: ENSP00000413201.1:p.Arg953Cys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.360C>T
  hgvsp: ENSP00000398411.1:p.Arg121Cys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.358C>T
  hgvsp: ENSP00000396501.1:p.Arg120Cys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.509C>T
  hgvsp: ENSP00000391476.1:p.Arg171Cys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3217C>T
  hgvsp: ENSP00000281513.5:p.Arg1073Cys
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 3.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 33233
  bin: 2.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9876
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 1.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 1.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 3.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 6889
  bin: 2.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 10048
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30922
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3673
  bin: 9.75e1
  variant carriers: 414
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 7.25e1
  variant carriers: 1
hgvs: p.Arg1073Cys
num of homozygotes: 3
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD

2-15534392-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534392
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534392
    reference: chr 2
allele count: 2
allele frequency: 1.961938395134393e-5
allele num: 101940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2856A>T
  hgvsp: ENST00000441750.1:c.2856A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.357A>T
  hgvsp: ENST00000441755.1:c.357A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.508A>T
  hgvsp: ENST00000429842.1:c.508A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3216A>T
  hgvsp: ENST00000281513.5:c.3216A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.359A>T
  hgvsp: ENST00000442506.1:c.359A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1643
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala1072Ala
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

2-15534401-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534401
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534401
    reference: chr 2
allele count: 2
allele frequency: 1.843216043352441e-5
allele num: 108506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.499A>G
  hgvsp: ENST00000429842.1:c.499A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3207A>G
  hgvsp: ENST00000281513.5:c.3207A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.350A>G
  hgvsp: ENST00000442506.1:c.350A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2847A>G
  hgvsp: ENST00000441750.1:c.2847A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.348A>G
  hgvsp: ENST00000441755.1:c.348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2211
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5056
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser1069Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

2-15534410-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534410
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534410
    reference: chr 2
allele count: 1
allele frequency: 8.667914846404549e-6
allele num: 115368
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3198A>G
  hgvsp: ENST00000281513.5:c.3198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.490A>G
  hgvsp: ENST00000429842.1:c.490A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2838A>G
  hgvsp: ENST00000441750.1:c.2838A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.339A>G
  hgvsp: ENST00000441755.1:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.341A>G
  hgvsp: ENST00000442506.1:c.341A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2966
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38737
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2404
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln1066Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

2-15534413-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534413
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534413
    reference: chr 2
allele count: 2
allele frequency: 1.716708726030454e-5
allele num: 116502
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2835T>C
  hgvsp: ENST00000441750.1:c.2835T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3195T>C
  hgvsp: ENST00000281513.5:c.3195T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.487T>C
  hgvsp: ENST00000429842.1:c.487T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.338T>C
  hgvsp: ENST00000442506.1:c.338T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.336T>C
  hgvsp: ENST00000441755.1:c.336T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39934
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9430
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39506
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5659
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr1065Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

2-15534428-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534428
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534428
    reference: chr 2
allele count: 5
allele frequency: 4.196884233145313e-5
allele num: 119136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2820A>G
  hgvsp: ENST00000441750.1:c.2820A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.472A>G
  hgvsp: ENST00000429842.1:c.472A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.323A>G
  hgvsp: ENST00000442506.1:c.323A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.321A>G
  hgvsp: ENST00000441755.1:c.321A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3180A>G
  hgvsp: ENST00000281513.5:c.3180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41207
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2512
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser1060Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD

2-15534433-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534433
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534433
    reference: chr 2
allele count: 3
allele frequency: 2.507899884636605e-5
allele num: 119622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2815A>G
  hgvsp: ENSP00000413201.1:p.Ile939Val
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3175A>G
  hgvsp: ENSP00000281513.5:p.Ile1059Val
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.318A>G
  hgvsp: ENSP00000398411.1:p.Ile107Val
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.316A>G
  hgvsp: ENSP00000396501.1:p.Ile106Val
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.467A>G
  hgvsp: ENSP00000391476.1:p.Ile157Val
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41041
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5928
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3454
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile1059Val
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD

2-15534442-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534442
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534442
    reference: chr 2
allele count: 5
allele frequency: 4.165972337943676e-5
allele num: 120020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2806G>A
  hgvsp: ENSP00000413201.1:p.Glu936Lys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.458G>A
  hgvsp: ENSP00000391476.1:p.Glu154Lys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.307G>A
  hgvsp: ENSP00000396501.1:p.Glu103Lys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3166G>A
  hgvsp: ENSP00000281513.5:p.Glu1056Lys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.309G>A
  hgvsp: ENSP00000398411.1:p.Glu104Lys
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41923
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2528
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5961
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3457
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu1056Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

2-15534443-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534443
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534443
    reference: chr 2
allele count: 2
allele frequency: 1.665528555487084e-5
allele num: 120082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.457C>T
  hgvsp: ENST00000429842.1:c.457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.308C>T
  hgvsp: ENST00000442506.1:c.308C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.306C>T
  hgvsp: ENST00000441755.1:c.306C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3165C>T
  hgvsp: ENST00000281513.5:c.3165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2805C>T
  hgvsp: ENST00000441750.1:c.2805C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3453
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu1055Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

2-15534445-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534445
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534445
    reference: chr 2
allele count: 1
allele frequency: 8.321544478655239e-6
allele num: 120170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.304C>T
  hgvsp: ENSP00000396501.1:p.Leu102Phe
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2803C>T
  hgvsp: ENSP00000413201.1:p.Leu935Phe
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.455C>T
  hgvsp: ENSP00000391476.1:p.Leu153Phe
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3163C>T
  hgvsp: ENSP00000281513.5:p.Leu1055Phe
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.306C>T
  hgvsp: ENSP00000398411.1:p.Leu103Phe
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41125
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42063
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3453
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu1055Phe
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

2-15534450-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534450
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534450
    reference: chr 2
allele count: 1
allele frequency: 8.314487162431821e-6
allele num: 120272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.301A>G
  hgvsp: ENSP00000398411.1:p.His101Arg
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2798A>G
  hgvsp: ENSP00000413201.1:p.His933Arg
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3158A>G
  hgvsp: ENSP00000281513.5:p.His1053Arg
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.299A>G
  hgvsp: ENSP00000396501.1:p.His100Arg
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.450A>G
  hgvsp: ENSP00000391476.1:p.His151Arg
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 2555
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6012
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His1053Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

2-15534458-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534458
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534458
    reference: chr 2
allele count: 1
allele frequency: 8.304268393954492e-6
allele num: 120420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2790G>A
  hgvsp: ENST00000441750.1:c.2790G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.293G>A
  hgvsp: ENST00000442506.1:c.293G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.291G>A
  hgvsp: ENST00000441755.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3150G>A
  hgvsp: ENST00000281513.5:c.3150G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.442G>A
  hgvsp: ENST00000429842.1:c.442G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3454
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42112
  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2159
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu1050Leu
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

2-15534466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534466
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534466
    reference: chr 2
allele count: 1
allele frequency: 8.303854649328218e-6
allele num: 120426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.283G>A
  hgvsp: ENSP00000396501.1:p.Glu95Lys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.285G>A
  hgvsp: ENSP00000398411.1:p.Glu96Lys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.434G>A
  hgvsp: ENSP00000391476.1:p.Glu146Lys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2782G>A
  hgvsp: ENSP00000413201.1:p.Glu928Lys
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3142G>A
  hgvsp: ENSP00000281513.5:p.Glu1048Lys
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
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genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42120
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2572
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu1048Lys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

2-15534472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534472
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534472
    reference: chr 2
allele count: 10
allele frequency: 8.308822307526131e-5
allele num: 120354
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3136G>A
  hgvsp: ENSP00000281513.5:p.Val1046Met
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2776G>A
  hgvsp: ENSP00000413201.1:p.Val926Met
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.428G>A
  hgvsp: ENSP00000391476.1:p.Val144Met
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.277G>A
  hgvsp: ENSP00000396501.1:p.Val93Met
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.279G>A
  hgvsp: ENSP00000398411.1:p.Val94Met
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40647
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10768
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2565
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6009
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val1046Met
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

2-15534481-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534481
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534481
    reference: chr 2
allele count: 86
allele frequency: 7.149032386779278e-4
allele num: 120296
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-8A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-8A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-8A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-8A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-8A>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10820
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3538
  bin: 9.75e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 41327
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5980
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: c.3135-8A>G
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-15534489-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534489
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534489
    reference: chr 2
allele count: 1
allele frequency: 8.318637074501714e-6
allele num: 120212
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-16C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-16C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-16C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-16C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-16C>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3472
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41041
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

2-15534495-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534495
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534495
    reference: chr 2
allele count: 2
allele frequency: 1.664863065012903e-5
allele num: 120130
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-22A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-22A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-22A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-22A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-22A>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39187
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3474
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5943
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2557
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

2-15534500-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534500
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534500
    reference: chr 2
allele count: 1
allele frequency: 8.325840077263796e-6
allele num: 120108
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-27A>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-27A>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-27A>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-27A>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-27A>C
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5932
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39675
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

2-15534502-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534502
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534502
    reference: chr 2
allele count: 2
allele frequency: 1.665861500274867e-5
allele num: 120058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-29A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-29A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-29A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-29A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-29A>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1754
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-15534503-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534503
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534503
    reference: chr 2
allele count: 1
allele frequency: 8.330278897737497e-6
allele num: 120044
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-30G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-30G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-30G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-30G>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-30G>A
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39039
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1752
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5905
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

2-15534504-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534504
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534504
    reference: chr 2
allele count: 1
allele frequency: 8.3301401129567e-6
allele num: 120046
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-31A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-31A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-31A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-31A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-31A>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38880
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

2-15534509-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534509
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534509
    reference: chr 2
allele count: 189
allele frequency: 1.575393848462115e-3
allele num: 119970
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-36T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-36T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-36T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-36T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-36T>C
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36653
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 10517
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2894
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5854
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2540
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 2
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS

http://identifiers.org/exac.variant/2-15534515-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534515
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534513
    reference: chr 2
allele count: 22
allele frequency: 1.835566606037345e-4
allele num: 119854
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-44_3135-43delTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-44_2775-43delTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-44_427-43delTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-44_276-43delTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-44_278-43delTT
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35905
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2553
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1757
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2126
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: CAA
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/2-15534515-CAAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534515
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534511
    reference: chr 2
allele count: 2
allele frequency: 1.668696914579405e-5
allele num: 119854
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-46_278-43delTTTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-46_3135-43delTTTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-46_276-43delTTTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-46_427-43delTTTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-46_2775-43delTTTT
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2553
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1757
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2126
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CAAAA
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

2-15534523-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15534523
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15534523
    reference: chr 2
allele count: 1
allele frequency: 8.35282325425994e-6
allele num: 119720
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3135-50C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.427-50C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.276-50C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2775-50C>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.278-50C>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5820
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3549
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2290
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

2-15536504-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536504
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536504
    reference: chr 2
allele count: 4
allele frequency: 4.513959419504819e-5
allele num: 88614
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+33T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+33T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+33T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+33T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+33T>C
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18513
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7566
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16196
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4945
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7453
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

2-15536505-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536505
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536505
    reference: chr 2
allele count: 1
allele frequency: 1.124277651608841e-5
allele num: 88946
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+32A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+32A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+32A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+32A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+32A>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6480
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4649
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7344
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5090
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1333
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4944
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1310
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8250
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

2-15536508-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536508
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536509
    reference: chr 2
allele count: 305
allele frequency: 3.406222778137634e-3
allele num: 89542
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+28dupC
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+28dupC
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+28dupC
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+28dupC
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+28dupC
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 12811
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 2.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 1.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 18020
  bin: 1.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 2.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5194
  bin: 9.75e1
  variant carriers: 286
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8047
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4465
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4950
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1734
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15682
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 1
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

2-15536509-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536509
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536510
    reference: chr 2
allele count: 10665
allele frequency: 2.259246705927213e-1
allele num: 47206
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+27dupT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+27dupT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+27dupT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+27dupT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+27dupT
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 682
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 752
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 7.5e0
  variant carriers: 304
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 3.25e1
  variant carriers: 699
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 5.25e1
  variant carriers: 576
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 12531
  bin: 1.25e1
  variant carriers: 1762
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 2.75e1
  variant carriers: 1023
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 2.25e1
  variant carriers: 2183
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 13209
  bin: 1.75e1
  variant carriers: 2853
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 3.75e1
  variant carriers: 683
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 9.75e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 400
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 724
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.25e1
  variant carriers: 281
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 241
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 6.25e1
  variant carriers: 476
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 1.25e1
  variant carriers: 551
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 5.25e1
  variant carriers: 691
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 4.75e1
  variant carriers: 667
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 7.25e1
  variant carriers: 426
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 5.75e1
  variant carriers: 610
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 3.75e1
  variant carriers: 935
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 1.75e1
  variant carriers: 525
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 2.75e1
  variant carriers: 917
genotype quality: GenotypeQuality
  all individuals: 25865
  bin: 2.5e0
  variant carriers: 287
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 6.75e1
  variant carriers: 482
genotype quality: GenotypeQuality
  all individuals: 2957
  bin: 7.5e0
  variant carriers: 391
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

2-15536509-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536509
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536510
    reference: chr 2
allele count: 843
allele frequency: 1.785789941956531e-2
allele num: 47206
alternate allele: GC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+27_3134+28insG
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+27_275+28insG
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+27_426+28insG
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+27_2774+28insG
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+27_277+28insG
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 7.5e0
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 12531
  bin: 1.25e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 3.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 2.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 13209
  bin: 1.75e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 2.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 3.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 9.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 5269
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 4.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 7.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 25865
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2957
  bin: 7.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 4.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 5.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 17
num of homozygotes: 7
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

2-15536509-G-GCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536509
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536511
    reference: chr 2
allele count: 9
allele frequency: 1.906537304579926e-4
allele num: 47206
alternate allele: GCA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+27_275+28insTG
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+27_277+28insTG
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+27_426+28insTG
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+27_2774+28insTG
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+27_3134+28insTG
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12531
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4646
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25865
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5269
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2957
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

2-15536509-G-GAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536509
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536511
    reference: chr 2
allele count: 93
allele frequency: 1.970088548065924e-3
allele num: 47206
alternate allele: GAA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+26_3134+27dupTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+26_2774+27dupTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+26_277+27dupTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+26_275+27dupTT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+26_426+27dupTT
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 7.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 13209
  bin: 1.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 2.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 12531
  bin: 1.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 3.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 1.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 1.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 25865
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 5269
  bin: 2.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 4.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2957
  bin: 7.5e0
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 5.25e1
  variant carriers: 8
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD

2-15536509-G-GGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536509
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536511
    reference: chr 2
allele count: 9
allele frequency: 1.906537304579926e-4
allele num: 47206
alternate allele: GGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+27_277+28insTC
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+27_275+28insTC
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+27_3134+28insTC
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+27_426+28insTC
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+27_2774+28insTC
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12531
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13209
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25865
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4646
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5269
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2957
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

2-15536509-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536509
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536508
    reference: chr 2
allele count: 1831
allele frequency: 3.878744227428717e-2
allele num: 47206
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+27delT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+27delT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+27delT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+27delT
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+27delT
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 3.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 2.25e1
  variant carriers: 370
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12531
  bin: 1.25e1
  variant carriers: 282
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 2.75e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 13209
  bin: 1.75e1
  variant carriers: 402
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 3.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 7.5e0
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 9.75e1
  variant carriers: 617
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 5.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 6.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 1.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 4.25e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 2.75e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 2957
  bin: 7.5e0
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 8.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 1.25e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 7.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 7.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 25865
  bin: 2.5e0
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 6.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 3.75e1
  variant carriers: 97
num of homozygotes: 2
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: GA
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/2-15536510-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536510
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536510
    reference: chr 2
allele count: 16
allele frequency: 7.243096423721141e-4
allele num: 22090
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+27T>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+27T>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+27T>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+27T>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+27T>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10815
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11958
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9593
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 35921
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1863
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4927
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 1.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

2-15536510-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536510
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536510
    reference: chr 2
allele count: 6
allele frequency: 2.716161158895428e-4
allele num: 22090
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+27T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+27T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+27T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+27T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+27T>C
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9593
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11958
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10815
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1863
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35921
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

2-15536511-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536511
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536511
    reference: chr 2
allele count: 2
allele frequency: 2.405754564919287e-5
allele num: 83134
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+26T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+26T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+26T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+26T>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+26T>C
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7457
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6098
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12025
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2198
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3089
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7772
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7969
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7764
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3469
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2456
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS

2-15536516-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536516
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536516
    reference: chr 2
allele count: 1
allele frequency: 9.270246217739544e-6
allele num: 107872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+21T>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+21T>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+21T>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+21T>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+21T>A
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9999
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4587
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17803
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8187
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4690
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3898
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2186
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4473
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-15536520-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536520
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536520
    reference: chr 2
allele count: 1
allele frequency: 9.267668810587385e-6
allele num: 107902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+17T>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+17T>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+17T>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+17T>A
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+17T>A
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15151
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7901
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4687
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2577
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3886
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/2-15536521-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536521
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536521
    reference: chr 2
allele count: 1
allele frequency: 9.340731192437744e-6
allele num: 107058
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+16G>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+16G>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+16G>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+16G>T
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+16G>T
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4680
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4054
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3760
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4099
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7522
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

2-15536521-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536521
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536519
    reference: chr 2
allele count: 1
allele frequency: 9.340731192437744e-6
allele num: 107058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+14_277+15delCA
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+14_2774+15delCA
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+14_426+15delCA
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+14_3134+15delCA
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+14_275+15delCA
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4054
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7522
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21709
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: CTG
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

2-15536522-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536522
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536522
    reference: chr 2
allele count: 454
allele frequency: 4.185103244837758e-3
allele num: 108480
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+15A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+15A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+15A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+15A>G
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+15A>G
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9132
  bin: 1.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 3.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 1.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 3.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 7.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9366
  bin: 2.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16135
  bin: 2.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 9.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 8.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3903
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7512
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3898
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22730
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 2
num of homozygotes: 10
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS

2-15536522-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536522
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536522
    reference: chr 2
allele count: 1
allele frequency: 9.218289085545723e-6
allele num: 108480
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3134+15A>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2774+15A>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.426+15A>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.275+15A>C
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.277+15A>C
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1721
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7512
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5006
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP

2-15536557-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 15536557
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 15536557
    reference: chr 2
allele count: 4
allele frequency: 3.491620111731843e-5
allele num: 114560
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000398411
  ensembl transcript: ENST00000442506
  gene symbol: NBAS
  hgvsc: ENST00000442506.1:c.257C>G
  hgvsp: ENSP00000398411.1:p.Asp86Glu
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000391476
  ensembl transcript: ENST00000429842
  gene symbol: NBAS
  hgvsc: ENST00000429842.1:c.406C>G
  hgvsp: ENSP00000391476.1:p.Asp136Glu
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000413201
  ensembl transcript: ENST00000441750
  gene symbol: NBAS
  hgvsc: ENST00000441750.1:c.2754C>G
  hgvsp: ENSP00000413201.1:p.Asp918Glu
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000281513
  ensembl transcript: ENST00000281513
  gene symbol: NBAS
  hgvsc: ENST00000281513.5:c.3114C>G
  hgvsp: ENSP00000281513.5:p.Asp1038Glu
  variant of: http://identifiers.org/hgnc/15625
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151779
  ensembl protein: ENSP00000396501
  ensembl transcript: ENST00000441755
  gene symbol: NBAS
  hgvsc: ENST00000441755.1:c.255C>G
  hgvsp: ENSP00000396501.1:p.Asp85Glu
  variant of: http://identifiers.org/hgnc/15625
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4725
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28052
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39033
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4629
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Asp1038Glu
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 1475
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11670
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2467
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.04627288512505e-5
allele num: 65654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8310
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 1.937234e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.472e1

MQ
type: SiteQuality
SIO_000300: 5.447e1

MQRankSum
type: SiteQuality
SIO_000300: -1.812e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.23e-1

GenotypeQuality
all individuals: 1138
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2913
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.204238921001927e-4
allele num: 8304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.929e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.85e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.93008e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

QD
type: SiteQuality
SIO_000300: 1.903e1

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.66e-1

GenotypeQuality
all individuals: 166
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 4.807692307692308e-3
allele num: 208
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 914
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.66e-2

MQ
type: SiteQuality
SIO_000300: 4.431e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.19e-1

DP
type: SiteQuality
SIO_000300: 2.75973e5

VQSLOD
type: SiteQuality
SIO_000300: -1.436e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

GenotypeQuality
all individuals: 244
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.885369532428356e-4
allele num: 5304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

African
type: Population
allele count: 27
allele frequency: 2.973568281938326e-2
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.82304e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.021e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

QD
type: SiteQuality
SIO_000300: 1.649e1

VQSLOD
type: SiteQuality
SIO_000300: -2.439e-1

FS
type: SiteQuality
SIO_000300: 6.065e0

MQ
type: SiteQuality
SIO_000300: 5.674e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
all individuals: 149
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.887504718761797e-4
allele num: 5298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 6.305170239596469e-4
allele num: 1586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.38e0

QD
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.395e1

DP
type: SiteQuality
SIO_000300: 2.82723e5

VQSLOD
type: SiteQuality
SIO_000300: -3.668e-1

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 910
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 4.712e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

DP
type: SiteQuality
SIO_000300: 2.82814e5

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 115

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 74

GenotypeQuality
all individuals: 6280
bin: 9.75e1
variant carriers: 6117

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 15

GenotypeQuality
all individuals: 188
bin: 7.75e1
variant carriers: 83

South Asian
type: Population
allele count: 4674
allele frequency: 6.105015673981191e-1
allele num: 7656
num of homozygotes: 1459

European (Non-Finnish)
type: Population
allele count: 3704
allele frequency: 6.988679245283019e-1
allele num: 5300
num of homozygotes: 1308

European (Finnish)
type: Population
allele count: 896
allele frequency: 5.871559633027523e-1
allele num: 1526
num of homozygotes: 260

East Asian
type: Population
allele count: 111
allele frequency: 2.293388429752066e-1
allele num: 484
num of homozygotes: 13

Latino
type: Population
allele count: 178
allele frequency: 6.180555555555556e-1
allele num: 288
num of homozygotes: 56

African
type: Population
allele count: 536
allele frequency: 5.916114790286976e-1
allele num: 906
num of homozygotes: 159

Other
type: Population
allele count: 124
allele frequency: 6.019417475728155e-1
allele num: 206
num of homozygotes: 33

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.374e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.254e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.176e0

QD
type: SiteQuality
SIO_000300: 2.173e1

MQRankSum
type: SiteQuality
SIO_000300: -1.637e0

VQSLOD
type: SiteQuality
SIO_000300: 6.95e0

DP
type: SiteQuality
SIO_000300: 3.86588e5

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1945
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 400
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.103491796381994e-4
allele num: 4754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 938
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.414e0

QD
type: SiteQuality
SIO_000300: 1.349e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.59e0

MQ
type: SiteQuality
SIO_000300: 5.228e1

FS
type: SiteQuality
SIO_000300: 2.649e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.36e0

DP
type: SiteQuality
SIO_000300: 3.28524e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.59e-2

GenotypeQuality
all individuals: 597
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 82
allele frequency: 1.074423480083857e-2
allele num: 7632
num of homozygotes: 2

African
type: Population
allele count: 25
allele frequency: 2.886836027713626e-2
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.166666666666667e-3
allele num: 480
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 7.2992700729927e-3
allele num: 274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1030
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.036e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.403e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.42e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

QD
type: SiteQuality
SIO_000300: 1.206e1

FS
type: SiteQuality
SIO_000300: 1.137e0

DP
type: SiteQuality
SIO_000300: 3.20968e5

MQ
type: SiteQuality
SIO_000300: 5.833e1

GenotypeQuality
all individuals: 74
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2055
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.16822429906542e-3
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.82e-2

FS
type: SiteQuality
SIO_000300: 3.245e0

MQ
type: SiteQuality
SIO_000300: 5.455e1

QD
type: SiteQuality
SIO_000300: 1.25e1

DP
type: SiteQuality
SIO_000300: 3.09225e5

VQSLOD
type: SiteQuality
SIO_000300: -1.342e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.16e-1

GenotypeQuality
all individuals: 1398
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2060
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 7.84313725490196e-4
allele num: 7650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.23e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.65e-2

DP
type: SiteQuality
SIO_000300: 3.09412e5

VQSLOD
type: SiteQuality
SIO_000300: -9.439e-1

MQ
type: SiteQuality
SIO_000300: 5.565e1

QD
type: SiteQuality
SIO_000300: 1.037e1

GenotypeQuality
all individuals: 1824
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1120
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.100840336134454e-4
allele num: 4760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.75e-2

DP
type: SiteQuality
SIO_000300: 2.94083e5

MQRankSum
type: SiteQuality
SIO_000300: 2.31e0

VQSLOD
type: SiteQuality
SIO_000300: -1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

FS
type: SiteQuality
SIO_000300: 3.013e0

QD
type: SiteQuality
SIO_000300: 1.78e1

MQ
type: SiteQuality
SIO_000300: 5.688e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.49e0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 53

GenotypeQuality
all individuals: 127
bin: 1.25e1
variant carriers: 104

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 171

GenotypeQuality
all individuals: 5205
bin: 9.75e1
variant carriers: 5039

GenotypeQuality
all individuals: 105
bin: 7.25e1
variant carriers: 49

African
type: Population
allele count: 450
allele frequency: 5.936675461741425e-1
allele num: 758
num of homozygotes: 130

European (Non-Finnish)
type: Population
allele count: 3295
allele frequency: 6.972069403300889e-1
allele num: 4726
num of homozygotes: 1155

South Asian
type: Population
allele count: 4551
allele frequency: 5.992889122991836e-1
allele num: 7594
num of homozygotes: 1392

Latino
type: Population
allele count: 161
allele frequency: 6.24031007751938e-1
allele num: 258
num of homozygotes: 50

East Asian
type: Population
allele count: 105
allele frequency: 2.312775330396476e-1
allele num: 454
num of homozygotes: 12

European (Finnish)
type: Population
allele count: 67
allele frequency: 5.677966101694916e-1
allele num: 118
num of homozygotes: 18

Other
type: Population
allele count: 94
allele frequency: 6.103896103896104e-1
allele num: 154
num of homozygotes: 26

FS
type: SiteQuality
SIO_000300: 8.2e-1

DP
type: SiteQuality
SIO_000300: 2.87792e5

MQRankSum
type: SiteQuality
SIO_000300: -1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

QD
type: SiteQuality
SIO_000300: 2.409e1

VQSLOD
type: SiteQuality
SIO_000300: 1.002e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.694e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

MQ
type: SiteQuality
SIO_000300: 5.38e1

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4726
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.316829075585989e-4
allele num: 7594
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

MQRankSum
type: SiteQuality
SIO_000300: -1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.694e-1

FS
type: SiteQuality
SIO_000300: 8.2e-1

QD
type: SiteQuality
SIO_000300: 2.409e1

VQSLOD
type: SiteQuality
SIO_000300: 1.002e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

DP
type: SiteQuality
SIO_000300: 2.87792e5

MQ
type: SiteQuality
SIO_000300: 5.38e1

GenotypeQuality
all individuals: 286
bin: 6.75e1
variant carriers: 155

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 42

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 65

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 31

GenotypeQuality
all individuals: 227
bin: 9.25e1
variant carriers: 189

Other
type: Population
allele count: 88
allele frequency: 5.945945945945946e-1
allele num: 148
num of homozygotes: 24

African
type: Population
allele count: 363
allele frequency: 5.084033613445378e-1
allele num: 714
num of homozygotes: 91

Latino
type: Population
allele count: 143
allele frequency: 5.813008130081301e-1
allele num: 246
num of homozygotes: 41

European (Finnish)
type: Population
allele count: 29
allele frequency: 4.677419354838709e-1
allele num: 62
num of homozygotes: 5

South Asian
type: Population
allele count: 4348
allele frequency: 5.742208135235076e-1
allele num: 7572
num of homozygotes: 1275

European (Non-Finnish)
type: Population
allele count: 3199
allele frequency: 6.954347826086956e-1
allele num: 4600
num of homozygotes: 1118

East Asian
type: Population
allele count: 77
allele frequency: 1.703539823008849e-1
allele num: 452
num of homozygotes: 9

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.638e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.076e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.356e1

QD
type: SiteQuality
SIO_000300: 3.109e1

VQSLOD
type: SiteQuality
SIO_000300: 9.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.62e-1

DP
type: SiteQuality
SIO_000300: 2.40354e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.82e-1

GenotypeQuality
all individuals: 229
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.965107057890563e-4
allele num: 7566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.958e0

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

DP
type: SiteQuality
SIO_000300: 2.29701e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.69e-2

QD
type: SiteQuality
SIO_000300: 1.683e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.99e-1

MQ
type: SiteQuality
SIO_000300: 5.723e1

VQSLOD
type: SiteQuality
SIO_000300: -9.239000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

GenotypeQuality
all individuals: 273
bin: 6.75e1
variant carriers: 157

GenotypeQuality
all individuals: 283
bin: 7.75e1
variant carriers: 186

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 84

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 102

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 198

Other
type: Population
allele count: 89
allele frequency: 6.013513513513513e-1
allele num: 148
num of homozygotes: 24

European (Finnish)
type: Population
allele count: 24
allele frequency: 4.615384615384616e-1
allele num: 52
num of homozygotes: 5

South Asian
type: Population
allele count: 4439
allele frequency: 5.874801482265749e-1
allele num: 7556
num of homozygotes: 1330

East Asian
type: Population
allele count: 102
allele frequency: 2.266666666666667e-1
allele num: 450
num of homozygotes: 12

African
type: Population
allele count: 389
allele frequency: 5.621387283236994e-1
allele num: 692
num of homozygotes: 107

European (Non-Finnish)
type: Population
allele count: 3133
allele frequency: 6.934484285081894e-1
allele num: 4518
num of homozygotes: 1093

Latino
type: Population
allele count: 142
allele frequency: 5.916666666666667e-1
allele num: 240
num of homozygotes: 41

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

DP
type: SiteQuality
SIO_000300: 2.27844e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.321e1

VQSLOD
type: SiteQuality
SIO_000300: 9.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.573e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.021e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

MQ
type: SiteQuality
SIO_000300: 5.357e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-1

GenotypeQuality
all individuals: 355
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3848
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.665278934221482e-4
allele num: 12010
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2832
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

QD
type: SiteQuality
SIO_000300: 1.554e1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 6.34211e5

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeQuality
all individuals: 1060
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1108
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 972
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.52112676056338e-3
allele num: 284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12774
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

DP
type: SiteQuality
SIO_000300: 6.53279e5

VQSLOD
type: SiteQuality
SIO_000300: -2.081e-1

FS
type: SiteQuality
SIO_000300: 6.581e0

QD
type: SiteQuality
SIO_000300: 1.228e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.43e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

GenotypeQuality
all individuals: 340
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32126
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1659
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12997
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10522
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.705627705627706e-4
allele num: 3696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3172
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.793e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.60234e5

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 1.239e1

VQSLOD
type: SiteQuality
SIO_000300: 8.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

GenotypeQuality
all individuals: 192
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1753
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10758
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

DP
type: SiteQuality
SIO_000300: 8.81742e5

MQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.83e-1

QD
type: SiteQuality
SIO_000300: 1.261e1

GenotypeQuality
all individuals: 261
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16000
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 2.216475803472479e-4
allele num: 27070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4790
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.685284640171858e-4
allele num: 11172
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1444e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.023e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.20352e5

ClippingRankSum
type: SiteQuality
SIO_000300: -8.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.43e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25038
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33132
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

QD
type: SiteQuality
SIO_000300: 1.195e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

DP
type: SiteQuality
SIO_000300: 9.9906e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 683
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19689
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1128
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.937537109606935e-5
allele num: 33684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.596e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-1

QD
type: SiteQuality
SIO_000300: 1.497e1

VQSLOD
type: SiteQuality
SIO_000300: 2.82e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

DP
type: SiteQuality
SIO_000300: 1.007858e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1222
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3253
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 421
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2942
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7142
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.384657989476599e-4
allele num: 7222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.173e0

VQSLOD
type: SiteQuality
SIO_000300: 3.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 1.057151e6

MQRankSum
type: SiteQuality
SIO_000300: -9.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.136e1

GenotypeQuality
all individuals: 867
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3253
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 935
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.860399308284861e-5
allele num: 12722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4846
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.93e-1

DP
type: SiteQuality
SIO_000300: 1.070339e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.143e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.176e0

QD
type: SiteQuality
SIO_000300: 1.25e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.72e-1

GenotypeQuality
all individuals: 187
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19590
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5044
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40372
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.296008294453084e-4
allele num: 7716
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.581e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.61e-1

DP
type: SiteQuality
SIO_000300: 1.098642e6

QD
type: SiteQuality
SIO_000300: 9.199999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

VQSLOD
type: SiteQuality
SIO_000300: -1.107e-1

GenotypeQuality
all individuals: 648
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16089
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3268
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3517
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.926972047416947e-4
allele num: 13666
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 1.821e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
SIO_000300: 7.5e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

DP
type: SiteQuality
SIO_000300: 1.16174e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.367e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

GenotypeQuality
all individuals: 495
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3594
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.210067763794773e-4
allele num: 8264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8878
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

DP
type: SiteQuality
SIO_000300: 1.182381e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.485e0

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.233e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

GenotypeQuality
all individuals: 787
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4032
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28168
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1055
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49928
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.598372566114502e-3
allele num: 6882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5676
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.799e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.83e-1

QD
type: SiteQuality
SIO_000300: 1.38e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

DP
type: SiteQuality
SIO_000300: 1.232082e6

GenotypeQuality
all individuals: 103
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4405
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1280
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.022494887525562e-3
allele num: 5868
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 8.972633467922835e-4
allele num: 8916
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.778337531486146e-3
allele num: 794
num of homozygotes: 0

Latino
type: Population
allele count: 23
allele frequency: 2.305533279871692e-3
allele num: 9976
num of homozygotes: 0

South Asian
type: Population
allele count: 73
allele frequency: 4.97546346782988e-3
allele num: 14672
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 312
allele frequency: 5.852121394005327e-3
allele num: 53314
num of homozygotes: 2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

DP
type: SiteQuality
SIO_000300: 1.291964e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeQuality
all individuals: 238
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9563
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variant carriers: 0

GenotypeQuality
all individuals: 1962
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variant carriers: 0

GenotypeQuality
all individuals: 31471
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.112347052280312e-4
allele num: 8990
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.932459276916965e-5
allele num: 10068
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

DP
type: SiteQuality
SIO_000300: 1.296016e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.05e-1

QD
type: SiteQuality
SIO_000300: 1.234e1

MQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

GenotypeQuality
all individuals: 6371
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33916
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3400
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 559
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variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.418803418803419e-5
allele num: 58500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6154
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

FS
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.45e-1

DP
type: SiteQuality
SIO_000300: 1.361691e6

QD
type: SiteQuality
SIO_000300: 1.223e1

GenotypeQuality
all individuals: 248
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2001
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3435
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5561
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.1441647597254e-3
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11042
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.437e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.433583e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

VQSLOD
type: SiteQuality
SIO_000300: 2.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

GenotypeQuality
all individuals: 681
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 2040
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3441
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 953
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15976
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.132930229643786e-5
allele num: 63838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-1

DP
type: SiteQuality
SIO_000300: 1.446115e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

FS
type: SiteQuality
SIO_000300: 8.856e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.905e-1

QD
type: SiteQuality
SIO_000300: 1.654e1

GenotypeQuality
all individuals: 192
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5887
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variant carriers: 0

GenotypeQuality
all individuals: 3453
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1124
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.941663381947182e-4
allele num: 10148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52699731248473e-5
allele num: 65488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 1.476734e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.349e1

GenotypeQuality
all individuals: 2514
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41720
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 8.25e1
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GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.124448799608035e-5
allele num: 16328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.757160428747145e-4
allele num: 11382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

DP
type: SiteQuality
SIO_000300: 1.481925e6

QD
type: SiteQuality
SIO_000300: 1.231e1

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
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variant carriers: 0

GenotypeQuality
all individuals: 692
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variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66020
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.833068556764023e-4
allele num: 16366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.950458357714063e-4
allele num: 10254
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.487888e6

VQSLOD
type: SiteQuality
SIO_000300: -9.689e-1

FS
type: SiteQuality
SIO_000300: 1.0578e1

QD
type: SiteQuality
SIO_000300: 1.062e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.61e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.57e-1

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41984
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5977
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.027184113337773e-5
allele num: 66068
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.161e1

MQ
type: SiteQuality
SIO_000300: 5.934e1

FS
type: SiteQuality
SIO_000300: 8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.72e-1

DP
type: SiteQuality
SIO_000300: 1.488437e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5991
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2157
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66118
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.101281269066504e-5
allele num: 16390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.96e-1

QD
type: SiteQuality
SIO_000300: 4.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.932e0

FS
type: SiteQuality
SIO_000300: 1.862e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.347e0

VQSLOD
type: SiteQuality
SIO_000300: -3.103e0

DP
type: SiteQuality
SIO_000300: 1.489042e6

GenotypeQuality
all individuals: 3454
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42138
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510984859931704e-5
allele num: 66182
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.830000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.490631e6

VQSLOD
type: SiteQuality
SIO_000300: -6.809999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

FS
type: SiteQuality
SIO_000300: 1.301e0

QD
type: SiteQuality
SIO_000300: 1.081e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-1

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6026
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.087909411907951e-5
allele num: 16426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.68e-1

DP
type: SiteQuality
SIO_000300: 1.492537e6

MQRankSum
type: SiteQuality
SIO_000300: 7.99e-1

FS
type: SiteQuality
SIO_000300: 1.234e0

QD
type: SiteQuality
SIO_000300: 8.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.8e-2

MQ
type: SiteQuality
SIO_000300: 5.92e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.42e-1

GenotypeQuality
all individuals: 3454
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6029
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508614187007815e-5
allele num: 66286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.9e0

DP
type: SiteQuality
SIO_000300: 1.492551e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.844e0

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3462
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 2163
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41813
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.528117359413203e-4
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.782821365681862e-5
allele num: 10222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.056412423410099e-4
allele num: 66262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

QD
type: SiteQuality
SIO_000300: 7.81e0

FS
type: SiteQuality
SIO_000300: 5.580000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.923e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

DP
type: SiteQuality
SIO_000300: 1.490939e6

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
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variant carriers: 0

GenotypeQuality
all individuals: 2565
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.798157946306095e-5
allele num: 10206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.739730816290858e-5
allele num: 11442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.069682151589242e-3
allele num: 6544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 77
allele frequency: 1.162404516771837e-3
allele num: 66242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.52e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

DP
type: SiteQuality
SIO_000300: 1.491078e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.832841691248771e-5
allele num: 10170
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

QD
type: SiteQuality
SIO_000300: 1.132e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

FS
type: SiteQuality
SIO_000300: 3.966e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.486432e6

GenotypeQuality
all individuals: 75
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.216397031991242e-4
allele num: 16442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 2.068e1

DP
type: SiteQuality
SIO_000300: 1.480405e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.13e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.006e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 1754
bin: 8.25e1
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GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511350240304688e-5
allele num: 66166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

FS
type: SiteQuality
SIO_000300: 8.920999999999999e0

DP
type: SiteQuality
SIO_000300: 1.475194e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.05e-1

QD
type: SiteQuality
SIO_000300: 1.576e1

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5914
bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 679
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.023614428688054e-5
allele num: 66146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.772e0

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

QD
type: SiteQuality
SIO_000300: 2.27e0

VQSLOD
type: SiteQuality
SIO_000300: -2.616e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.434e0

DP
type: SiteQuality
SIO_000300: 1.473015e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

GenotypeQuality
all individuals: 297
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variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.25e1
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GenotypeQuality
all individuals: 3473
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 398
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.472264e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.718e0

MQRankSum
type: SiteQuality
SIO_000300: 8.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

FS
type: SiteQuality
SIO_000300: 5.128e0

VQSLOD
type: SiteQuality
SIO_000300: 5.17e-1

QD
type: SiteQuality
SIO_000300: 1.016e1

GenotypeQuality
all individuals: 766
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5898
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511852926947267e-5
allele num: 66144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

QD
type: SiteQuality
SIO_000300: 1.163e1

MQRankSum
type: SiteQuality
SIO_000300: -1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.392e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.79e-1

DP
type: SiteQuality
SIO_000300: 1.471387e6

GenotypeQuality
all individuals: 873
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3653
bin: 9.75e1
variant carriers: 185

GenotypeQuality
all individuals: 36954
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.085686465433301e-5
allele num: 16432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.209921355111918e-4
allele num: 66120
num of homozygotes: 0

African
type: Population
allele count: 165
allele frequency: 1.637229609049414e-2
allele num: 10078
num of homozygotes: 2

Latino
type: Population
allele count: 14
allele frequency: 1.226563868932889e-3
allele num: 11414
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.382e1

DP
type: SiteQuality
SIO_000300: 1.468173e6

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.89e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

FS
type: SiteQuality
SIO_000300: 1.485e0

GenotypeQuality
all individuals: 3562
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 5831
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35300
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 1.927457508323112e-3
allele num: 11414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.035e1

FS
type: SiteQuality
SIO_000300: 9.05e-1

QD
type: SiteQuality
SIO_000300: 1.595e1

DP
type: SiteQuality
SIO_000300: 1.462411e6

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

GenotypeQuality
all individuals: 697
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35300
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3562
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1412
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.989653800238758e-4
allele num: 10052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

MQ
type: SiteQuality
SIO_000300: 6.035e1

DP
type: SiteQuality
SIO_000300: 1.462411e6

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

QD
type: SiteQuality
SIO_000300: 1.595e1

FS
type: SiteQuality
SIO_000300: 9.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

GenotypeQuality
all individuals: 32326
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1478
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515427047341941e-5
allele num: 65988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.695e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.34e-1

FS
type: SiteQuality
SIO_000300: 3.14e0

DP
type: SiteQuality
SIO_000300: 1.462957e6

MQ
type: SiteQuality
SIO_000300: 5.79e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.003e1

GenotypeQuality
all individuals: 1513
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4782
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.39066957543212e-5
allele num: 47672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.328e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.55e-1

FS
type: SiteQuality
SIO_000300: 6.028e0

MQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 1.219338e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

GenotypeQuality
all individuals: 1340
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16452
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.087334056942473e-5
allele num: 47908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.814e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.356e0

MQRankSum
type: SiteQuality
SIO_000300: -4.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

QD
type: SiteQuality
SIO_000300: 7.41e0

DP
type: SiteQuality
SIO_000300: 1.226398e6

GenotypeQuality
all individuals: 1246
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 903
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 879
bin: 8.25e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5190
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 8.67918573457472e-4
allele num: 12674
num of homozygotes: 0

Latino
type: Population
allele count: 40
allele frequency: 4.792715073088905e-3
allele num: 8346
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 3.105590062111801e-3
allele num: 644
num of homozygotes: 0

African
type: Population
allele count: 207
allele frequency: 2.632248219735504e-2
allele num: 7864
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 45
allele frequency: 9.308675685739109e-4
allele num: 48342
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.077e1

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

DP
type: SiteQuality
SIO_000300: 1.255617e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.102e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

GenotypeQuality
all individuals: 557
bin: 7.75e1
variant carriers: 316

GenotypeQuality
all individuals: 430
bin: 8.75e1
variant carriers: 292

GenotypeQuality
all individuals: 4646
bin: 9.75e1
variant carriers: 2236

GenotypeQuality
all individuals: 1527
bin: 4.25e1
variant carriers: 944

GenotypeQuality
all individuals: 5269
bin: 2.25e1
variant carriers: 728

Other
type: Population
allele count: 74
allele frequency: 1.85929648241206e-1
allele num: 398
num of homozygotes: 0

Latino
type: Population
allele count: 1010
allele frequency: 2.749047359825803e-1
allele num: 3674
num of homozygotes: 0

African
type: Population
allele count: 600
allele frequency: 1.258389261744967e-1
allele num: 4768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 241
allele frequency: 8.757267441860465e-2
allele num: 2752
num of homozygotes: 0

South Asian
type: Population
allele count: 3136
allele frequency: 3.760191846522782e-1
allele num: 8340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4945
allele frequency: 2.037159100271896e-1
allele num: 24274
num of homozygotes: 0

East Asian
type: Population
allele count: 659
allele frequency: 2.196666666666667e-1
allele num: 3000
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.141e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e-2

DP
type: SiteQuality
SIO_000300: 1.546629e6

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

GenotypeQuality
all individuals: 4646
bin: 9.75e1
variant carriers: 776

GenotypeQuality
all individuals: 430
bin: 8.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1096
bin: 5.25e1
variant carriers: 9

GenotypeQuality
all individuals: 2012
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 686
bin: 7.25e1
variant carriers: 17

South Asian
type: Population
allele count: 157
allele frequency: 1.882494004796163e-2
allele num: 8340
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 5.025125628140704e-3
allele num: 398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 1.730246354123754e-3
allele num: 24274
num of homozygotes: 0

African
type: Population
allele count: 593
allele frequency: 1.243708053691275e-1
allele num: 4768
num of homozygotes: 7

Latino
type: Population
allele count: 42
allele frequency: 1.143168209036472e-2
allele num: 3674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2752
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 2.333333333333334e-3
allele num: 3000
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.546629e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.141e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.59e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

GenotypeQuality
all individuals: 1096
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2656
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2012
bin: 6.25e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3000
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.398081534772182e-4
allele num: 8340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2752
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.721829069134459e-4
allele num: 3674
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 1.258389261744966e-3
allele num: 4768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24274
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.141e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.546629e6

QD
type: SiteQuality
SIO_000300: 2.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e-2

GenotypeQuality
all individuals: 4646
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1527
bin: 4.25e1
variant carriers: 11

GenotypeQuality
all individuals: 2012
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 686
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 1.0e-3
allele num: 3000
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 1.258389261744966e-3
allele num: 4768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 7.267441860465116e-4
allele num: 2752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 50
allele frequency: 2.059817088242564e-3
allele num: 24274
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 2.994011976047904e-3
allele num: 3674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

South Asian
type: Population
allele count: 21
allele frequency: 2.517985611510791e-3
allele num: 8340
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.141e-1

DP
type: SiteQuality
SIO_000300: 1.546629e6

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.59e0

GenotypeQuality
all individuals: 2012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 5.443658138268917e-4
allele num: 3674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3000
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2752
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.199040767386091e-4
allele num: 8340
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 8.389261744966443e-4
allele num: 4768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.239268352970256e-5
allele num: 24274
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.141e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

QD
type: SiteQuality
SIO_000300: 2.59e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e-2

DP
type: SiteQuality
SIO_000300: 1.546629e6

GenotypeQuality
all individuals: 5269
bin: 2.25e1
variant carriers: 87

GenotypeQuality
all individuals: 1175
bin: 4.75e1
variant carriers: 75

GenotypeQuality
all individuals: 1096
bin: 5.25e1
variant carriers: 53

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 19

GenotypeQuality
all individuals: 4646
bin: 9.75e1
variant carriers: 1058

East Asian
type: Population
allele count: 99
allele frequency: 3.3e-2
allele num: 3000
num of homozygotes: 0

African
type: Population
allele count: 83
allele frequency: 1.740771812080537e-2
allele num: 4768
num of homozygotes: 0

Latino
type: Population
allele count: 98
allele frequency: 2.667392487751769e-2
allele num: 3674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 93
allele frequency: 3.379360465116279e-2
allele num: 2752
num of homozygotes: 1

Other
type: Population
allele count: 17
allele frequency: 4.271356783919598e-2
allele num: 398
num of homozygotes: 0

South Asian
type: Population
allele count: 171
allele frequency: 2.050359712230216e-2
allele num: 8340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1270
allele frequency: 5.231935404136113e-2
allele num: 24274
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

QD
type: SiteQuality
SIO_000300: 2.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.141e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.546629e6

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 185
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 406
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 451
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2334
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 4.560530679933665e-3
allele num: 2412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1690
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.336448598130841e-3
allele num: 1284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.593879502709595e-4
allele num: 12548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 236
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.180000000000001e-2

FS
type: SiteQuality
SIO_000300: 3.422e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

DP
type: SiteQuality
SIO_000300: 1.342334e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 5.4e-1

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1615
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 185
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4927
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.969397513547975e-5
allele num: 12548
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.261034047919294e-3
allele num: 1586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1284
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.243781094527363e-3
allele num: 2412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1690
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

DP
type: SiteQuality
SIO_000300: 1.342334e6

QD
type: SiteQuality
SIO_000300: 5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e-1

FS
type: SiteQuality
SIO_000300: 3.422e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.180000000000001e-2

GenotypeQuality
all individuals: 758
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3964
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.247898215168817e-5
allele num: 44486
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.624431448992852e-4
allele num: 6156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.741e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.62e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

QD
type: SiteQuality
SIO_000300: 8.93e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.02e-1

DP
type: SiteQuality
SIO_000300: 1.475638e6

FS
type: SiteQuality
SIO_000300: 5.338e0

GenotypeQuality
all individuals: 3381
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2904
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7818
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.687934643170616e-5
allele num: 59244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.603e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 7.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e0

QD
type: SiteQuality
SIO_000300: 2.248e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 1.592397e6

MQRankSum
type: SiteQuality
SIO_000300: -7.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.41e0

GenotypeQuality
all individuals: 21984
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10408
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.282380097460887e-4
allele num: 7798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14426
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

FS
type: SiteQuality
SIO_000300: 1.803e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e0

MQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

QD
type: SiteQuality
SIO_000300: 3.64e0

DP
type: SiteQuality
SIO_000300: 1.615707e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.781e0

GenotypeQuality
all individuals: 2545
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
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variant carriers: 0

GenotypeQuality
all individuals: 21709
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.69785052124011e-5
allele num: 58898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.24e0

VQSLOD
type: SiteQuality
SIO_000300: -7.387e-1

MQ
type: SiteQuality
SIO_000300: 5.872e1

DP
type: SiteQuality
SIO_000300: 1.624469e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.967e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.54e-1

FS
type: SiteQuality
SIO_000300: 1.6363e1

GenotypeQuality
all individuals: 4099
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4680
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3760
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 9.25e1
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GenotypeQuality
all individuals: 2150
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.69785052124011e-5
allele num: 58898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14332
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.6363e1

QD
type: SiteQuality
SIO_000300: 9.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.387e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.967e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.624469e6

MQ
type: SiteQuality
SIO_000300: 5.872e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-1

GenotypeQuality
all individuals: 508
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1721
bin: 4.25e1
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GenotypeQuality
all individuals: 5006
bin: 9.75e1
variant carriers: 427

GenotypeQuality
all individuals: 3971
bin: 6.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 1.819226350057449e-3
allele num: 10444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.173590852697582e-4
allele num: 59646
num of homozygotes: 0

African
type: Population
allele count: 428
allele frequency: 4.641075688570809e-2
allele num: 9222
num of homozygotes: 10

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.630244e6

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.91e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

QD
type: SiteQuality
SIO_000300: 1.408e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 22730
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3971
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3903
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3898
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.676558360996546e-5
allele num: 59646
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.91e-2

QD
type: SiteQuality
SIO_000300: 1.408e1

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.630244e6