1-161094097-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094097
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094097
    reference: chr 1
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.156C>T
  hgvsp: ENST00000545495.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.156C>T
  hgvsp: ENST00000464113.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-97C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.147-97C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.370-97C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.156C>T
  hgvsp: ENST00000368006.3:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.156C>T
  hgvsp: ENST00000490843.2:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.156C>T
  hgvsp: ENST00000458050.2:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.280+33C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.156C>T
  hgvsp: ENST00000368005.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*152G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.339C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.156C>T
  hgvsp: ENST00000392188.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.199G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3164C>T
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val52Val
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

1-161094102-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094102
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094102
    reference: chr 1
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.280+28G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*157C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3169G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.334G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+102G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.151G>A
  hgvsp: ENSP00000445835.1:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.151G>A
  hgvsp: ENSP00000414821.2:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.151G>A
  hgvsp: ENSP00000356984.1:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.151G>A
  hgvsp: ENSP00000376027.1:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-102G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.151G>A
  hgvsp: ENSP00000476946.1:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.151G>A
  hgvsp: ENSP00000476316.1:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+102G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.204C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.151G>A
  hgvsp: ENSP00000356985.3:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp51Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-161094104-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094104
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094104
    reference: chr 1
allele count: 1
allele frequency: 8.287475966319697e-6
allele num: 120664
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3171T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.280+26T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.149T>C
  hgvsp: ENSP00000376027.1:p.Val50Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.206A>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+100T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.149T>C
  hgvsp: ENSP00000476316.1:p.Val50Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.149T>C
  hgvsp: ENSP00000445835.1:p.Val50Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.149T>C
  hgvsp: ENSP00000356984.1:p.Val50Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.149T>C
  hgvsp: ENSP00000414821.2:p.Val50Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.149T>C
  hgvsp: ENSP00000356985.3:p.Val50Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.149T>C
  hgvsp: ENSP00000476946.1:p.Val50Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+100T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*159A>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.332T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-104T>C
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val50Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-161094108-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094108
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094108
    reference: chr 1
allele count: 1
allele frequency: 8.29132395860971e-6
allele num: 120608
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.145T>C
  hgvsp: ENSP00000376027.1:p.Phe49Leu
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-108T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.145T>C
  hgvsp: ENSP00000356984.1:p.Phe49Leu
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.145T>C
  hgvsp: ENSP00000414821.2:p.Phe49Leu
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+96T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.145T>C
  hgvsp: ENSP00000476946.1:p.Phe49Leu
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+96T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.145T>C
  hgvsp: ENSP00000356985.3:p.Phe49Leu
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.328T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3175T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.145T>C
  hgvsp: ENSP00000445835.1:p.Phe49Leu
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.210A>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.145T>C
  hgvsp: ENSP00000476316.1:p.Phe49Leu
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.280+22T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*163A>G
  variant of: http://identifiers.org/hgnc/7828
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Phe49Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

1-161094124-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094124
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094124
    reference: chr 1
allele count: 1
allele frequency: 8.305371914554334e-6
allele num: 120404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.129C>T
  hgvsp: ENST00000392188.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.312C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.129C>T
  hgvsp: ENST00000368006.3:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.129C>T
  hgvsp: ENST00000458050.2:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.129C>T
  hgvsp: ENST00000464113.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.280+6C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.129C>T
  hgvsp: ENST00000368005.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*179G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.129C>T
  hgvsp: ENST00000490843.2:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.129C>T
  hgvsp: ENST00000545495.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.226G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-124C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+80C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+80C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3191C>T
  variant of: http://identifiers.org/hgnc/2755
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.280+6C>T
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-161094124-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094124
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094124
    reference: chr 1
allele count: 2
allele frequency: 1.661074382910867e-5
allele num: 120404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.129C>G
  hgvsp: ENST00000490843.2:c.129C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.280+6C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.312C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.129C>G
  hgvsp: ENST00000458050.2:c.129C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.129C>G
  hgvsp: ENST00000464113.1:c.129C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+80C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.129C>G
  hgvsp: ENST00000545495.1:c.129C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.226G>C
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*179G>C
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.129C>G
  hgvsp: ENST00000392188.1:c.129C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3191C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+80C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-124C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.129C>G
  hgvsp: ENST00000368005.1:c.129C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.129C>G
  hgvsp: ENST00000368006.3:c.129C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.280+6C>G
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP

1-161094125-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094125
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094125
    reference: chr 1
allele count: 1
allele frequency: 8.305233958440609e-6
allele num: 120406
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.128G>A
  hgvsp: ENSP00000356985.3:p.Arg43His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.128G>A
  hgvsp: ENSP00000476946.1:p.Arg43His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.128G>A
  hgvsp: ENSP00000356984.1:p.Arg43His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.280+5G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.128G>A
  hgvsp: ENSP00000414821.2:p.Arg43His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+79G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-125G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.128G>A
  hgvsp: ENSP00000376027.1:p.Arg43His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.128G>A
  hgvsp: ENSP00000445835.1:p.Arg43His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.311G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.128G>A
  hgvsp: ENSP00000476316.1:p.Arg43His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.227C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+79G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*180C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3192G>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg43His
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

1-161094150-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094150
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094150
    reference: chr 1
allele count: 1
allele frequency: 8.32126749546491e-6
allele num: 120174
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.103A>G
  hgvsp: ENSP00000476316.1:p.Thr35Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.103A>G
  hgvsp: ENSP00000376027.1:p.Thr35Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.260A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.103A>G
  hgvsp: ENSP00000445835.1:p.Thr35Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.103A>G
  hgvsp: ENSP00000356985.3:p.Thr35Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*205T>C
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.103A>G
  hgvsp: ENSP00000476946.1:p.Thr35Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+54A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3217A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.252T>C
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.103A>G
  hgvsp: ENSP00000414821.2:p.Thr35Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-150A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.103A>G
  hgvsp: ENSP00000356984.1:p.Thr35Ala
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.286A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+54A>G
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13134
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr35Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS

1-161094157-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094157
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094157
    reference: chr 1
allele count: 1
allele frequency: 8.32514693884347e-6
allele num: 120118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.96C>T
  hgvsp: ENST00000458050.2:c.96C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.96C>T
  hgvsp: ENST00000368006.3:c.96C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*212G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-157C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3224C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+47C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.96C>T
  hgvsp: ENST00000545495.1:c.96C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.259G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.96C>T
  hgvsp: ENST00000392188.1:c.96C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.279C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.96C>T
  hgvsp: ENST00000464113.1:c.96C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.96C>T
  hgvsp: ENST00000368005.1:c.96C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.96C>T
  hgvsp: ENST00000490843.2:c.96C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+47C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.253C>T
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile32Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS

1-161094169-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094169
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094169
    reference: chr 1
allele count: 1
allele frequency: 8.331805835596807e-6
allele num: 120022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*224G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.84C>T
  hgvsp: ENST00000464113.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.84C>T
  hgvsp: ENST00000490843.2:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.267C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3236C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.84C>T
  hgvsp: ENST00000368005.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+35C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-169C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.271G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.84C>T
  hgvsp: ENST00000392188.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.84C>T
  hgvsp: ENST00000458050.2:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.84C>T
  hgvsp: ENST00000545495.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.84C>T
  hgvsp: ENST00000368006.3:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.241C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+35C>T
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg28Arg
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-161094170-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094170
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094170
    reference: chr 1
allele count: 26
allele frequency: 2.166341715409355e-4
allele num: 120018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.266G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*225C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.83G>A
  hgvsp: ENSP00000414821.2:p.Arg28His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.83G>A
  hgvsp: ENSP00000476316.1:p.Arg28His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-170G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.83G>A
  hgvsp: ENSP00000445835.1:p.Arg28His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.272C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+34G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.83G>A
  hgvsp: ENSP00000376027.1:p.Arg28His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.83G>A
  hgvsp: ENSP00000476946.1:p.Arg28His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.83G>A
  hgvsp: ENSP00000356984.1:p.Arg28His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.240G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.83G>A
  hgvsp: ENSP00000356985.3:p.Arg28His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+34G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3237G>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg28His
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

1-161094171-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094171
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094171
    reference: chr 1
allele count: 4
allele frequency: 3.33350000833375e-5
allele num: 119994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-171C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.82C>T
  hgvsp: ENSP00000376027.1:p.Arg28Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+33C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.82C>T
  hgvsp: ENSP00000356984.1:p.Arg28Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.273G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+33C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.82C>T
  hgvsp: ENSP00000356985.3:p.Arg28Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.82C>T
  hgvsp: ENSP00000476316.1:p.Arg28Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3238C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.239C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.265C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.82C>T
  hgvsp: ENSP00000445835.1:p.Arg28Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.82C>T
  hgvsp: ENSP00000476946.1:p.Arg28Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.82C>T
  hgvsp: ENSP00000414821.2:p.Arg28Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*226G>A
  variant of: http://identifiers.org/hgnc/7828
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19776
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg28Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

1-161094172-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094172
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094172
    reference: chr 1
allele count: 1
allele frequency: 8.334861391255063e-6
allele num: 119978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.81C>T
  hgvsp: ENST00000464113.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+32C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.81C>T
  hgvsp: ENST00000368005.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+32C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.81C>T
  hgvsp: ENST00000458050.2:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3239C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-172C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*227G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.81C>T
  hgvsp: ENST00000490843.2:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.81C>T
  hgvsp: ENST00000545495.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.81C>T
  hgvsp: ENST00000368006.3:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.238C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.274G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.81C>T
  hgvsp: ENST00000392188.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.264C>T
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His27His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD

1-161094177-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094177
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094177
    reference: chr 1
allele count: 1
allele frequency: 8.337641114575865e-6
allele num: 119938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+27C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-177C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3244C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.76C>T
  hgvsp: ENST00000464113.1:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.76C>T
  hgvsp: ENST00000368006.3:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.76C>T
  hgvsp: ENST00000392188.1:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.76C>T
  hgvsp: ENST00000368005.1:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.76C>T
  hgvsp: ENST00000458050.2:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.233C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.76C>T
  hgvsp: ENST00000545495.1:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.76C>T
  hgvsp: ENST00000490843.2:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.279G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*232G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+27C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.259C>T
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu26Leu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

1-161094177-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094177
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094177
    reference: chr 1
allele count: 1
allele frequency: 8.337641114575865e-6
allele num: 119938
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.76C>G
  hgvsp: ENSP00000445835.1:p.Leu26Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.76C>G
  hgvsp: ENSP00000476946.1:p.Leu26Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*232G>C
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-177C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3244C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.76C>G
  hgvsp: ENSP00000356984.1:p.Leu26Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.76C>G
  hgvsp: ENSP00000476316.1:p.Leu26Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+27C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.76C>G
  hgvsp: ENSP00000414821.2:p.Leu26Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.259C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+27C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.233C>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.279G>C
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.76C>G
  hgvsp: ENSP00000376027.1:p.Leu26Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.76C>G
  hgvsp: ENSP00000356985.3:p.Leu26Val
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19773
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu26Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

1-161094184-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094184
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094184
    reference: chr 1
allele count: 1
allele frequency: 8.34153584357952e-6
allele num: 119882
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.69G>A
  hgvsp: ENST00000545495.1:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.69G>A
  hgvsp: ENST00000368005.1:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.252G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.69G>A
  hgvsp: ENST00000464113.1:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.286C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.226G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.69G>A
  hgvsp: ENST00000490843.2:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3251G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*239C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.69G>A
  hgvsp: ENST00000458050.2:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.69G>A
  hgvsp: ENST00000368006.3:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.69G>A
  hgvsp: ENST00000392188.1:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-184G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+20G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+20G>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu23Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

1-161094190-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094190
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094190
    reference: chr 1
allele count: 10577
allele frequency: 8.828144562223521e-2
allele num: 119810
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.63T>C
  hgvsp: ENST00000458050.2:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.220T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.63T>C
  hgvsp: ENST00000368005.1:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.63T>C
  hgvsp: ENST00000368006.3:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3257T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.63T>C
  hgvsp: ENST00000545495.1:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.63T>C
  hgvsp: ENST00000490843.2:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-190T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.63T>C
  hgvsp: ENST00000392188.1:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+14T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*245A>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.292A>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+14T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.63T>C
  hgvsp: ENST00000464113.1:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.246T>C
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.25e1
  variant carriers: 585
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.5e0
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 4.25e1
  variant carriers: 323
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 710
genotype depth: GenotypeDepth
  all individuals: 10332
  bin: 3.25e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.75e1
  variant carriers: 665
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.75e1
  variant carriers: 551
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 8.25e1
  variant carriers: 625
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 3.75e1
  variant carriers: 279
genotype quality: GenotypeQuality
hgvs: p.His21His
num of homozygotes: 508
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

1-161094191-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094191
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094191
    reference: chr 1
allele count: 1
allele frequency: 8.351707088928977e-6
allele num: 119736
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.62A>G
  hgvsp: ENSP00000356985.3:p.His21Arg
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.62A>G
  hgvsp: ENSP00000476316.1:p.His21Arg
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.62A>G
  hgvsp: ENSP00000376027.1:p.His21Arg
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*246T>C
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.62A>G
  hgvsp: ENSP00000356984.1:p.His21Arg
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.219A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.245A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.62A>G
  hgvsp: ENSP00000476946.1:p.His21Arg
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3258A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.293T>C
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.62A>G
  hgvsp: ENSP00000445835.1:p.His21Arg
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.62A>G
  hgvsp: ENSP00000414821.2:p.His21Arg
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+13A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-191A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+13A>G
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6232
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His21Arg
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-161094192-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094192
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094192
    reference: chr 1
allele count: 1
allele frequency: 8.352962795903706e-6
allele num: 119718
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.61C>T
  hgvsp: ENSP00000476946.1:p.His21Tyr
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.61C>T
  hgvsp: ENSP00000445835.1:p.His21Tyr
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.218C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.61C>T
  hgvsp: ENSP00000376027.1:p.His21Tyr
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-192C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*247G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+12C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+12C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.61C>T
  hgvsp: ENSP00000476316.1:p.His21Tyr
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3259C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.61C>T
  hgvsp: ENSP00000356984.1:p.His21Tyr
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.244C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.294G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.61C>T
  hgvsp: ENSP00000356985.3:p.His21Tyr
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.61C>T
  hgvsp: ENSP00000414821.2:p.His21Tyr
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His21Tyr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-161094195-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094195
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094195
    reference: chr 1
allele count: 1
allele frequency: 8.357011532675915e-6
allele num: 119660
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.58G>C
  hgvsp: ENSP00000445835.1:p.Glu20Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+9G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.58G>C
  hgvsp: ENSP00000376027.1:p.Glu20Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.58G>C
  hgvsp: ENSP00000414821.2:p.Glu20Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.297C>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.58G>C
  hgvsp: ENSP00000356985.3:p.Glu20Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.58G>C
  hgvsp: ENSP00000476946.1:p.Glu20Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.215G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.58G>C
  hgvsp: ENSP00000356984.1:p.Glu20Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.58G>C
  hgvsp: ENSP00000476316.1:p.Glu20Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3262G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-195G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.241G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+9G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*250C>G
  variant of: http://identifiers.org/hgnc/7828
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu20Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-161094199-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094199
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094199
    reference: chr 1
allele count: 35
allele frequency: 2.929801945388492e-4
allele num: 119462
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.54G>C
  hgvsp: ENSP00000376027.1:p.Glu18Asp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*254C>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.237G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.54G>C
  hgvsp: ENSP00000356985.3:p.Glu18Asp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.54G>C
  hgvsp: ENSP00000476316.1:p.Glu18Asp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.54G>C
  hgvsp: ENSP00000476946.1:p.Glu18Asp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.54G>C
  hgvsp: ENSP00000445835.1:p.Glu18Asp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3266G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.54G>C
  hgvsp: ENSP00000414821.2:p.Glu18Asp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.54G>C
  hgvsp: ENSP00000356984.1:p.Glu18Asp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-199G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.146+5G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.369+5G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.301C>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.211G>C
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12829
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Glu18Asp
num of homozygotes: 1
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

1-161094220-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094220
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094220
    reference: chr 1
allele count: 2
allele frequency: 1.69284940411701e-5
allele num: 118144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.33G>A
  hgvsp: ENST00000368005.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.322C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.33G>A
  hgvsp: ENST00000458050.2:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.33G>A
  hgvsp: ENST00000490843.2:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.216G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.190G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.33G>A
  hgvsp: ENST00000545495.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.33G>A
  hgvsp: ENST00000464113.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-220G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.130G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.33G>A
  hgvsp: ENST00000368006.3:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*275C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.33G>A
  hgvsp: ENST00000392188.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3287G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.353G>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val11Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

1-161094223-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094223
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094223
    reference: chr 1
allele count: 1
allele frequency: 8.494156020657787e-6
allele num: 117728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.30G>C
  hgvsp: ENSP00000376027.1:p.Gln10His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.30G>C
  hgvsp: ENSP00000414821.2:p.Gln10His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.350G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.30G>C
  hgvsp: ENSP00000356985.3:p.Gln10His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.30G>C
  hgvsp: ENSP00000356984.1:p.Gln10His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3290G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-223G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.213G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.30G>C
  hgvsp: ENSP00000445835.1:p.Gln10His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.325C>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.30G>C
  hgvsp: ENSP00000476316.1:p.Gln10His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.127G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.30G>C
  hgvsp: ENSP00000476946.1:p.Gln10His
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.187G>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*278C>G
  variant of: http://identifiers.org/hgnc/7828
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln10His
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

1-161094234-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094234
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094234
    reference: chr 1
allele count: 2
allele frequency: 1.714883473667964e-5
allele num: 116626
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-234C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.19C>T
  hgvsp: ENSP00000445835.1:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.19C>T
  hgvsp: ENSP00000376027.1:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.176C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.19C>T
  hgvsp: ENSP00000356984.1:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.202C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.336G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.19C>T
  hgvsp: ENSP00000414821.2:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.19C>T
  hgvsp: ENSP00000476946.1:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.19C>T
  hgvsp: ENSP00000356985.3:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.339C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.19C>T
  hgvsp: ENSP00000476316.1:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3301C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.116C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*289G>A
  variant of: http://identifiers.org/hgnc/7828
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6068
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg7Trp
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

1-161094236-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094236
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094236
    reference: chr 1
allele count: 1
allele frequency: 8.574564412127864e-6
allele num: 116624
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.17G>A
  hgvsp: ENSP00000445835.1:p.Arg6Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3303G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.200G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.114G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.17G>A
  hgvsp: ENSP00000376027.1:p.Arg6Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.17G>A
  hgvsp: ENSP00000476316.1:p.Arg6Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-236G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.17G>A
  hgvsp: ENSP00000356985.3:p.Arg6Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.17G>A
  hgvsp: ENSP00000476946.1:p.Arg6Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.17G>A
  hgvsp: ENSP00000356984.1:p.Arg6Gln
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.174G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*291C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.338C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.337G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.17G>A
  hgvsp: ENSP00000414821.2:p.Arg6Gln
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg6Gln
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

1-161094243-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094243
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094243
    reference: chr 1
allele count: 2
allele frequency: 1.724375775969099e-5
allele num: 115984
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.10C>A
  hgvsp: ENSP00000356985.3:p.Leu4Ile
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.10C>A
  hgvsp: ENSP00000414821.2:p.Leu4Ile
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.10C>A
  hgvsp: ENSP00000376027.1:p.Leu4Ile
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.107C>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.167C>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.10C>A
  hgvsp: ENSP00000445835.1:p.Leu4Ile
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.10C>A
  hgvsp: ENSP00000476946.1:p.Leu4Ile
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.10C>A
  hgvsp: ENSP00000476316.1:p.Leu4Ile
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.345G>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*298G>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.10C>A
  hgvsp: ENSP00000356984.1:p.Leu4Ile
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.330C>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3310C>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-243C>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.193C>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu4Ile
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/1-161094246-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094246
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094246
    reference: chr 1
allele count: 1
allele frequency: 8.639159582555808e-6
allele num: 115752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.190G>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.104G>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.327G>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.7G>T
  hgvsp: ENSP00000414821.2:p.Gly3Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.7G>T
  hgvsp: ENSP00000376027.1:p.Gly3Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.7G>T
  hgvsp: ENSP00000445835.1:p.Gly3Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.7G>T
  hgvsp: ENSP00000356984.1:p.Gly3Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.7G>T
  hgvsp: ENSP00000476316.1:p.Gly3Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-246G>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.7G>T
  hgvsp: ENSP00000356985.3:p.Gly3Cys
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3313G>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.348C>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*301C>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.164G>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.7G>T
  hgvsp: ENSP00000476946.1:p.Gly3Cys
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly3Cys
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-161094248-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094248
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094248
    reference: chr 1
allele count: 18
allele frequency: 1.560657557050704e-4
allele num: 115336
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.5C>T
  hgvsp: ENSP00000356985.3:p.Ala2Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.325C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.102C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.5C>T
  hgvsp: ENSP00000414821.2:p.Ala2Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.5C>T
  hgvsp: ENSP00000476946.1:p.Ala2Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.5C>T
  hgvsp: ENSP00000356984.1:p.Ala2Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.5C>T
  hgvsp: ENSP00000376027.1:p.Ala2Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.350G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.5C>T
  hgvsp: ENSP00000445835.1:p.Ala2Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-248C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*303G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3315C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.5C>T
  hgvsp: ENSP00000476316.1:p.Ala2Val
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.162C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.188C>T
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6045
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

1-161094255-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094255
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094254
    reference: chr 1
allele count: 1
allele frequency: 8.723872003349968e-6
allele num: 114628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-4delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-4delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.362delG
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3323delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-4delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-4delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-4delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-4delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-4delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.317delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-256delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.94delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*315delG
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.180delC
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.154delC
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: TG
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

1-161094261-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094261
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094261
    reference: chr 1
allele count: 1
allele frequency: 8.813989564236357e-6
allele num: 113456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.312G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-9G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.363C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*316C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.149G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-9G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-261G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.89G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-9G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.175G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3328G>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12350
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-161094263-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094263
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094263
    reference: chr 1
allele count: 2
allele frequency: 1.76531855173266e-5
allele num: 113294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-11G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.147G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.87G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.173G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-11G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-11G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-11G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.365C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-11G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-11G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-11G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3330G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.310G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*318C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-263G>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3291
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

1-161094265-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094265
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094265
    reference: chr 1
allele count: 2
allele frequency: 1.772672481032404e-5
allele num: 112824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.171C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.367G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.145C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.308C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-265C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-13C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-13C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*320G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-13C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3332C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.85C>T
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

1-161094269-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094269
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094269
    reference: chr 1
allele count: 4
allele frequency: 3.559352197899982e-5
allele num: 112380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-17G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-17G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.167G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*324C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.304G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-269G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3336G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.371C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.141G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.81G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-17G>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8588
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

1-161094270-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094270
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094270
    reference: chr 1
allele count: 7
allele frequency: 6.236413527671858e-5
allele num: 112244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3337C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.372G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-18C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-270C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-18C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.303C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.80C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.140C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-18C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*325G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.166C>T
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP

1-161094273-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094273
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094273
    reference: chr 1
allele count: 1
allele frequency: 8.940705242829554e-6
allele num: 111848
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.300T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-21T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-273T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-21T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.163T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*328A>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.375A>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-21T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.77T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-21T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-21T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-21T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.137T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-21T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3340T>C
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-161094274-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094274
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094274
    reference: chr 1
allele count: 6
allele frequency: 5.370184734354862e-5
allele num: 111728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*329T>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-22A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-22A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.162A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.376T>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-22A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-22A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.76A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-22A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-22A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-22A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.136A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.299A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-274A>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3341A>T
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19032
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

1-161094278-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094278
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094278
    reference: chr 1
allele count: 2
allele frequency: 1.797429675563943e-5
allele num: 111270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-26A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*333T>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-278A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3345A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-26A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.158A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-26A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-26A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-26A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.72A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.380T>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.132A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-26A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-26A>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.295A>C
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18686
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

1-161094284-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094284
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094284
    reference: chr 1
allele count: 1
allele frequency: 9.031791907514451e-6
allele num: 110720
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.152T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-32T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-32T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-32T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-32T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.289T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.126T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-32T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-32T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-32T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.386A>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*339A>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-284T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.66T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3351T>C
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

1-161094287-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094287
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094287
    reference: chr 1
allele count: 13
allele frequency: 1.17890307603018e-4
allele num: 110272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3354G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-35G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.149G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-35G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-287G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.123G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*342C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-35G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.286G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.63G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.389C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16966
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

1-161094288-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094288
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094288
    reference: chr 1
allele count: 1
allele frequency: 9.069307649054072e-6
allele num: 110262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.148G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.122G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-36G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-36G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-36G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*343C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-36G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-36G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-36G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.285G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.62G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.390C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3355G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-288G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-36G>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

1-161094293-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094293
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094293
    reference: chr 1
allele count: 2
allele frequency: 1.821062407808715e-5
allele num: 109826
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.395T>C
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-41A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3360A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.117A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*348T>C
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-293A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-41A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-41A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.57A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.143A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.280A>G
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-161094294-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094294
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094294
    reference: chr 1
allele count: 38
allele frequency: 3.468862395705914e-4
allele num: 109546
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-42G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.142G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3361G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-42G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*349C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-294G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-42G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-42G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-42G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.56G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-42G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.116G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-42G>A
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.396C>T
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.279G>A
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5798
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8305
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

1-161094299-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094299
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094299
    reference: chr 1
allele count: 4
allele frequency: 3.657845163414232e-5
allele num: 109354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*354G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3366C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-47C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.51C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.401G>A
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-47C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-47C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.274C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-47C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.137C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-299C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-47C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-47C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-47C>T
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.111C>T
  variant of: http://identifiers.org/hgnc/2755
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13670
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

1-161094304-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161094304
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161094304
    reference: chr 1
allele count: 2
allele frequency: 1.83492972219164e-5
allele num: 108996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000414821
  ensembl transcript: ENST00000458050
  gene symbol: DEDD
  hgvsc: ENST00000458050.2:c.-52T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356985
  ensembl transcript: ENST00000368006
  gene symbol: DEDD
  hgvsc: ENST00000368006.3:c.-52T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000463227
  gene symbol: DEDD
  hgvsc: ENST00000463227.1:n.132T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476946
  ensembl transcript: ENST00000490843
  gene symbol: DEDD
  hgvsc: ENST00000490843.2:c.-52T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000476316
  ensembl transcript: ENST00000464113
  gene symbol: DEDD
  hgvsc: ENST00000464113.1:c.-52T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000158793
  ensembl protein: ENSP00000356987
  ensembl transcript: ENST00000368008
  gene symbol: NIT1
  hgvsc: ENST00000368008.1:c.*359A>G
  variant of: http://identifiers.org/hgnc/7828
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000376027
  ensembl transcript: ENST00000392188
  gene symbol: DEDD
  hgvsc: ENST00000392188.1:c.-52T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000496632
  gene symbol: DEDD
  hgvsc: ENST00000496632.1:n.269T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000489249
  gene symbol: DEDD
  hgvsc: ENST00000489249.1:n.56-304T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000445835
  ensembl transcript: ENST00000545495
  gene symbol: DEDD
  hgvsc: ENST00000545495.1:c.-52T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000472996
  gene symbol: DEDD
  hgvsc: ENST00000472996.1:n.145-3371T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000473679
  gene symbol: DEDD
  hgvsc: ENST00000473679.2:n.106T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158796
  ensembl transcript: ENST00000486041
  gene symbol: DEDD
  hgvsc: ENST00000486041.1:n.46T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000158796
  ensembl protein: ENSP00000356984
  ensembl transcript: ENST00000368005
  gene symbol: DEDD
  hgvsc: ENST00000368005.1:c.-52T>C
  variant of: http://identifiers.org/hgnc/2755
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158793
  ensembl transcript: ENST00000479728
  gene symbol: NIT1
  hgvsc: ENST00000479728.1:n.406A>G
  variant of: http://identifiers.org/hgnc/7828
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-161123744-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123744
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123744
    reference: chr 1
allele count: 1
allele frequency: 8.269246671628215e-6
allele num: 120930
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.185T>C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-44A>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.349A>G
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6992
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4858
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3865
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4017
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2516
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3767
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4434
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28201
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

1-161123745-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123745
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123745
    reference: chr 1
allele count: 1
allele frequency: 8.271845945141119e-6
allele num: 120892
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.184G>A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-43C>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.350C>T
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8980
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6994
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3772
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4419
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4013
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3862
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28198
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-161123748-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123748
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123748
    reference: chr 1
allele count: 3
allele frequency: 2.480568877129155e-5
allele num: 120940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.353G>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-40G>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.181C>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7004
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8996
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4858
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4057
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3922
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7848
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4467
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 3791
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 584
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28215
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2771
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/1-161123749-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123749
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123749
    reference: chr 1
allele count: 11
allele frequency: 9.099181073703367e-5
allele num: 120890
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-39C>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.180G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.354C>A
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4859
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7876
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10290
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9014
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28225
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 4417
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 211
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genotype quality: GenotypeQuality
  all individuals: 3932
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3796
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genotype quality: GenotypeQuality
  all individuals: 588
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genotype quality: GenotypeQuality
  all individuals: 4036
  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

1-161123749-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123749
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123749
    reference: chr 1
allele count: 1
allele frequency: 8.271982794275789e-6
allele num: 120890
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.180G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.354C>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-39C>G
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10290
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4859
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 28225
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

1-161123752-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123752
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123752
    reference: chr 1
allele count: 75
allele frequency: 6.202550488760978e-4
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.177G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.357C>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-36C>T
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10368
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 9021
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 556
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9796
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 197
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4461
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3967
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8199
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4079
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2787
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28271
  bin: 9.75e1
  variant carriers: 75
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-161123762-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123762
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123762
    reference: chr 1
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.167C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.367G>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-26G>A
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7038
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3857
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4535
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28302
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4069
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2609
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9017
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

1-161123765-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123765
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123765
    reference: chr 1
allele count: 1
allele frequency: 8.256411103221652e-6
allele num: 121118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.370T>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-23T>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.164A>C
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10264
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9096
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9221
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2880
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28327
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4573
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4205
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4097
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2624
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3871
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

1-161123766-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123766
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123766
    reference: chr 1
allele count: 1
allele frequency: 8.256411103221652e-6
allele num: 121118
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.163A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.371T>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-22T>C
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7048
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
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genotype quality: GenotypeQuality
  all individuals: 2880
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4100
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genotype quality: GenotypeQuality
  all individuals: 214
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genotype quality: GenotypeQuality
  all individuals: 2624
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4211
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 67
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/1-161123774-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123774
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123774
    reference: chr 1
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.155G>T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-14C>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.379C>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.1C>A
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9124
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
  all individuals: 387
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10711
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 81
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3886
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4591
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2633
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

1-161123782-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123782
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123782
    reference: chr 1
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.9T>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.147A>C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-6T>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.8T>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.387T>G
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4622
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4152
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9525
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

1-161123786-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123786
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123786
    reference: chr 1
allele count: 5
allele frequency: 4.122623307663132e-5
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.12A>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.13A>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.391A>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.-2A>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.143T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.3A>G
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4887
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2645
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4255
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-161123803-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123803
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123803
    reference: chr 1
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.29A>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.16A>G
  hgvsp: ENSP00000356982.5:p.Thr6Ala
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.30A>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.20A>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.126T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.408A>G
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2652
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4632
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28398
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9545
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr6Ala
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

1-161123804-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123804
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123804
    reference: chr 1
allele count: 52
allele frequency: 4.285549456889021e-4
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.409C>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.31C>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.30C>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.21C>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.17C>T
  hgvsp: ENSP00000356982.5:p.Thr6Met
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.125G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10804
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3287
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7077
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4890
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4627
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3917
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4260
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28428
  bin: 9.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr6Met
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-161123806-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123806
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123806
    reference: chr 1
allele count: 3
allele frequency: 2.47239162683369e-5
allele num: 121340
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.23C>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.19C>G
  hgvsp: ENSP00000356982.5:p.Arg7Gly
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.411C>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.123G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.32C>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.33C>G
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10593
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3919
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg7Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-161123813-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123813
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123813
    reference: chr 1
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.39T>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.418T>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.116A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.30T>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.40T>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.26T>A
  hgvsp: ENSP00000356982.5:p.Val9Asp
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28417
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9578
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2949
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4637
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val9Asp
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-161123816-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123816
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123816
    reference: chr 1
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.113A>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.29T>C
  hgvsp: ENSP00000356982.5:p.Val10Ala
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.42T>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.43T>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.421T>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.33T>C
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2952
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9587
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3921
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28417
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val10Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

1-161123817-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123817
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123817
    reference: chr 1
allele count: 3
allele frequency: 2.471902705909495e-5
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.44G>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.30G>A
  hgvsp: ENST00000368003.5:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.112C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.43G>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.34G>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.422G>A
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4638
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28418
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3921
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4181
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val10Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

1-161123818-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123818
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123818
    reference: chr 1
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.423T>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.31T>G
  hgvsp: ENSP00000356982.5:p.Ser11Ala
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.35T>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.45T>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.44T>G
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.111A>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4179
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3922
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28420
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4640
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser11Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

1-161123825-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123825
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123825
    reference: chr 1
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.52T>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.104A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.42T>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.51T>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.430T>A
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.38T>A
  hgvsp: ENSP00000356982.5:p.Ile13Asn
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8397
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28421
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9583
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4265
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3922
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile13Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

1-161123828-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123828
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123828
    reference: chr 1
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.433C>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.54C>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.55C>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.45C>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.41C>T
  hgvsp: ENSP00000356982.5:p.Pro14Leu
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.101G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9591
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2952
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4643
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro14Leu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

1-161123829-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123829
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123829
    reference: chr 1
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.42G>C
  hgvsp: ENST00000368003.5:c.42G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.46G>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.56G>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.100C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.434G>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.55G>C
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4645
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9590
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro14Pro
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

1-161123829-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123829
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123829
    reference: chr 1
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.100C>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.42G>T
  hgvsp: ENST00000368003.5:c.42G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.434G>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.46G>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.55G>T
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.56G>T
  variant of: http://identifiers.org/hgnc/26941
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3923
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4645
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28427
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9590
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2952
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro14Pro
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

1-161123830-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 161123830
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 161123830
    reference: chr 1
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143222
  ensembl protein: ENSP00000356982
  ensembl transcript: ENST00000368003
  gene symbol: UFC1
  hgvsc: ENST00000368003.5:c.43G>C
  hgvsp: ENSP00000356982.5:p.Val15Leu
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000482672
  gene symbol: UFC1
  hgvsc: ENST00000482672.1:n.56G>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000473766
  gene symbol: UFC1
  hgvsc: ENST00000473766.1:n.47G>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000483191
  gene symbol: UFC1
  hgvsc: ENST00000483191.1:n.57G>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143222
  ensembl transcript: ENST00000467540
  gene symbol: UFC1
  hgvsc: ENST00000467540.1:n.435G>C
  variant of: http://identifiers.org/hgnc/26941
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000224985
  ensembl transcript: ENST00000420498
  gene symbol: RP11-297K8.2
  hgvsc: ENST00000420498.1:n.99C>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val15Leu
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 315
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13229
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 102
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 345
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1907
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8696
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2222
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7346
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4465
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26854
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3787
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66388
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.27e-1

DP
type: SiteQuality
SIO_000300: 1.864574e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.381e0

VQSLOD
type: SiteQuality
SIO_000300: -1.705e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.719e1

QD
type: SiteQuality
SIO_000300: 1.192e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeDepth
all individuals: 148
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 345
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 245
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 102
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1131
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 575
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3787
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26987
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1730
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3482
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7344
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2224
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8730
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.519756838905775e-4
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.105e-1

DP
type: SiteQuality
SIO_000300: 1.865384e6

MQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

FS
type: SiteQuality
SIO_000300: 9.330000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.482e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

MQ
type: SiteQuality
SIO_000300: 5.815e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.694e0

GenotypeDepth
all individuals: 147
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 358
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 453
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 538
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 102
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3479
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8744
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7347
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4490
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3792
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26961
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2223
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66326
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.22e-1

DP
type: SiteQuality
SIO_000300: 1.865244e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: -2.32e-1

FS
type: SiteQuality
SIO_000300: 6.52e-1

VQSLOD
type: SiteQuality
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.508386629660915e-5
allele num: 66296
num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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InbreedingCoeff
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QD
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VQSLOD
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BaseQRankSum
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DP
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FS
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 1.160900859066636e-4
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11504
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
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MQ
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.022609116189094e-5
allele num: 66168
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
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FS
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QD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
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DP
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SIO_000300: 1.869752e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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Latino
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MQ
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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FS
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ClippingRankSum
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VQSLOD
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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South Asian
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European (Non-Finnish)
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Other
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East Asian
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Latino
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MQ
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ClippingRankSum
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QD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Latino
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Other
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South Asian
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African
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European (Non-Finnish)
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InbreedingCoeff
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DP
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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QD
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.516346212167162e-5
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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DP
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InbreedingCoeff
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ReadPosRankSum
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FS
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VQSLOD
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QD
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MQ
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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allele num: 11492
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South Asian
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African
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allele frequency: 1.982553528945282e-4
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European (Non-Finnish)
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allele frequency: 2.881145179389197e-4
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FS
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VQSLOD
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QD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
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allele num: 65932
num of homozygotes: 0

Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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East Asian
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African
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VQSLOD
type: SiteQuality
SIO_000300: 5.83e-1

ClippingRankSum
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DP
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FS
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MQ
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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SIO_000300: 9.19e-1

QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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Other
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East Asian
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Latino
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South Asian
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BaseQRankSum
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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African
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Latino
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European (Non-Finnish)
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allele count: 0
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European (Finnish)
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East Asian
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QD
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ReadPosRankSum
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DP
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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Latino
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Other
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European (Non-Finnish)
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South Asian
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ClippingRankSum
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FS
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MQ
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DP
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2236
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.113216774666829e-5
allele num: 16358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.52e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.868818e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.811e0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

QD
type: SiteQuality
SIO_000300: 1.171e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-1

GenotypeDepth
all individuals: 831
bin: 6.75e1
variant carriers: 682

GenotypeDepth
all individuals: 17534
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variant carriers: 94

GenotypeDepth
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variant carriers: 533

GenotypeDepth
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variant carriers: 3143

GenotypeDepth
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variant carriers: 537

GenotypeDepth
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variant carriers: 33

GenotypeDepth
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variant carriers: 447

GenotypeDepth
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GenotypeDepth
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variant carriers: 603

GenotypeQuality
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variant carriers: 10031

GenotypeQuality
all individuals: 25
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variant carriers: 8

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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variant carriers: 14

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 3061
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7445
bin: 6.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 478
allele frequency: 7.238037552998183e-2
allele num: 6604
num of homozygotes: 22

Latino
type: Population
allele count: 937
allele frequency: 8.157757269719659e-2
allele num: 11486
num of homozygotes: 42

South Asian
type: Population
allele count: 2293
allele frequency: 1.404164115125536e-1
allele num: 16330
num of homozygotes: 159

European (Non-Finnish)
type: Population
allele count: 5087
allele frequency: 7.726071504510798e-2
allele num: 65842
num of homozygotes: 191

African
type: Population
allele count: 1171
allele frequency: 1.163090981326977e-1
allele num: 10068
num of homozygotes: 69

East Asian
type: Population
allele count: 532
allele frequency: 6.194690265486726e-2
allele num: 8588
num of homozygotes: 19

Other
type: Population
allele count: 79
allele frequency: 8.856502242152467e-2
allele num: 892
num of homozygotes: 6

DP
type: SiteQuality
SIO_000300: 2.371019e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.137e0

VQSLOD
type: SiteQuality
SIO_000300: 6.64e0

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.354e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.25e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 11
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.140997297961189e-5
allele num: 16284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.249e1

VQSLOD
type: SiteQuality
SIO_000300: 3.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.12e-1

DP
type: SiteQuality
SIO_000300: 1.85573e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.201e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.82e-1

GenotypeDepth
all individuals: 3468
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variant carriers: 0

GenotypeDepth
all individuals: 120
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
all individuals: 33
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GenotypeQuality
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GenotypeQuality
all individuals: 11
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4385
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GenotypeQuality
all individuals: 28913
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16276
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.940357852882704e-5
allele num: 10060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65806
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.686e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.058e0

MQRankSum
type: SiteQuality
SIO_000300: 3.84e-1

FS
type: SiteQuality
SIO_000300: 3.3675e1

DP
type: SiteQuality
SIO_000300: 1.855492e6

MQ
type: SiteQuality
SIO_000300: 5.896e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

GenotypeDepth
all individuals: 59
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variant carriers: 1

GenotypeDepth
all individuals: 301
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.111e0

MQ
type: SiteQuality
SIO_000300: 5.829e1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.163e0

MQRankSum
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SIO_000300: -1.231e0

ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

QD
type: SiteQuality
SIO_000300: 1.401e1

DP
type: SiteQuality
SIO_000300: 1.854375e6

GenotypeDepth
all individuals: 1821
bin: 4.75e1
variant carriers: 3

GenotypeDepth
all individuals: 20918
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variant carriers: 2

GenotypeDepth
all individuals: 3466
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GenotypeDepth
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 1

GenotypeDepth
all individuals: 11406
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GenotypeDepth
all individuals: 35
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GenotypeDepth
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GenotypeDepth
all individuals: 26
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GenotypeQuality
all individuals: 6413
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variant carriers: 34

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 90
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 35
allele frequency: 2.169600793454005e-3
allele num: 16132
num of homozygotes: 1

DP
type: SiteQuality
SIO_000300: 1.850386e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.01e-2

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.577e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.067e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
all individuals: 67
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
all individuals: 3459
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Other
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DP
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ReadPosRankSum
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MQ
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VQSLOD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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South Asian
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European (Finnish)
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African
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Other
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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MQ
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QD
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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QD
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ReadPosRankSum
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DP
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MQ
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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Other
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European (Finnish)
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QD
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ReadPosRankSum
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FS
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MQ
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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Latino
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African
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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QD
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DP
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GenotypeDepth
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GenotypeQuality
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Latino
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African
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South Asian
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European (Non-Finnish)
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QD
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FS
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ReadPosRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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Latino
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Other
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African
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European (Non-Finnish)
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South Asian
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East Asian
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FS
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MQRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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MQ
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VQSLOD
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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allele num: 12922
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European (Finnish)
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East Asian
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African
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FS
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ClippingRankSum
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MQ
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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East Asian
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Latino
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Other
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DP
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QD
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MQRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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Other
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East Asian
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MQ
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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QD
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MQRankSum
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FS
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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East Asian
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African
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Other
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European (Non-Finnish)
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Other
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African
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European (Finnish)
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Latino
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MQ
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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VQSLOD
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FS
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.137353328731882e-5
allele num: 63748
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 4.391357807834182e-4
allele num: 11386
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East Asian
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VQSLOD
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QD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 63666
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Other
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DP
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QD
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MQ
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ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

East Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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African
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allele frequency: 0.0e0
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DP
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.14911037631869e-5
allele num: 63510
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MQ
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QD
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ReadPosRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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South Asian
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QD
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VQSLOD
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MQ
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FS
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ReadPosRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

Latino
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African
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European (Finnish)
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East Asian
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South Asian
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Other
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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DP
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QD
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MQRankSum
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FS
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BaseQRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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African
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European (Non-Finnish)
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European (Finnish)
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East Asian
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FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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ClippingRankSum
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DP
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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African
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East Asian
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allele frequency: 2.353494939985879e-4
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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DP
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QD
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VQSLOD
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BaseQRankSum
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Other
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African
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European (Non-Finnish)
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allele num: 62906
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Latino
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East Asian
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South Asian
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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DP
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 9738
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East Asian
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South Asian
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allele frequency: 3.090234857849196e-4
allele num: 9708
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Latino
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European (Finnish)
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European (Non-Finnish)
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Other
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VQSLOD
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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QD
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MQ
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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DP
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QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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East Asian
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Other
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FS
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InbreedingCoeff
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MQRankSum
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QD
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VQSLOD
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MQ
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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South Asian
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African
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Other
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MQRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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QD
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East Asian
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European (Finnish)
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Latino
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South Asian
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Other
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African
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European (Non-Finnish)
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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FS
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DP
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ReadPosRankSum
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QD
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European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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African
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South Asian
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InbreedingCoeff
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DP
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QD
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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East Asian
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Other
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South Asian
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allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

FS
type: SiteQuality
SIO_000300: 7.558e0

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.861e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.273904e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

QD
type: SiteQuality
SIO_000300: 1.258e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730403183941858e-4
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 73
allele frequency: 7.03953712632594e-3
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

FS
type: SiteQuality
SIO_000300: 3.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.279306e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.759e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.072e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 2.292031e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 8.789999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

MQRankSum
type: SiteQuality
SIO_000300: -6.44e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070908207867897e-5
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.46e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

DP
type: SiteQuality
SIO_000300: 2.295158e6

QD
type: SiteQuality
SIO_000300: 1.575e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.613e0

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.092e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.595e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.78e-1

QD
type: SiteQuality
SIO_000300: 1.736e1

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.08e-1

DP
type: SiteQuality
SIO_000300: 2.295664e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-1

DP
type: SiteQuality
SIO_000300: 2.300456e6

MQRankSum
type: SiteQuality
SIO_000300: 6.81e-1

QD
type: SiteQuality
SIO_000300: 1.601e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.19e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3906
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2642
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.303517e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.839e-1

QD
type: SiteQuality
SIO_000300: 1.35e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28378
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4631
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3910
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.779010633379565e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.43e-1

FS
type: SiteQuality
SIO_000300: 1.378e0

DP
type: SiteQuality
SIO_000300: 2.304591e6

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

QD
type: SiteQuality
SIO_000300: 1.418e1

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2949
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4173
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3920
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.535e0

MQRankSum
type: SiteQuality
SIO_000300: -4.54e-1

FS
type: SiteQuality
SIO_000300: 2.159e0

VQSLOD
type: SiteQuality
SIO_000300: 6.04e-1

DP
type: SiteQuality
SIO_000300: 2.306789e6

MQ
type: SiteQuality
SIO_000300: 5.913e1

QD
type: SiteQuality
SIO_000300: 1.45e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.150817686250757e-3
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 4.348217230935317e-4
allele num: 66694
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.311258278145695e-3
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

QD
type: SiteQuality
SIO_000300: 1.344e1

DP
type: SiteQuality
SIO_000300: 2.309096e6

VQSLOD
type: SiteQuality
SIO_000300: 2.99e0

FS
type: SiteQuality
SIO_000300: 6.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.82e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28415
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998590662388677e-5
allele num: 66698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.984e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: -3.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.521e0

FS
type: SiteQuality
SIO_000300: 4.832e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-1

DP
type: SiteQuality
SIO_000300: 2.30863e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 5.52e0

GenotypeQuality
all individuals: 39
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3921
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 4.254e0

MQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

VQSLOD
type: SiteQuality
SIO_000300: 4.15e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.008e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.309142e6

QD
type: SiteQuality
SIO_000300: 1.453e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4180
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 2655
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.161e0

FS
type: SiteQuality
SIO_000300: 5.235e0

DP
type: SiteQuality
SIO_000300: 2.309366e6

MQRankSum
type: SiteQuality
SIO_000300: -5.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.85e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

QD
type: SiteQuality
SIO_000300: 1.373e1

VQSLOD
type: SiteQuality
SIO_000300: -1.078e0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9593
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2655
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2952
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49667246237784e-5
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

DP
type: SiteQuality
SIO_000300: 2.309585e6

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.332e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.82e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.833e0

GenotypeQuality
all individuals: 2952
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2655
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.399999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.309688e6

FS
type: SiteQuality
SIO_000300: 3.698e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.064e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.788e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: 2.84e-1

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2954
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2657
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 2.309977e6

QD
type: SiteQuality
SIO_000300: 1.221e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3922
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28421
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4179
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

FS
type: SiteQuality
SIO_000300: 1.053e0

VQSLOD
type: SiteQuality
SIO_000300: 8.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.99e-1

QD
type: SiteQuality
SIO_000300: 1.355e1

MQRankSum
type: SiteQuality
SIO_000300: -3.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.310295e6

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3923
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2952
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2658
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4263
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28427
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

QD
type: SiteQuality
SIO_000300: 1.37e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

DP
type: SiteQuality
SIO_000300: 2.310578e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4263
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2658
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.310578e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

QD
type: SiteQuality
SIO_000300: 1.37e1

MQ
type: SiteQuality
SIO_000300: 5.957e1